Factsheet for VIT_14s0066g02140.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_13s0074g00100.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G40030.1	VIT_13s0074g00100.t01	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003557	Potato	cytosol, plastid	71.19	73.65
Solyc02g087510.2.1	Tomato	cytosol	70.63	73.08
AT5G40030.1	Thale cress	cytosol, plastid	66.17	71.34
CDX74407	Canola	cytosol, plastid	63.38	71.34
Bra025621.1-P	Field mustard	cytosol, plastid	64.31	70.18
CDY30287	Canola	cytosol, plastid	65.06	69.72
VIT_19s0085g01140.t01	Wine grape	cytosol	51.86	63.27
VIT_13s0074g00730.t01	Wine grape	cytosol	34.2	53.18
VIT_19s0015g00770.t01	Wine grape	extracellular	59.85	52.7
VIT_10s0116g00440.t01	Wine grape	plastid	58.92	51.13
VIT_06s0061g01560.t01	Wine grape	nucleus	39.59	47.33
VIT_14s0066g00460.t01	Wine grape	cytosol, plastid	57.99	46.02
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	40.15	45.96
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	36.43	43.46
VIT_15s0021g01540.t01	Wine grape	cytosol	57.06	43.12
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	35.32	40.08
VIT_08s0007g03600.t01	Wine grape	cytosol	50.93	31.71
VIT_06s0061g01540.t01	Wine grape	cytosol	50.93	31.17

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100264610	wikigene:100264610	MapMan:18.4.6.5	Gene3D:3.30.200.20	ProteinID:CCB58568
ProteinID:CCB58568.1	ncoils:Coil	UniProt:F6HV50	EMBL:FN596252	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100264610	wikigene:LOC100264610	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24351	PANTHER:PTHR24351:SF84	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001984AFF	ArrayExpress:VIT_14s0066g02140	EnsemblPlantsGene:VIT_14s0066g02140	EnsemblPlants:VIT_14s0066g02140.t01	RefSeq:XP_002276011	RefSeq:XP_002276011.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr14:+:28373513..28376059

Molecular Weight (calculated)

59688.4 Da

IEP (calculated)

5.295

GRAVY (calculated)

-0.397

Length

538 amino acids

Sequence
(BLAST)

001: MGNQATGDDD SVSSSTVTNS DNNAISNVVD EATENLESAE INNGADETTK NVEISNAEDE AKKDVETTEI SNGDAAEATE NGESVDCVES EKSSLSSASY
101: SNSSDANETN FRSFCASKPH RGNDIRWDAI QCVKAKDGDM GLCHFRLLKK LGCGDIGSVY LAELRGMSCL FAMKVMDKGM LEERKKLMRA QTEREILGLL
201: DHPFLPTLYS HFETEKFSCL LMEFCSGGDL HTLRQRQPGK HFSEQAARFY ASEVLLALEY LHMLGVVYRD LKPENVLVRE DGHIMLSDFD LSLRCYVSPT
301: LVQTSSDPSF RISSYCIQPS CIDPACKLSV CVEPSCLQPS CFKPRLFKAK SRKPRSERLS LTNLDSLPML IAEPTGARSM SFVGTHEYLA PEIIRGDGHG
401: SAVDWWTFGI FLYELLHGRT PFKGNGNRET LFNVVGQSLK FAEGSSISFA AKDLIRGLLV KDPQKRLGYK RGATEIKQHP FFESVNWALI RSTHPPQIPK
501: PVDLECLNHT SSSSMRLNDK GATDSDRSSG PYLDFEFF

Best Arabidopsis Sequence Match ( AT5G40030.1 )
(BLAST)

001: MSKQTPNLES LQDCSSSNYN NANASPVSGS ASFKTSSNGS EDVRLNNSIS LSFCSSNSVS SEANLEKTQS FDANEANFKR VFAPSKPHKG NDLRWDAIQN
101: VKCSKNEDLG LGHFRLLKKL GCGDIGSVYL AELREMGCFF AMKVMDKGML IGRKKLVRAQ TEREILGLLD HPFLPTLYSH FETEKFSCLL MEFCSGGDLH
201: ILRQKQPGKH FSELAARFYA SEVLLALEYL HMMGVVYRDL KPENVMVRED GHIMLSDFDL SLQSFVSPTL IQSTSQPSCH IASYCIQPPC IDPSCKLPVA
301: CIQPSCFKPR FLNNKPRKAK TEKAGSDSLP MLIAEPTAAR SMSFVGTHEY LAPEIIRGDG HGSSVDWWTF GIFLYELLTG KTPFKGNGNR ETLFNVVGQP
401: LKFPEGSISF AAKDLIRGLL TKDPKKRLGF KKGATEIKQH PFFNNVNWAL IRSTTPPEIP KPIDLSILNE TLKSSVQQQG KHSKQSDSSS GPYLDFEFF

Arabidopsis Description

Protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9LUK3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.