Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70218
CDY44862

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G14370.1 CDX70218 AT5G04510.1 16973627
AT3G14370.1 CDY44862 AT5G04510.1 16973627
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027344.1-P Field mustard nucleus 99.79 99.79
CDX98447 Canola nucleus 97.49 98.52
AT3G14370.1 Thale cress nucleus 93.95 93.75
CDY67737 Canola nucleus 76.2 74.19
CDY30659 Canola nucleus 75.78 73.93
KRH43840 Soybean cytosol 62.63 64.94
VIT_19s0027g00020.t01 Wine grape nucleus, plastid 63.67 64.35
KRH13630 Soybean nucleus 63.26 63.39
PGSC0003DMT400079838 Potato nucleus 62.21 61.95
Solyc07g056400.1.1 Tomato nucleus 62.42 61.9
GSMUA_Achr4P21830_001 Banana cytosol 42.8 46.17
GSMUA_Achr4P18040_001 Banana cytosol 43.42 46.12
Os03t0253200-01 Rice nucleus 41.75 39.37
TraesCS4D01G222200.1 Wheat nucleus 42.17 39.0
CDY43662 Canola cytosol 35.7 38.95
TraesCS4B01G221800.1 Wheat nucleus 41.96 38.88
CDY08710 Canola cytosol, plastid 35.7 38.78
CDY17273 Canola cytosol 35.49 38.72
CDX84294 Canola cytosol, plastid 35.49 38.72
TraesCS4A01G082200.1 Wheat nucleus 41.54 38.34
HORVU4Hr1G062610.1 Barley nucleus, vacuole 41.13 37.52
EER95166 Sorghum nucleus 40.92 37.33
CDX74407 Canola cytosol, plastid 36.74 36.82
CDY20744 Canola cytosol, plastid 36.95 36.72
CDY48186 Canola cytosol 37.37 36.68
Zm00001d028447_P001 Maize nucleus 40.5 36.67
CDY06552 Canola cytosol, plastid 36.95 36.57
CDY11972 Canola cytosol, plastid 37.37 36.38
CDY36769 Canola cytosol, plastid 37.16 36.18
CDY30287 Canola cytosol, plastid 37.37 35.66
CDY28629 Canola cytosol, plastid 36.74 35.2
CDY17366 Canola cytosol, plastid 36.74 35.2
CDX89320 Canola cytosol 37.37 34.89
CDX94306 Canola cytosol 37.37 34.89
CDY33329 Canola cytosol 35.07 34.5
CDY17708 Canola cytosol 39.25 33.94
CDY35093 Canola cytosol 35.28 33.14
CDX83710 Canola cytosol, plastid 37.79 32.97
CDX77795 Canola cytosol 39.25 32.92
CDX74691 Canola cytosol 38.2 32.85
CDY56474 Canola cytosol 38.62 32.34
CDY13725 Canola plastid 37.37 31.08
CDY42166 Canola cytosol, plastid 36.33 30.58
CDY08414 Canola cytosol, plastid 36.33 30.47
CDY30488 Canola cytosol 39.04 30.26
CDY50542 Canola cytosol 35.91 30.07
CDY23458 Canola cytosol 39.04 28.95
CDY13336 Canola cytosol, plastid 36.33 25.0
CDX75049 Canola cytosol 34.03 22.55
CDX67542 Canola cytosol 37.37 22.29
CDX84133 Canola cytosol 33.82 21.07
CDX77055 Canola cytosol 37.16 20.72
CDX76251 Canola cytosol 35.28 20.53
CDX70297 Canola cytosol 36.53 19.95
CDY10368 Canola cytosol 36.95 19.58
CDX78131 Canola cytosol 38.0 18.02
CDX73596 Canola cytosol 37.79 18.01
CDY33330 Canola cytosol, mitochondrion, nucleus 6.05 17.79
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.6.5Gene3D:3.30.200.20GO:A0A078EA23EnsemblPlants:CDX97569ProteinID:CDX97569
ProteinID:CDX97569.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00104784001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24351PANTHER:PTHR24351:SF82InterPro:Prot_kinase_dom
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EDFECCSEG:seg:
Description
BnaA05g25100D
Coordinates
chrLK031900:-:350862..352301
Molecular Weight (calculated)
54234.5 Da
IEP (calculated)
9.945
GRAVY (calculated)
-0.454
Length
479 amino acids
Sequence
(BLAST)
001: MEEEIYFPDT DLDLSFTSTV TDRTFASSSG RSSLTLSFND RLSTSSAVTT SSTSSSTINH RRQDPHWSAI KSAKLLSSDG NIHLRHLKLI RHLGTGNLGR
101: VFLCNLRDSS ARFALKVIDR NNLTTAKKLS QVETEAEILS LLDHPFLPTL HARIDESHYT CLLIDYAPNG DLHSLLRKQP GNRLPLQPVR FFAAEVLVAL
201: EYLHAMGIVY RDLKPENVLL REDGHVMLSD FDLCFKSDVV PTFKSRRYRR TSSSPSLRRR RSGCFSTPAE EKYEMEEIVS EFTAEPVTAF SRSCVGTHEY
301: LAPELVSGNG HGSGVDWWAF GIFLYELLYG TTPFKGDSKE QTLRNIVSTT KTVKFHVDSD MDEARDLIEK LLVKDPKKRL GCARGAQDIK RHPFFDGIKW
401: PLIRHYKPPE EVRGLVIKKS TRAHAGHVTA VTPRRRKSFL WRALSYLLRG KSSSGGSKNQ SNSNYYHYVG KSYASRKRV
Best Arabidopsis Sequence Match ( AT3G14370.1 )
(BLAST)
001: MEQEDFYFPD TDLDLSFTST TTDRTFASSS ARTSLTLSFN DRLSTSSAVT TSSTSSSSVN HRRHDPHWSA IKSAKLLSSD GNIHLRHLKL IRHLGTGNLG
101: RVFLCNLRDS SARFALKVID RNCLTTEKKL SQVETEAEIL SLLDHPFLPT LYARIDESHY TCLLIDYAPN GDLHSLLRKQ PGNRLPIQPV RFFAAEVLVA
201: LEYLHAMGIV YRDLKPENVL LREDGHVMLS DFDLCFKSDV VPTFKSRRYR RSSSSPSLRR RRSGCFSVAA EKKYEREEIV SEFAAEPVTA FSRSCVGTHE
301: YLAPELVSGN GHGSGVDWWA FGIFLYELLY GTTPFKGESK EQTLRNIVST TKTASFHMDG DLDEARDLIE KLLVKDPRKR LGCARGAQDI KRHPFFDGIK
401: WPLIRHYKPP EEVRGLVIKK STRPHASHVI AVSPRRRKSF LWRALSYLLR GKSSSGGSKN QSNSNYYHYV GKSYASRKRV
Arabidopsis Description
WAG2WAG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VAK4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.