CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92082
KRH34704

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G16440.1	KRG92082	AT5G04510.1	16973627
AT1G16440.1	KRH34704	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13830	Soybean	cytosol	92.83	94.44
VIT_19s0085g01140.t01	Wine grape	cytosol	59.39	78.91
PGSC0003DMT400025008	Potato	cytosol	59.04	76.89
Solyc12g017390.1.1	Tomato	cytosol	59.56	74.73
Bra026056.1-P	Field mustard	cytosol	54.44	72.01
CDY33329	Canola	cytosol	55.97	67.35
KRH44814	Soybean	cytosol	64.16	67.14
CDY35093	Canola	cytosol	56.48	64.9
AT1G16440.1	Thale cress	cytosol	54.78	64.33
GSMUA_Achr2P19230_001	Banana	cytosol	50.0	62.34
AT1G79250.2	Thale cress	cytosol	58.02	61.26
EER99999	Sorghum	cytosol, plastid	53.75	58.55
Zm00001d039282_P001	Maize	cytosol	49.49	58.0
HORVU5Hr1G108690.2	Barley	cytosol	50.51	57.7
Os01t0233800-01	Rice	plasma membrane	52.22	57.52
CDY42166	Canola	cytosol, plastid	55.8	57.47
Bra034743.1-P	Field mustard	cytosol, plastid	55.97	57.44
CDY08414	Canola	cytosol, plastid	55.97	57.44
TraesCS5D01G460900.1	Wheat	cytosol, mitochondrion	50.68	57.34
TraesCS5B01G459300.1	Wheat	cytosol	50.34	56.95
AT3G12690.2	Thale cress	cytosol	55.97	56.85
Bra038744.1-P	Field mustard	cytosol	54.95	56.29
TraesCS1A01G133200.1	Wheat	cytosol	52.9	55.96
CDY50542	Canola	cytosol	54.61	55.94
Zm00001d037782_P001	Maize	cytosol	52.39	55.62
TraesCS1B01G152700.1	Wheat	cytosol	52.56	55.6
HORVU1Hr1G031420.1	Barley	cytosol	52.39	55.32
Zm00001d015925_P001	Maize	cytosol	48.63	54.49
Os05t0237400-01	Rice	plasma membrane	53.24	54.36
OQU77686	Sorghum	cytosol	51.88	53.9
TraesCS3A01G157100.1	Wheat	cytosol	54.44	53.61
TraesCS5A01G450900.1	Wheat	plastid	52.05	53.6
TraesCS3B01G183500.2	Wheat	cytosol	54.95	53.49
OQU84819	Sorghum	cytosol	48.63	53.47
TraesCS3D01G164700.1	Wheat	cytosol	54.95	53.4
HORVU3Hr1G031930.2	Barley	cytosol	54.1	52.57
TraesCS1D01G124200.2	Wheat	cytosol	53.24	50.16
Bra008404.1-P	Field mustard	nucleus	54.95	50.0
KRH36626	Soybean	cytosol	51.71	49.84
KRH11623	Soybean	cytosol	49.32	48.9
KRH26592	Soybean	nucleus	36.18	46.8
KRH34744	Soybean	cytosol	32.76	46.38
KRG93211	Soybean	cytosol	48.29	46.24
KRH25188	Soybean	nucleus, plastid	34.3	46.1
KRH30493	Soybean	cytosol, plastid	34.64	46.03
KRG92038	Soybean	cytosol	32.94	45.73
KRG94078	Soybean	cytosol, plastid	48.46	45.01
KRH07149	Soybean	cytosol	48.29	44.85
KRH21098	Soybean	cytosol, plastid	33.28	43.14
KRH56632	Soybean	plastid	35.84	43.03
KRH22717	Soybean	nucleus	36.35	42.86
GSMUA_Achr5P06950_001	Banana	cytosol, mitochondrion	49.49	42.46
KRH03726	Soybean	plastid	35.49	42.45
KRH63005	Soybean	nucleus	35.15	42.21
KRH59216	Soybean	cytosol	32.94	41.96
KRH43840	Soybean	cytosol	31.91	40.48
KRH48818	Soybean	cytosol	50.0	38.4
KRH66511	Soybean	nucleus	49.83	38.27
KRH01064	Soybean	cytosol	50.0	38.15
KRH40174	Soybean	cytosol	49.32	37.73
KRH13630	Soybean	nucleus	30.55	37.45
KRH62499	Soybean	cytosol	45.22	32.04
KRH56412	Soybean	cytosol	45.22	31.74
KRH32674	Soybean	cytosol	45.22	30.71
KRH23770	Soybean	cytosol	42.49	30.63
KRH30833	Soybean	cytosol	45.22	30.6
KRH67882	Soybean	cytosol	45.39	30.54
KRG96169	Soybean	cytosol	44.88	30.3

