Factsheet for Solyc03g071750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g067830.2.1
Solyc02g087510.2.1
Solyc02g093360.2.1
Solyc04g015130.2.1
Solyc07g056400.1.1
Solyc07g065710.2.1
Solyc09g009380.2.1
Solyc10g005770.2.1
Solyc10g083500.1.1
Solyc12g006690.1.1
Solyc12g017390.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G04510.1	Solyc12g017390.1.1	AT1G16440.1	16973627
AT5G04510.1	Solyc07g056400.1.1	AT1G53700.1	16973627
AT5G04510.1	Solyc12g006690.1.1	AT2G26700.1	16973627
AT5G04510.1	Solyc09g009380.2.1	AT2G36350.1	16973627
AT5G04510.1	Solyc10g083500.1.1	AT2G36350.1	16973627
AT5G04510.1	Solyc07g056400.1.1	AT3G14370.1	16973627
AT5G04510.1	Solyc02g067830.2.1	AT3G27580.1	16973627
AT5G04510.1	Solyc02g093360.2.1	AT3G27580.1	16973627
AT5G04510.1	Solyc04g015130.2.1	AT4G26610.1	16973627
AT5G04510.1	Solyc02g087510.2.1	AT5G40030.1	16973627
AT5G04510.1	Solyc07g065710.2.1	AT5G47750.1	16973627
AT5G04510.1	Solyc10g005770.2.1	AT5G47750.1	16973627
AT5G04510.1	Solyc07g065710.2.1	AT5G47750.1	21798944
AT5G04510.1	Solyc10g005770.2.1	AT5G47750.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043552	Potato	cytosol	97.72	98.54
Solyc11g007760.1.1	Tomato	cytosol	90.89	88.87
KRH34704	Soybean	cytosol	84.89	83.5
KRG92082	Soybean	cytosol	84.68	83.3
VIT_13s0074g00100.t01	Wine grape	cytosol	86.54	82.61
CDY41359	Canola	cytosol	82.4	81.72
AT3G10540.1	Thale cress	cytosol	81.78	81.28
Bra034125.1-P	Field mustard	cytosol	82.19	81.19
CDY68313	Canola	cytosol	77.43	80.95
CDX70218	Canola	cytosol	81.57	80.41
CDY44862	Canola	cytosol	81.37	80.37
CDY08594	Canola	cytosol	79.92	80.25
Bra029850.1-P	Field mustard	cytosol	79.92	80.25
AT5G04510.1	Thale cress	cytosol	81.57	80.24
Bra009447.1-P	Field mustard	cytosol	81.37	80.2
CDY00952	Canola	cytosol	79.3	79.3
GSMUA_Achr10P...	Banana	cytosol	74.12	71.6
GSMUA_Achr5P26030_001	Banana	cytosol	73.91	71.12
Os01t0872800-01	Rice	cytosol	71.43	69.28
Zm00001d042676_P001	Maize	cytosol	51.97	69.15
TraesCS3D01G376500.1	Wheat	cytosol	71.01	67.65
EES03961	Sorghum	cytosol	70.39	67.46
TraesCS3B01G415800.1	Wheat	cytosol	70.19	67.4
TraesCS3A01G383400.1	Wheat	cytosol, plastid	70.6	67.39
HORVU3Hr1G082260.4	Barley	cytosol	70.6	63.98
Solyc12g088820.1.1	Tomato	cytosol	27.12	26.31
Solyc04g078870.2.1	Tomato	cytosol	27.12	24.81
Solyc08g062670.2.1	Tomato	cytosol	25.88	24.04
Solyc03g095510.2.1	Tomato	cytosol	22.98	23.97
Solyc06g008330.1.1	Tomato	cytosol	25.26	23.78
Solyc09g066460.2.1	Tomato	cytosol	26.09	23.42
Solyc06g071210.2.1	Tomato	nucleus	22.57	23.39
Solyc10g074930.1.1	Tomato	cytosol, plastid	22.77	23.16
Solyc12g009010.1.1	Tomato	cytosol	24.22	22.99
Solyc09g090200.2.1	Tomato	nucleus	25.67	22.67
Solyc04g080170.2.1	Tomato	cytosol	26.71	11.91
Solyc03g083590.2.1	Tomato	cytosol	26.92	11.14
Solyc03g118530.2.1	Tomato	cytosol, plastid	26.29	9.81
Solyc06g068920.2.1	Tomato	cytosol, plastid	25.05	9.46

