Factsheet for Bra025621.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009447.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G40030.1	Bra009447.1-P	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74407	Canola	cytosol, plastid	94.52	97.49
CDY30287	Canola	cytosol, plastid	98.99	97.21
AT5G40030.1	Thale cress	cytosol, plastid	92.09	90.98
PGSC0003DMT400003557	Potato	cytosol, plastid	71.2	67.5
Solyc02g087510.2.1	Tomato	cytosol	70.79	67.12
Bra035592.1-P	Field mustard	cytosol	47.26	64.36
VIT_14s0066g02140.t01	Wine grape	cytosol	70.18	64.31
Bra005275.1-P	Field mustard	cytosol	19.27	58.64
Bra026056.1-P	Field mustard	cytosol	50.3	55.98
Bra002868.1-P	Field mustard	cytosol, plastid	55.78	55.0
Bra028955.1-P	Field mustard	cytosol, plastid	54.77	54.88
Bra026417.1-P	Field mustard	cytosol	54.77	52.63
Bra024918.1-P	Field mustard	cytosol	58.01	51.62
Bra034743.1-P	Field mustard	cytosol, plastid	52.94	45.71
Bra038744.1-P	Field mustard	cytosol	52.94	45.63
Bra019427.1-P	Field mustard	cytosol, plastid	40.37	45.12
Bra025288.1-P	Field mustard	cytosol	53.35	44.73
Bra040842.1-P	Field mustard	cytosol	6.49	42.67
Bra039602.1-P	Field mustard	cytosol	6.49	42.67
Bra005403.1-P	Field mustard	cytosol	37.32	41.91
Bra021925.1-P	Field mustard	cytosol	37.12	41.69
Bra037631.1-P	Field mustard	cytosol	54.36	41.36
Bra004872.1-P	Field mustard	cytosol	55.58	39.09
Bra008404.1-P	Field mustard	nucleus	49.7	38.04
Bra034312.1-P	Field mustard	cytosol	40.57	37.81
Bra027344.1-P	Field mustard	nucleus	36.11	37.16
Bra041025.1-P	Field mustard	nucleus	35.5	35.57
Bra019641.1-P	Field mustard	cytosol	47.06	29.44
Bra005280.1-P	Field mustard	cytosol	52.13	28.94
Bra028538.1-P	Field mustard	cytosol	51.72	28.49
Bra009522.1-P	Field mustard	cytosol	49.7	27.34
Bra006955.1-P	Field mustard	cytosol	50.3	23.75
Bra026057.1-P	Field mustard	cytosol, nucleus, plastid	6.49	21.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra025621	EnsemblPlants:Bra025621.1	EnsemblPlants:Bra025621.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4EA14	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF84	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002544B54	SEG:seg	:	:

Description

AT5G40030 (E=1e-232) | protein kinase, putative

Coordinates

chrA04:-:7449137..7451050

Molecular Weight (calculated)

54786.3 Da

IEP (calculated)

7.694

GRAVY (calculated)

-0.356

Length

493 amino acids

Sequence
(BLAST)

001: MSRQTPNLES SHDSSSNADS SQASGSESFK PSSSNGSQDV RLNNSVSLSF CSSNSVSSEA NLDTNEAAFK RVFSPSKPHK GNDLRWDAIQ SVKCSKNEDL
101: GLGHFRLLKK LGCGDIGSVY LAELREMGCF FAMKVMDKGM LVGRKKLVRA QTEREILGLL DHPFLPTLYS HFETDKFSCL LMEFCSGGDL HILRQKQLGK
201: HFSEQAARFY ASEVLLALEY LHMMGVVYRD LKPENVMVRE DGHIMLSDFD LSLQSFASPT LIQSTSQPSC DIASYCVQPS CIVDPSCRLP IACIQPSCFK
301: PRFLNGKPRK ANKTEKGGSD SLPMLIAEPT DARSMSFVGT HEYLAPEIIR GDGHGSSVDW WTFGIFLYEL LTGKTPFKGN GNRETLFNVV GQPLKFPEGS
401: ISFAAKDLIR GLLAKDPKKR LGFKKGATEI KQHPFFNNVN WALIRSTNPP EIPKPIDLSI LNETLKSSVQ QQQEKHSQQS DSSSGLYLEF EFF

Best Arabidopsis Sequence Match ( AT5G40030.1 )
(BLAST)

001: MSKQTPNLES LQDCSSSNYN NANASPVSGS ASFKTSSNGS EDVRLNNSIS LSFCSSNSVS SEANLEKTQS FDANEANFKR VFAPSKPHKG NDLRWDAIQN
101: VKCSKNEDLG LGHFRLLKKL GCGDIGSVYL AELREMGCFF AMKVMDKGML IGRKKLVRAQ TEREILGLLD HPFLPTLYSH FETEKFSCLL MEFCSGGDLH
201: ILRQKQPGKH FSELAARFYA SEVLLALEYL HMMGVVYRDL KPENVMVRED GHIMLSDFDL SLQSFVSPTL IQSTSQPSCH IASYCIQPPC IDPSCKLPVA
301: CIQPSCFKPR FLNNKPRKAK TEKAGSDSLP MLIAEPTAAR SMSFVGTHEY LAPEIIRGDG HGSSVDWWTF GIFLYELLTG KTPFKGNGNR ETLFNVVGQP
401: LKFPEGSISF AAKDLIRGLL TKDPKKRLGF KKGATEIKQH PFFNNVNWAL IRSTTPPEIP KPIDLSILNE TLKSSVQQQG KHSKQSDSSS GPYLDFEFF

Arabidopsis Description

Protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9LUK3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.