Factsheet for Bra009447.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005275.1-P
Bra005280.1-P
Bra005403.1-P
Bra021925.1-P
Bra024918.1-P
Bra025288.1-P
Bra025621.1-P
Bra026056.1-P
Bra026417.1-P
Bra027344.1-P
Bra034312.1-P
Bra039602.1-P
Bra040842.1-P
Bra041025.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G04510.1	Bra026056.1-P	AT1G16440.1	16973627
AT5G04510.1	Bra041025.1-P	AT1G53700.1	16973627
AT5G04510.1	Bra034312.1-P	AT2G26700.1	16973627
AT5G04510.1	Bra005403.1-P	AT2G34650.1	16601102
AT5G04510.1	Bra021925.1-P	AT2G34650.1	16601102
AT5G04510.1	Bra005275.1-P	AT2G36350.1	16973627
AT5G04510.1	Bra005280.1-P	AT2G36350.1	16973627
AT5G04510.1	Bra039602.1-P	AT2G36350.1	16973627
AT5G04510.1	Bra040842.1-P	AT2G36350.1	16973627
AT5G04510.1	Bra027344.1-P	AT3G14370.1	16973627
AT5G04510.1	Bra025288.1-P	AT3G27580.1	16973627
AT5G04510.1	Bra026417.1-P	AT4G26610.1	16973627
AT5G04510.1	Bra025621.1-P	AT5G40030.1	16973627
AT5G04510.1	Bra024918.1-P	AT5G47750.1	16973627
AT5G04510.1	Bra024918.1-P	AT5G47750.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70218	Canola	cytosol	99.39	99.39
CDY44862	Canola	cytosol	98.78	98.98
AT5G04510.1	Thale cress	cytosol	92.45	92.26
Bra034125.1-P	Field mustard	cytosol	89.39	89.57
Bra029850.1-P	Field mustard	cytosol	86.33	87.94
KRG92082	Soybean	cytosol	81.84	81.67
PGSC0003DMT400043552	Potato	cytosol	79.8	81.63
PGSC0003DMT400070360	Potato	cytosol	80.61	81.61
KRH34704	Soybean	cytosol	81.63	81.47
Solyc03g071750.2.1	Tomato	cytosol	80.2	81.37
VIT_13s0074g00100.t01	Wine grape	cytosol	83.27	80.63
Solyc11g007760.1.1	Tomato	cytosol	81.22	80.57
GSMUA_Achr10P...	Banana	cytosol	71.22	69.8
GSMUA_Achr5P26030_001	Banana	cytosol	71.02	69.32
Zm00001d042676_P001	Maize	cytosol	50.41	68.04
Os01t0872800-01	Rice	cytosol	68.98	67.87
EES03961	Sorghum	cytosol	67.96	66.07
TraesCS3D01G376500.1	Wheat	cytosol	67.76	65.48
TraesCS3B01G415800.1	Wheat	cytosol	66.94	65.21
TraesCS3A01G383400.1	Wheat	cytosol, plastid	67.14	65.02
HORVU3Hr1G082260.4	Barley	cytosol	67.96	62.48
Bra040471.1-P	Field mustard	cytosol	21.43	25.74
Bra040056.1-P	Field mustard	cytosol	21.22	25.55
Bra036723.1-P	Field mustard	cytosol	24.29	25.05
Bra029712.1-P	Field mustard	cytosol	22.86	24.78
Bra029713.1-P	Field mustard	cytosol	23.27	24.73
Bra040057.1-P	Field mustard	cytosol	23.06	24.57
Bra031468.1-P	Field mustard	cytosol	25.92	24.28
Bra011411.1-P	Field mustard	cytosol	25.51	24.08
Bra010763.1-P	Field mustard	cytosol	26.12	23.27
Bra032411.1-P	Field mustard	cytosol, plastid	26.33	22.95
Bra038998.1-P	Field mustard	cytosol	24.49	22.73
Bra014937.1-P	Field mustard	cytosol	25.51	22.69
Bra031123.1-P	Field mustard	cytosol	24.49	22.22
Bra015279.1-P	Field mustard	cytosol	23.06	19.93
Bra033404.1-P	Field mustard	cytosol	11.02	18.75
Bra018730.1-P	Field mustard	cytosol, mitochondrion	23.47	12.41
Bra033489.1-P	Field mustard	nucleus	25.31	12.27
Bra014042.1-P	Field mustard	cytosol	24.08	11.16
Bra010074.1-P	Field mustard	cytosol	24.49	10.67
Bra036473.1-P	Field mustard	nucleus	26.12	10.62
Bra014141.1-P	Field mustard	cytosol, plastid	24.9	10.06
Bra021278.1-P	Field mustard	cytosol, plastid	24.9	9.71
Bra022251.1-P	Field mustard	plastid	24.29	9.29

