CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70218
CDY24170
CDY36943
CDY44862

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G27580.1	CDY24170	AT3G47620.1	21798944
AT3G27580.1	CDY36943	AT3G47620.1	21798944
AT3G27580.1	CDX70218	AT5G04510.1	16973627
AT3G27580.1	CDY44862	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025288.1-P	Field mustard	cytosol	97.57	95.58
CDX83710	Canola	cytosol, plastid	90.62	95.08
AT3G27580.1	Thale cress	cytosol, plastid	78.12	77.85
GSMUA_Achr5P00910_001	Banana	extracellular	34.03	69.26
CDY20744	Canola	cytosol, plastid	52.26	62.45
CDY06552	Canola	cytosol, plastid	52.43	62.4
CDY36769	Canola	cytosol, plastid	52.08	60.98
CDY11972	Canola	cytosol, plastid	52.08	60.98
CDY28629	Canola	cytosol, plastid	52.78	60.8
CDY17366	Canola	cytosol, plastid	52.6	60.6
CDX94306	Canola	cytosol	52.6	59.06
CDX89320	Canola	cytosol	52.26	58.67
Solyc02g093360.2.1	Tomato	cytosol	62.85	57.92
PGSC0003DMT400032816	Potato	cytosol	63.19	57.69
KRG93211	Soybean	cytosol	59.72	56.21
CDY17708	Canola	cytosol	52.95	55.05
Solyc02g067830.2.1	Tomato	cytosol	59.38	54.55
KRG94078	Soybean	cytosol, plastid	59.55	54.36
KRH07149	Soybean	cytosol	59.03	53.88
CDX77795	Canola	cytosol	53.12	53.59
VIT_14s0066g00460.t01	Wine grape	cytosol, plastid	62.67	53.24
CDX74407	Canola	cytosol, plastid	43.75	52.72
PGSC0003DMT400017808	Potato	cytosol, plastid	60.59	52.4
CDY33329	Canola	cytosol	43.58	51.54
CDY30287	Canola	cytosol, plastid	44.62	51.2
CDY35093	Canola	cytosol	43.23	48.82
CDX74691	Canola	cytosol	46.18	47.76
CDY56474	Canola	cytosol	46.18	46.5
CDY08710	Canola	cytosol, plastid	34.9	45.58
CDY08414	Canola	cytosol, plastid	43.92	44.31
CDY42166	Canola	cytosol, plastid	43.75	44.29
CDY43662	Canola	cytosol	33.51	43.96
CDX84294	Canola	cytosol, plastid	33.51	43.96
CDY50542	Canola	cytosol	43.23	43.53
CDY17273	Canola	cytosol	33.16	43.51
CDY30488	Canola	cytosol	46.18	43.04
CDY23458	Canola	cytosol	46.7	41.64
CDY48186	Canola	cytosol	33.16	39.14
CDX98447	Canola	nucleus	31.08	37.76
CDX97569	Canola	nucleus	31.08	37.37
CDY30659	Canola	nucleus	30.56	35.85
CDY67737	Canola	nucleus	30.56	35.77
CDY13336	Canola	cytosol, plastid	42.53	35.2
CDX75049	Canola	cytosol	39.93	31.81
CDX67542	Canola	cytosol	42.71	30.64
CDX84133	Canola	cytosol	40.1	30.04
CDX70297	Canola	cytosol	42.88	28.16
CDX76251	Canola	cytosol	40.1	28.07
CDY10368	Canola	cytosol	42.71	27.21
CDY33330	Canola	cytosol, mitochondrion, nucleus	7.12	25.15
CDX73596	Canola	cytosol	42.88	24.58
CDX78131	Canola	cytosol	43.06	24.55
CDX77055	Canola	cytosol	33.16	22.24

Protein Annotations

MapMan:18.4.6.5	GO:A0A078FH23	UniProt:A0A078FH23	EnsemblPlants:CDY13725	ProteinID:CDY13725	ProteinID:CDY13725.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00078151001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF86	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF3498	SEG:seg	:	:

Description

BnaA06g31980DBnaA06g31980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH23]

Coordinates

chrLK032037:-:776967..784197

Molecular Weight (calculated)

64154.6 Da

IEP (calculated)

9.016

GRAVY (calculated)

-0.408

Length

576 amino acids

Sequence
(BLAST)

001: MLPFTGKCED FFLCFGSATP PKLLHRTPSM DPSIDHASSS SKPRITQAKS KASITSRSID SRATKKQEPP LTATETSPEV YQQHSVSSHV TQKTKHKNKK
101: KKQPEPRFYP SPTNTFYTAP LYTEAKQSFS DCASTLNVGG IDLEKMGVLT YRGSTGSDES SSSGLSNSAG YKPHRANNDK RWVAIQEVRS RVGSSLEAKD
201: FKLVKRLGGG DIGTVYLAEL IGTGETFAVK VMEKAAIAAR KKLVRAQTER EILQSLDHPF LPTLYSHFET ENHSCLVMEF CPGGDLHSLR QKQPGKYFPE
301: HAARFYVAEV LLAMEYLHML GIIYRDLKPE NVLVREDGHI MLSDFDLSLR CSVSPTLVRF AATTTLESKP SSYCIQPSCI VQPDCIQPKL NESARQVRPL
401: PELMAEPTSA RSMSFVGTHE YLAPEIIKGE GHGSAVDWWT FGIFLYELLF GKTPFRGDVN RATLFNVVGQ PLRFPEHPSV SFAARDLIRG LLVKEPQHRL
501: AYRRGATEIK QHPFFQSINW ALIRCTNPPQ VPQPVKIMDN AQSQGHGCSR SQGDGKPPTV VVDVKPSANY LEIDFF

Best Arabidopsis Sequence Match ( AT3G27580.1 )
(BLAST)

001: MDSSSSVVYV GSSSKSRNFQ SKSKGSITSF SIDSRGTKKS MKTLLIPEPE PTSPEVIESS VSSVSAESET PISIIRKKKQ SEPRFYSSPT NTFYTEAKQS
101: FTNTEFSECA SISTIGIGGI DLEKNGVMIY RGSIGSDVSD ESSSSGLSNA AYKPHRDNND KRWVAIQEVR SRVGSSLEAK DFKLIKKLGG GDIGNVYLAE
201: LIGTGVSFAV KVMEKAAIAA RKKLVRAQTE KEILQSLDHP FLPTLYSHFE TEMNSCLVME FCPGGDLHSL RQKQRGKYFP EQAARFYVAE VLLAMEYLHM
301: LGIIYRDLKP ENVLVREDGH IMLSDFDLSL RCAVSPTLVR FAAITLESKS SSYCIQPTCV DQSSCIVQPD CIQPVCFTPR FLSKGKHRKK SNDMSRQIRP
401: LPELIAEPTS ARSMSFVGTH EYLAPEIIKG EGHGSAVDWW TFGIFLYELL FGITPFRGGD NRATLFNVVG QPLRFPEHPN VSFAARDLIR GLLVKEPQHR
501: LAYRRGATEI KQHPFFQSVN WALIRCTSPP QIPQPVKPMD QAHSVRHGFS QGHGHVGYDK PPTVDVKPSG NYLEIDFF

Arabidopsis Description

D6PKL3Serine/threonine-protein kinase D6PKL3 [Source:UniProtKB/Swiss-Prot;Acc:Q05999]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.