CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92082
KRH34704

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26700.1	KRG92082	AT5G04510.1	16973627
AT2G26700.1	KRH34704	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56632	Soybean	plastid	94.08	94.47
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	75.92	79.15
KRH63005	Soybean	nucleus	72.04	72.34
Solyc12g006690.1.1	Tomato	nucleus, plastid	66.73	70.78
PGSC0003DMT400053292	Potato	cytosol, plastid	66.33	70.04
GSMUA_Achr10P...	Banana	nucleus	56.12	66.91
GSMUA_Achr7P09970_001	Banana	nucleus	57.76	66.9
EES00213	Sorghum	cytosol, plastid	60.41	59.92
Os01t0174700-01	Rice	cytosol	59.39	59.03
CDY48186	Canola	cytosol	58.78	59.02
TraesCS3B01G147300.1	Wheat	cytosol	57.76	58.35
TraesCS3A01G128200.1	Wheat	cytosol	57.76	58.35
Zm00001d039654_P001	Maize	cytosol	58.98	58.03
TraesCS3D01G129100.1	Wheat	cytosol	57.35	57.82
AT2G26700.1	Thale cress	cytosol, plastid	60.41	56.38
Bra034312.1-P	Field mustard	cytosol	59.39	55.01
HORVU3Hr1G024030.1	Barley	cytosol	58.37	54.06
KRH21098	Soybean	cytosol, plastid	43.88	47.57
KRH26592	Soybean	nucleus	42.24	45.7
KRH34744	Soybean	cytosol	38.57	45.65
KRG92038	Soybean	cytosol	39.18	45.5
KRH59216	Soybean	cytosol	42.65	45.43
KRH25188	Soybean	nucleus, plastid	39.8	44.72
KRH30493	Soybean	cytosol, plastid	39.8	44.22
KRH22717	Soybean	nucleus	42.45	41.85
KRH43840	Soybean	cytosol	39.39	41.77
KRH13630	Soybean	nucleus	39.59	40.59
KRH36626	Soybean	cytosol	47.76	38.49
KRH11623	Soybean	cytosol	45.92	38.07
KRH44814	Soybean	cytosol	42.45	37.14
KRG93211	Soybean	cytosol	45.51	36.44
KRH13830	Soybean	cytosol	42.24	35.94
KRG94078	Soybean	cytosol, plastid	46.12	35.82
KRH07149	Soybean	cytosol	46.12	35.82
KRH43612	Soybean	cytosol	42.45	35.49
CDX77055	Canola	cytosol	58.57	33.41
KRH48818	Soybean	cytosol	47.35	30.41
KRH66511	Soybean	nucleus	47.14	30.28
KRH40174	Soybean	cytosol	46.94	30.03
KRH01064	Soybean	cytosol	46.94	29.95
KRH62499	Soybean	cytosol	46.12	27.33
KRH56412	Soybean	cytosol	45.71	26.83
KRH32674	Soybean	cytosol	45.71	25.96
KRH30833	Soybean	cytosol	45.71	25.87
KRH23770	Soybean	cytosol	42.45	25.58
KRH67882	Soybean	cytosol	44.69	25.14
KRG96169	Soybean	cytosol	44.49	25.12

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100775924	MapMan:11.2.4.1.2	MapMan:18.4.6.5	Gene3D:3.30.200.20	EMBL:ACUP02010358
ncoils:Coil	EnsemblPlantsGene:GLYMA_17G117300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1MUB6	InterPro:IPR000719	EnsemblPlants:KRH03726
ProteinID:KRH03726	ProteinID:KRH03726.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24351	PANTHER:PTHR24351:SF70	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000233E218	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:9242281..9244763

Molecular Weight (calculated)

55625.4 Da

IEP (calculated)

9.779

GRAVY (calculated)

-0.341

Length

490 amino acids

Sequence
(BLAST)

001: MLSAAPSMNT NTSVITAITT TRDEPDYDSS SSSITVPESS RSWMTNLSFG SRRRRSSVSV CSSTAESPHA KPHKANHAAW EAMRRLRRDK GQVGLDHFRL
101: LRRLGSGDIG NVYLCQIRNP IVGLPQCFYA MKVVDREALA IRKKLQRAEM EKEILAMLDH PFLPTLYTEF DASHYSCLLM EFCPGGDLYA ARQRQPGKRF
201: SIASSKFYAA ETLLALEYLH MMGIVYRDLK PENVLVREDG HIMLTDFDLS LKCDVVPKLL RSKTRLERSI KSTKRSMPAC TAPMQPVLSC FLSSSRKKKK
301: ATVTTVIREN VEVEENDPEL VAEPIDAKSK SFVGTHEYLA PEVILGQGHG SAVDWWTFGV FLYEMLYGRT PFKGENNEKT LVNILKQPLA FPRIVVGTSK
401: EFEEMVNVQD LISKLLVKNP SKRIGSLMGS VEIKRHEFFK GVNWALIRAV RPPEVPSEMN KLRSRVLLPK LSKTDRDQPY QLRSHHFEYF

Best Arabidopsis Sequence Match ( AT2G26700.1 )
(BLAST)

001: MANSSIFYKD NESDYESSTV GPDSSRRTSW LSSSFTASPS CSSISHLSNH GLNSYNQSKP HKANQVAWEA MARLRRCCGR AVGLEHFRLL KRLGSGDIGS
101: VYLCQIRGSP ETAFYAMKVV DKEAVAVKKK LGRAEMEKKI LGMLDHPFCP TLYAAFEASH YSFLVMEYCP GGDLYAVRLR QPSKRFTISS TRFYAAETLV
201: ALEYLHMMGI VYRDLKPENV LIREDGHVML SDFDLSFKCD VVPQFLSDND RDRGHQEDDD DISIRRKCST PSCTTTPLNP VISCFSPTSS RRRKKNVVTT
301: TIHENAAGTS DSVKSNDVSR TFSRSPSSCS RVSNGLRDIS GGCPSIFAEP INARSKSFVG THEYLAPEVI SGQGHGSAVD WWTYGIFLYE MIFGRTPFKG
401: DNNEKTLVNI LKAPLTFPKV IVNSPKEYED MVNAQDLIIK LLVKNPKKRL GSLKGSIEIK RHEFFEGVNW ALIRSIKPPW VPKEETSHKT KGDNRSVNYY
501: LPPRFMMSRK ERNEPYHVSN YFDYF

Arabidopsis Description

PID2Protein kinase PINOID 2 [Source:UniProtKB/Swiss-Prot;Acc:Q64FQ2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.