CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36769	Canola	cytosol, plastid	99.39	99.39
Bra028955.1-P	Field mustard	cytosol, plastid	98.98	98.98
CDY06552	Canola	cytosol, plastid	92.89	94.42
CDY20744	Canola	cytosol, plastid	92.48	94.4
CDY17366	Canola	cytosol, plastid	95.33	93.8
CDY28629	Canola	cytosol, plastid	94.72	93.2
AT5G55910.2	Thale cress	cytosol, plastid	94.11	92.97
CDX94306	Canola	cytosol	84.96	81.48
CDX89320	Canola	cytosol	84.96	81.48
CDY17708	Canola	cytosol	71.34	63.36
CDX77795	Canola	cytosol	70.94	61.12
PGSC0003DMT400050818	Potato	cytosol	74.8	60.63
Solyc04g015130.2.1	Tomato	cytosol, plastid	74.39	60.3
CDX74407	Canola	cytosol, plastid	55.08	56.69
CDX83710	Canola	cytosol, plastid	62.8	56.28
CDY30287	Canola	cytosol, plastid	55.89	54.78
CDY33329	Canola	cytosol	52.85	53.39
CDX74691	Canola	cytosol	59.35	52.42
CDY13725	Canola	plastid	60.98	52.08
CDY56474	Canola	cytosol	59.35	51.05
CDY35093	Canola	cytosol	52.85	50.98
CDY08710	Canola	cytosol, plastid	42.68	47.62
CDY42166	Canola	cytosol, plastid	54.88	47.45
CDY08414	Canola	cytosol, plastid	54.88	47.29
CDX84294	Canola	cytosol, plastid	41.87	46.92
CDY50542	Canola	cytosol	54.06	46.5
CDY17273	Canola	cytosol	41.46	46.47
CDY43662	Canola	cytosol	40.45	45.33
CDY30488	Canola	cytosol	56.71	45.15
CDY48186	Canola	cytosol	43.09	43.44
CDY23458	Canola	cytosol	56.5	43.03
CDX98447	Canola	nucleus	36.59	37.97
CDY13336	Canola	cytosol, plastid	53.46	37.79
CDX97569	Canola	nucleus	36.38	37.37
CDY30659	Canola	nucleus	36.18	36.25
CDY67737	Canola	nucleus	36.18	36.18
CDX75049	Canola	cytosol	49.8	33.89
CDX67542	Canola	cytosol	53.05	32.5
CDX84133	Canola	cytosol	50.0	31.99
CDX70297	Canola	cytosol	53.46	29.99
CDX76251	Canola	cytosol	48.78	29.16
CDY10368	Canola	cytosol	53.46	29.09
CDX73596	Canola	cytosol	52.85	25.87
CDX78131	Canola	cytosol	52.64	25.64
CDX77055	Canola	cytosol	43.09	24.68
CDY33330	Canola	cytosol, mitochondrion, nucleus	7.52	22.7

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:A0A078FG53	UniProt:A0A078FG53	EnsemblPlants:CDY11972
ProteinID:CDY11972	ProteinID:CDY11972.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00060821001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF112
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE71DE	SEG:seg

Description

BnaC03g13980DBnaC03g13980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FG53]

Coordinates

chrLK032015:+:668353..671234

Molecular Weight (calculated)

54197.6 Da

IEP (calculated)

8.325

GRAVY (calculated)

-0.299

Length

492 amino acids

Sequence
(BLAST)

001: MASKTPEGSL TSSSNTISVN TLADQVSSTL SLADPTNKKT SEQGESGKSS TCRPSTSSDI SDESTCSSFS SSVNKPHKAN DVRWEAIQAV RTKHGGLGLN
101: HFRLLKRLGC GDIGTVHLAE LNGTRCYFAM KVMDKTALAS RKKLLRAQTE REILQCLDHP FLPTLYSHFE TEKFSCLVME FCPGGDLHTL RQRQPGKRFT
201: EQAAKFYVAE VLLAMEYLHM LGIIYRDLKP ENVLVRDDGH VMLSDFDLSL RCTVSLSIVR SSTNLGSEGL SKSSVSCSQQ PACIQQPSCI SMAPTSCFGP
301: RFFSKSKKDK KPKTDNGNHQ VTPLPELVAE PTSARSMSFV GTHEYLAPEI IKGEGHGSAV DWWTFGIFLY ELLFGKTPFK GSGNRATLFN VVGQPLRFPD
401: SPVVSFAARD LIRSLLVKEP QHRLAYKRGA TEIKQHPFFE GVNWALVRCA SPPEIPKPVE IEPVNCTPPA VPAAASTSVR SDQSNYLEFD FF

Best Arabidopsis Sequence Match ( AT5G55910.2 )
(BLAST)

001: MMASKTPEGS LTNSSQSMSI NTLADQVSSS LSFADPSSDG KTGNSKINEQ GESGKSSTCR PSTSSDISDE STCSSFSSSI NKPHKANDVR WEAIQAVRTK
101: HGGLGLNHFR LLKRLGCGDI GTVHLAELNG TRCYFAMKVM DKTALASRKK LLRAQTEREI LQCLDHPFLP TLYSHFETEK FSCLVMEFCP GGDLHTLRQR
201: QPGKRFTEQA AKFYVAEVLL AMEYLHMLGI IYRDLKPENV LVRDDGHVML SDFDLSLRCT VSLSIVRSAN VGSEGLSKNS VSCSQQPACI QQPSCISMAP
301: TSCFGPRFFS SKSKKDKKPK TENGNHQVTP LPELVAEPTG ARSMSFVGTH EYLAPEIIKG EGHGSAVDWW TFGIFLYELL FGKTPFKGSG NRATLFNVVG
401: QPLRFPESPV VSFAARDLIR SLLVKEPQHR LAYKRGATEI KQHPFFEGVN WALVRCASPP EIPKPVDLEA LNPTPTVPAA ASSSVRSDQS NYLEFDFF

Arabidopsis Description

D6PKSerine/threonine-protein kinase D6PK [Source:UniProtKB/Swiss-Prot;Acc:Q9FG74]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.