CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
vacuole 1
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92082
KRH34704

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26700.1	KRG92082	AT5G04510.1	16973627
AT2G26700.1	KRH34704	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	71.93	74.68
KRH56632	Soybean	plastid	73.16	73.16
KRH03726	Soybean	plastid	72.34	72.04
Solyc12g006690.1.1	Tomato	nucleus, plastid	62.91	66.45
PGSC0003DMT400053292	Potato	cytosol, plastid	62.7	65.95
GSMUA_Achr10P...	Banana	nucleus	55.33	65.69
GSMUA_Achr7P09970_001	Banana	nucleus	56.56	65.25
CDY48186	Canola	cytosol	58.2	58.2
Os01t0174700-01	Rice	cytosol	57.58	57.0
TraesCS3A01G128200.1	Wheat	cytosol	55.53	55.88
EES00213	Sorghum	cytosol, plastid	56.56	55.87
AT2G26700.1	Thale cress	cytosol, plastid	59.84	55.62
TraesCS3B01G147300.1	Wheat	cytosol	54.92	55.26
TraesCS3D01G129100.1	Wheat	cytosol	54.92	55.14
Bra034312.1-P	Field mustard	cytosol	59.02	54.44
Zm00001d039654_P001	Maize	cytosol	55.53	54.42
HORVU3Hr1G024030.1	Barley	cytosol	56.15	51.8
KRH21098	Soybean	cytosol, plastid	44.26	47.79
KRH59216	Soybean	cytosol	43.65	46.3
KRG92038	Soybean	cytosol	39.55	45.73
KRH34744	Soybean	cytosol	38.52	45.41
KRH25188	Soybean	nucleus, plastid	40.16	44.95
KRH30493	Soybean	cytosol, plastid	39.96	44.22
KRH26592	Soybean	nucleus	40.98	44.15
KRH43840	Soybean	cytosol	41.19	43.51
KRH13630	Soybean	nucleus	41.39	42.26
KRH22717	Soybean	nucleus	41.39	40.64
KRH44814	Soybean	cytosol	41.8	36.43
KRH36626	Soybean	cytosol	44.88	36.02
KRH13830	Soybean	cytosol	41.8	35.42
KRH11623	Soybean	cytosol	42.83	35.36
KRH43612	Soybean	cytosol	42.21	35.15
KRG93211	Soybean	cytosol	43.85	34.97
KRG94078	Soybean	cytosol, plastid	44.47	34.39
KRH07149	Soybean	cytosol	44.47	34.39
CDX77055	Canola	cytosol	57.99	32.95
KRH48818	Soybean	cytosol	45.7	29.23
KRH66511	Soybean	nucleus	45.49	29.1
KRH01064	Soybean	cytosol	44.47	28.26
KRH40174	Soybean	cytosol	43.85	27.94
KRH62499	Soybean	cytosol	44.06	26.0
KRH56412	Soybean	cytosol	43.65	25.51
KRH23770	Soybean	cytosol	42.21	25.34
KRH30833	Soybean	cytosol	44.47	25.06
KRH32674	Soybean	cytosol	44.26	25.03
KRG96169	Soybean	cytosol	43.24	24.31
KRH67882	Soybean	cytosol	43.24	24.23

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100787216	MapMan:11.2.4.1.2	MapMan:18.4.6.5	Gene3D:3.30.200.20	EMBL:ACUP02002542
ncoils:Coil	EnsemblPlantsGene:GLYMA_04G148400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1JW56	InterPro:IPR000719	EnsemblPlants:KRH63005
ProteinID:KRH63005	ProteinID:KRH63005.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24351	PANTHER:PTHR24351:SF70	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00023BFA07	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:30732471..30735438

Molecular Weight (calculated)

54934.8 Da

IEP (calculated)

9.168

GRAVY (calculated)

-0.370

Length

488 amino acids

Sequence
(BLAST)

001: MSMASTTRDE SSDNDSTCSS ITLADSTRSW LSTFSFRRSS SSNSSSLPLC AAAPDTTKSA SWEAMRRLRL DTGGIGLDNF RLLRRLGSGD IGNVYLCQIQ
101: NSMVGRPQSL YYAMKVVDRE ALAVRKKLQR AEMEKQILAM MDHPFLPTLY AAFDASHYSC FVMDFCPGGD LFSARQRQPG KRFTISSTKF YAAETLVALE
201: YLHMKGIVYR DLKPENVLIR EDGHIMLSDF DLCLKCDVVP KLLRSKTSSE SSVKTRRSSA PSCVAAPMHS CFSASSKRKK VVTTAIIREN MDVYEDQSQH
301: KGHDYCTSGL GEHDTEIVAE PINARSKSFV GTHEYLAPEV ISGNGHGSAV DWWTFGVFLY EMLYGRTPFK GENNEKTLMN ILKQPLAFPR VSSVSSSSKE
401: FEEMVKVQDL ISKLLVKNPK KRIGCCMGSV EIKRHEFFKG VNWALIRSVR PPEVPAELNK IRSRVSLQKL SKKDKDQPYQ ITHHFDYF

Best Arabidopsis Sequence Match ( AT2G26700.1 )
(BLAST)

001: MANSSIFYKD NESDYESSTV GPDSSRRTSW LSSSFTASPS CSSISHLSNH GLNSYNQSKP HKANQVAWEA MARLRRCCGR AVGLEHFRLL KRLGSGDIGS
101: VYLCQIRGSP ETAFYAMKVV DKEAVAVKKK LGRAEMEKKI LGMLDHPFCP TLYAAFEASH YSFLVMEYCP GGDLYAVRLR QPSKRFTISS TRFYAAETLV
201: ALEYLHMMGI VYRDLKPENV LIREDGHVML SDFDLSFKCD VVPQFLSDND RDRGHQEDDD DISIRRKCST PSCTTTPLNP VISCFSPTSS RRRKKNVVTT
301: TIHENAAGTS DSVKSNDVSR TFSRSPSSCS RVSNGLRDIS GGCPSIFAEP INARSKSFVG THEYLAPEVI SGQGHGSAVD WWTYGIFLYE MIFGRTPFKG
401: DNNEKTLVNI LKAPLTFPKV IVNSPKEYED MVNAQDLIIK LLVKNPKKRL GSLKGSIEIK RHEFFEGVNW ALIRSIKPPW VPKEETSHKT KGDNRSVNYY
501: LPPRFMMSRK ERNEPYHVSN YFDYF

Arabidopsis Description

PID2Protein kinase PINOID 2 [Source:UniProtKB/Swiss-Prot;Acc:Q64FQ2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.