Factsheet for Solyc12g006690.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
vacuole 1
nucleus 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g071750.2.1
Solyc11g007760.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26700.1	Solyc03g071750.2.1	AT5G04510.1	16973627
AT2G26700.1	Solyc11g007760.1.1	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053292	Potato	cytosol, plastid	97.84	97.41
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	74.24	72.98
KRH56632	Soybean	plastid	71.64	67.83
KRH03726	Soybean	plastid	70.78	66.73
GSMUA_Achr10P...	Banana	nucleus	59.09	66.42
GSMUA_Achr7P09970_001	Banana	nucleus	58.87	64.3
KRH63005	Soybean	nucleus	66.45	62.91
CDY48186	Canola	cytosol	61.9	58.61
EES00213	Sorghum	cytosol, plastid	61.69	57.69
Os01t0174700-01	Rice	cytosol	60.39	56.59
TraesCS3B01G147300.1	Wheat	cytosol	59.09	56.29
TraesCS3D01G129100.1	Wheat	cytosol	58.87	55.97
TraesCS3A01G128200.1	Wheat	cytosol	58.66	55.88
AT2G26700.1	Thale cress	cytosol, plastid	63.2	55.62
Zm00001d039654_P001	Maize	cytosol	59.74	55.42
Bra034312.1-P	Field mustard	cytosol	62.34	54.44
HORVU3Hr1G024030.1	Barley	cytosol	59.09	51.61
Solyc12g017390.1.1	Tomato	cytosol	46.32	45.82
Solyc11g067080.1.1	Tomato	nucleus	42.42	42.42
Solyc02g087510.2.1	Tomato	cytosol	46.97	41.73
Solyc11g007250.1.1	Tomato	nucleus	40.48	40.74
Solyc07g065710.2.1	Tomato	plastid	50.43	38.58
Solyc07g056400.1.1	Tomato	nucleus	39.83	38.1
Solyc04g015130.2.1	Tomato	cytosol, plastid	50.0	38.06
Solyc10g005770.2.1	Tomato	plastid	50.22	37.85
Solyc02g093360.2.1	Tomato	cytosol	49.35	36.48
Solyc02g067830.2.1	Tomato	cytosol	49.35	36.36
CDX77055	Canola	cytosol	61.26	32.95
Solyc01g090240.2.1	Tomato	cytosol	48.7	32.14
Solyc10g038190.1.1	Tomato	cytosol	46.54	30.85
Solyc11g067070.1.1	Tomato	cytosol	46.97	25.96
Solyc06g074480.2.1	Tomato	cytosol	47.4	25.61
Solyc10g083500.1.1	Tomato	nucleus	46.97	21.59
Solyc09g009380.2.1	Tomato	cytosol	46.54	21.08

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.2.4.1.2	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000003	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009790	GO:GO:0009791	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	GO:GO:0048825	InterPro:IPR000719	UniProt:K4DBK6
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF70
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc12g006690.1	EnsemblPlants:Solyc12g006690.1.1
UniParc:UPI000276A954	SEG:seg	:	:	:	:

Description

Protein kinase PINOID 2 [Source:Projected from Arabidopsis thaliana (AT2G26700) UniProtKB/Swiss-Prot;Acc:Q64FQ2]

Coordinates

chr12:-:1152815..1155108

Molecular Weight (calculated)

52740.5 Da

IEP (calculated)

9.188

GRAVY (calculated)

-0.406

Length

462 amino acids

Sequence
(BLAST)

001: MATTNRDESD KDSTASSSIT MPESSRRSWM SSTNLSSFSS RRSSISLCNE NPYFSNSHKP HKSNQISWEL IRRIRVESGQ IKLEHFRLLR RVGGGDIGSV
101: YLCEIRNPVV GLPQCFYAMK VVDREAVEIR KKLQRGEMEK EILGIIDHPF LPTLYAQFEA SHYSCLVMEY CPGGDLHAVR QRQPGKRFSI SSAKFYAAEI
201: LLALEYLHMM GIVYRDLKPE NVLVRSDGHI MLSDFDLSFK CDEVVPTLVK SKTTKSIAKT PRNSYCAMPI QPVLSCFLSQ KTEQNHENQE EDQEIVAEPI
301: NARSKSFVGT HEYLAPEVIS GQGHGSAVDW WTLGVFLYEL IFGTTPFKGE NNEKTLVNIL KKPLTFPRIA ISSSKEYEEM VKVQDLISRL LVKNPKKRIG
401: SLQGSVEIKK HEFFKGVNWA LIRSIKPPQV PNDLVKMRGV VPKLSKKQRE EPYQIPQYFD YF

Best Arabidopsis Sequence Match ( AT2G26700.1 )
(BLAST)

001: MANSSIFYKD NESDYESSTV GPDSSRRTSW LSSSFTASPS CSSISHLSNH GLNSYNQSKP HKANQVAWEA MARLRRCCGR AVGLEHFRLL KRLGSGDIGS
101: VYLCQIRGSP ETAFYAMKVV DKEAVAVKKK LGRAEMEKKI LGMLDHPFCP TLYAAFEASH YSFLVMEYCP GGDLYAVRLR QPSKRFTISS TRFYAAETLV
201: ALEYLHMMGI VYRDLKPENV LIREDGHVML SDFDLSFKCD VVPQFLSDND RDRGHQEDDD DISIRRKCST PSCTTTPLNP VISCFSPTSS RRRKKNVVTT
301: TIHENAAGTS DSVKSNDVSR TFSRSPSSCS RVSNGLRDIS GGCPSIFAEP INARSKSFVG THEYLAPEVI SGQGHGSAVD WWTYGIFLYE MIFGRTPFKG
401: DNNEKTLVNI LKAPLTFPKV IVNSPKEYED MVNAQDLIIK LLVKNPKKRL GSLKGSIEIK RHEFFEGVNW ALIRSIKPPW VPKEETSHKT KGDNRSVNYY
501: LPPRFMMSRK ERNEPYHVSN YFDYF

Arabidopsis Description

PID2Protein kinase PINOID 2 [Source:UniProtKB/Swiss-Prot;Acc:Q64FQ2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.