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.6.2	Gene3D:2.30.29.30	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR011993	UniProt:K4BHK4	InterPro:Kinase-like_dom_sf
InterPro:PDK1-typ_PH	PFAM:PF00069	PFAM:PF14593	InterPro:PH-like_dom_sf	PIRSF:PIRSF000654	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24356	PANTHER:PTHR24356:SF163	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF50729
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc03g071750.2	EnsemblPlants:Solyc03g071750.2.1	UniParc:UPI0002767BDB	:

Description

No Description!

Coordinates

chr3:+:18590458..18595179

Molecular Weight (calculated)

54322.5 Da

IEP (calculated)

8.279

GRAVY (calculated)

-0.481

Length

483 amino acids

Sequence
(BLAST)

001: MEQELDSKLR IENNLPNPQR SKSFAFRAPQ ENFTIQDFEL GKIYGVGSYS KVVRAKKKDT GNVYALKIMD KKFITKENKT AYVKLERIVL DQLDHPGIVR
101: LFFTFQDTFS LYMALESCEG GELFDQITRK GRLSEDEARF YAAEVADSLE YIHSMGLIHR DIKPENLLLT SDGRIKIADF GSVKPMQDSR ITVLPNAASD
201: DKACTFVGTA AYVPPEVLNS SPATFGNDLW ALGCTLYQML SGFSPFKDTS EWLIFQRIIA RDIRFPNYFS NEARDLIDQL LDIDPSRRPG AGPDGYASLK
301: NHPFFSGVDW DNLRLQTPPR LAAEPKGHST RTSGEDHDPS WNPSHIGDGS ARPNDGNGGT PSSSEANSVT RLASIDSFDS KWKQFLEPGE SVLMISNVKK
401: IQKLTSKKVQ LILTNKPKLI YVDPSKLVVK GNIIWSDNSN DLNIQVISPS QFKVCTPKKV MSFEDAKQRA MQWKKAIETL QNR

Best Arabidopsis Sequence Match ( AT5G04510.1 )
(BLAST)

001: MLAMEKEFDS KLVLQGNSSN GANVSRSKSF SFKAPQENFT SHDFEFGKIY GVGSYSKVVR AKKKETGTVY ALKIMDKKFI TKENKTAYVK LERIVLDQLE
101: HPGIIKLYFT FQDTSSLYMA LESCEGGELF DQITRKGRLS EDEARFYTAE VVDALEYIHS MGLIHRDIKP ENLLLTSDGH IKIADFGSVK PMQDSQITVL
201: PNAASDDKAC TFVGTAAYVP PEVLNSSPAT FGNDLWALGC TLYQMLSGTS PFKDASEWLI FQRIIARDIK FPNHFSEAAR DLIDRLLDTE PSRRPGAGSE
301: GYVALKRHPF FNGVDWKNLR SQTPPKLAPD PASQTASPER DDTHGSPWNL THIGDSLATQ NEGHSAPPTS SESSGSITRL ASIDSFDSRW QQFLEPGESV
401: LMISAVKKLQ KITSKKVQLI LTNKPKLIYV DPSKLVVKGN IIWSDNSNDL NVVVTSPSHF KICTPKKVLS FEDAKQRASV WKKAIETLQN R

Arabidopsis Description

PDPK13-phosphoinositide-dependent protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XF67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.