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100784301	MapMan:18.4.6.5	Gene3D:3.30.200.20	EMBL:ACUP02004870	EnsemblPlantsGene:GLYMA_08G160400
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	UniProt:K7L727	EnsemblPlants:KRH43612	ProteinID:KRH43612	ProteinID:KRH43612.1
ProteinID:KRH43613.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351
PANTHER:PTHR24351:SF55	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294E24B
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:12417979..12423130

Molecular Weight (calculated)

64796.5 Da

IEP (calculated)

9.113

GRAVY (calculated)

-0.556

Length

586 amino acids

Sequence
(BLAST)

001: MTSNPVKMPD LRETKMEHKL SEGAHPSAHS SCSNSGNNSP THPKNVNQEP KDTSTTTTTT NVHNSGNETG HVDQASKTDQ AKLEGKSRPQ KLIPPSRNIS
101: DFNPQQHQSP STNKPNSNSD HPPHAKAMSV STPQTKTSST NNLQGQGSGA SSRSDSLEST SAPIRPHTGG DVRWEAINMI SRVGPLNLSH FRLLKRIGYG
201: DIGSVYLVEL KGTRTYFAMK VMDKAALISR NKLLRAQTER EILGLLDHPF LPTLYSYFET RKFYCLVMEF CSGGDLHSLR QKQPNKCFTE EAARFYASEV
301: LLALEYLHML GIVYRDLKPE NLLVRDEGHI MLSDFDLSLR CSVNPTLVKS SSAHASNSSS GSNNDVGSIL TDDQAVQSTT QVSSFFPRIL PSKKNRKAKS
401: DFGILVGGGR LPELMAEPTN VRSMSFVGTH EYLAPEIIKG EGHGSAVDWW TFGIFLYELL HGTTPFKGSG YKATLFNVVG QPLRFPETPQ VSAVARDLIR
501: GLLVKEPQKR IAYKRGATEI KQHPFFEGMN WALVRSATPP HIPEVIDFSK YASKDTAPPP DKKMADIAND KHSNSATDSY IEFEYF

Best Arabidopsis Sequence Match ( AT1G79250.1 )
(BLAST)

001: MLTKPGKKLD SSESTHHTTS SNYPPLDIVH QTPQPRKEMQ QKPLFDPKKM DNLIKPEPAG FTNHHRPNPS PKIPSSPGSN MTESQSNLNT KPNNNNSNNN
101: SNMSSRSNSI ESTSSNPSKP HTGGDIRWDA VNTLTSKGVQ LGISDFRLLK RLGYGDIGSV YLVELRGTIT YFAMKVMDKA SLASRNKLLR AQTEREILSQ
201: LDHPFLPTLY SHFETDKFYC LVMEFCGGGN LYSLRQKQPN KCFTEDAARF FASEVLLALE YLHMLGIVYR DLKPENVLVR DDGHIMLSDF DLSLRCSVSP
301: TLVKSSSVHA AGGGSGSSRP VGLIDEDAAV QGCIQPSTFF PRILQSSKKN RKAKSDFGLF VNGSMPELMA EPTNVKSMSF VGTHEYLAPE IIRGEGHGSA
401: VDWWTFGIFI YELLYGATPF KGQGNRATLH NVIGQALRFP EVPHVSSAAR DLIKGLLVKE PQKRIAYKRG ATEIKQHPFF EGVNWALIRS ATPPHVPEPV
501: DFSCYASKDK ESMAAVDGGG KKNNNGAGGG CSTGGGDNKP NGDCNDPDYI DFEYF

Arabidopsis Description

AGC1-7Serine/threonine-protein kinase AGC1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.