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.6.2	Gene3D:2.30.29.30	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra009447	EnsemblPlants:Bra009447.1	EnsemblPlants:Bra009447.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035091	GO:GO:0045860
GO:GO:0046777	GO:GO:0070300	InterPro:IPR000719	InterPro:IPR011993	InterPro:Kinase-like_dom_sf	UniProt:M4CZ00
InterPro:PDK1-typ_PH	PFAM:PF00069	PFAM:PF14593	InterPro:PH-like_dom_sf	PIRSF:PIRSF000654	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24356	PANTHER:PTHR24356:SF163	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF50729
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002547884	SEG:seg	:	:

Description

AT5G04510 (E=1e-247) PDK1, ATPDK1 | PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1); 3-phosphoinositide-dependent protein kinase/ kinase/ phosphoinositide binding / protein binding / protein kinase

Coordinates

chrA10:-:16680343..16682826

Molecular Weight (calculated)

54409.8 Da

IEP (calculated)

8.767

GRAVY (calculated)

-0.338

Length

490 amino acids

Sequence
(BLAST)

001: MLAMEKEFDS KLVLQGNGGS VSRSKSFSFK APQENFTIQD FQLGKIYGVG SYSKVVRAKK KESGTVYALK IMDKKFITKE NKTAYVKLER IVLDQLDHPG
101: IIKLFFTFQD SFSLYMALES CEGGELFDQI TRKGRLSEEE ARFYSAQVVD ALEYIHSMGL IHRDIKPENL LLTSDGHIKI ADFGSVKPMQ DSRITVLPNA
201: ASDDKACTFV GTAAYVPPEV LNSSPATFGN DLWALGCTIY QMLSGTSPFK DASEWLIFQR IIARDIKFPS HFSDAARDLI DRLLDTDPSR RPGAGSEGYA
301: ALKSHPFFMG IDWKNLRSQT PPKLAPDPAS QTASPEREDA HGSSPWNPTH IGDSSAAHND GHSAPSTPSE SSSGSITRLA SIDSFDSRWQ QFLEPGESVL
401: MISAVKKLQK ITSKKVQLIL TNKPKLIYVD PSKLVVKGNI IWSDNSNDLN VVVTSPSHFK ICTPKKVLSF EDVKQRALVW KKAIETLQNR

Best Arabidopsis Sequence Match ( AT5G04510.1 )
(BLAST)

001: MLAMEKEFDS KLVLQGNSSN GANVSRSKSF SFKAPQENFT SHDFEFGKIY GVGSYSKVVR AKKKETGTVY ALKIMDKKFI TKENKTAYVK LERIVLDQLE
101: HPGIIKLYFT FQDTSSLYMA LESCEGGELF DQITRKGRLS EDEARFYTAE VVDALEYIHS MGLIHRDIKP ENLLLTSDGH IKIADFGSVK PMQDSQITVL
201: PNAASDDKAC TFVGTAAYVP PEVLNSSPAT FGNDLWALGC TLYQMLSGTS PFKDASEWLI FQRIIARDIK FPNHFSEAAR DLIDRLLDTE PSRRPGAGSE
301: GYVALKRHPF FNGVDWKNLR SQTPPKLAPD PASQTASPER DDTHGSPWNL THIGDSLATQ NEGHSAPPTS SESSGSITRL ASIDSFDSRW QQFLEPGESV
401: LMISAVKKLQ KITSKKVQLI LTNKPKLIYV DPSKLVVKGN IIWSDNSNDL NVVVTSPSHF KICTPKKVLS FEDAKQRASV WKKAIETLQN R

Arabidopsis Description

PDPK13-phosphoinositide-dependent protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XF67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.