Factsheet for VIT_14s0066g00460.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_13s0074g00100.t01
VIT_17s0000g06020.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G27580.1	VIT_17s0000g06020.t01	AT3G47620.1	21798944
AT3G27580.1	VIT_13s0074g00100.t01	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032816	Potato	cytosol	69.17	74.33
Solyc02g093360.2.1	Tomato	cytosol	68.14	73.92
KRG93211	Soybean	cytosol	66.22	73.37
GSMUA_Achr5P00910_001	Banana	extracellular	29.94	71.73
KRG94078	Soybean	cytosol, plastid	66.22	71.16
KRH07149	Soybean	cytosol	66.08	71.0
Solyc02g067830.2.1	Tomato	cytosol	65.04	70.33
PGSC0003DMT400017808	Potato	cytosol, plastid	67.55	68.77
CDX83710	Canola	cytosol, plastid	54.57	67.4
AT3G27580.1	Thale cress	cytosol, plastid	56.05	65.74
VIT_19s0085g01140.t01	Wine grape	cytosol	41.74	64.17
Bra025288.1-P	Field mustard	cytosol	54.72	63.1
VIT_10s0116g00440.t01	Wine grape	plastid	57.52	62.9
CDY13725	Canola	plastid	53.24	62.67
VIT_19s0015g00770.t01	Wine grape	extracellular	55.9	62.03
VIT_14s0066g02140.t01	Wine grape	cytosol	46.02	57.99
VIT_13s0074g00730.t01	Wine grape	cytosol	27.73	54.34
VIT_06s0061g01560.t01	Wine grape	nucleus	32.74	49.33
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	33.92	48.94
VIT_15s0021g01540.t01	Wine grape	cytosol	51.18	48.74
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	29.65	44.57
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	28.61	40.93
VIT_06s0061g01540.t01	Wine grape	cytosol	45.72	35.27
VIT_08s0007g03600.t01	Wine grape	cytosol	43.66	34.26

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100268156	wikigene:100268156	MapMan:18.4.6.5	Gene3D:3.30.200.20	ProteinID:CCB58465
ProteinID:CCB58465.1	UniProt:F6HUU7	EMBL:FN596252	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100268156	wikigene:LOC100268156	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351
PANTHER:PTHR24351:SF86	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001984B71
ArrayExpress:VIT_14s0066g00460	EnsemblPlantsGene:VIT_14s0066g00460	EnsemblPlants:VIT_14s0066g00460.t01	unigene:Vvi.15692	RefSeq:XP_002272711	RefSeq:XP_002272711.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr14:-:26961678..26966513

Molecular Weight (calculated)

74731.7 Da

IEP (calculated)

8.090

GRAVY (calculated)

-0.363

Length

678 amino acids

Sequence
(BLAST)

001: MESVGDGVSS FPKTHNSASV MGYNLSSISG TSRPTRLPPP KQSRNDGASS ASYATVPDHG MKTVLHAVDS VINEKHSHKT AQDHMHLEEL HTSSKQLYKS
101: NKDQLVVGPN DVLDKMVKNS SQKQVSAVET KSCIKHPVDV SENCNSSGLI GPENFVPGPC KGGVVEPNSQ LTAQSAISFC ASPQNSLYSA TQYTEAKQSF
201: TNTEVSECAS SVEKSGESAE ISNSCDFAES RKTSIYRGST GSDVSDESSS SSFSSTLYKP HKANDTRWEA IQAVRSRDGV LGLNHFRLLK KLGCGDIGTV
301: YLSELSCTRS YFAMKVMDKG ALASRKKLLR AQTEREILQS LDHPFLPTLY THFETEKFSC LVMEFCPGGD LHALRQRQPG KYFSEHAARF YVAEVLLALE
401: YLHMLGIIYR DLKPENVLVR EDGHIMLSDF DLSLRCAVCP TLVKFSNSSL ESKNSGYCVQ PACIEPTCVI QPSCIQPTCF APRFLTRAKK EKKAKPKNDI
501: YHQVSPLPEL IAEPTTARSM SFVGTHEYLA PEIIKGEGHG SAVDWWTFGI FLYELLFGKT PFKGAGNRAT LFNVVGQPLR FPESPAVSFA ARDLIRGLLV
601: KEPQHRLAYR RGATEVKQHP FFQSVNWALI RCTNPPDMPK PFMIDFSARS DTTKAPTAGK VPGVDVKPSG NYLEIDFF

Best Arabidopsis Sequence Match ( AT5G47750.1 )
(BLAST)

001: MASTRKPSGH GAEVEAQKRS SSNSSTKSAK AETFEPMQLQ RSVTNPRAVG IPESKRLPES FRKRSSDPAV CKPDFSSLST VLEHVDSLTI DEKKTSGFGS
101: VKTSSASAKL SDGTSSLGKT SGSAKLSGRL DFMESGKSSI CRGSTSSDVS DESSCSSFSS TVNKPHKAND LRWEAIQAVR VRDGLLGLSH FRLLKRLGCG
201: DIGSVYLSEL SGTKCYFAMK VMDKTSLASR KKLLRAQTER EILQSLDHPF LPTLYTHFET EKFSCLVMEF CPGGDLHTLR QRQPGKHFSE QAVKFYIAES
301: LLALEYLHML GIVYRDLKPE NVLVREDGHI MLSDFDLSLR CLVSPTLVKS AAIESDPLRK NVYCVQPACI EPSCIQPSCT VPTTCFSPRL FSSKSKKDRK
401: PKNDTANQVR PLPELVAEPT DARSMSFVGT HEYLAPEIIK GEGHGSAVDW WTFGIFLYEL LFGRTPFKGS GNRQTLFNVV GQPLRFPETP VVSFAARDLI
501: RGLLMKEPQQ RLGFKRGATE VKQHPFFEGV NWALIRCATP PEIPKPVELE KGAVSVAEAP SSQKTAAGLV LNAQKGSDNY LEFDFF

Arabidopsis Description

D6PKL2Serine/threonine-protein kinase D6PKL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39183]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.