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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX74407
CDX75049
CDX77055
CDX77795
CDX83710
CDX84133
CDX84294
CDX89320
CDX94306
CDX97569
CDX98447
CDY13725
CDY17273
CDY17708
CDY30287
CDY30659
CDY33329
CDY35093
CDY43662
CDY48186
CDY67737

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G04510.1 CDY33329 AT1G16440.1 16973627
AT5G04510.1 CDY35093 AT1G16440.1 16973627
AT5G04510.1 CDY30659 AT1G53700.1 16973627
AT5G04510.1 CDY67737 AT1G53700.1 16973627
AT5G04510.1 CDX77055 AT2G26700.1 16973627
AT5G04510.1 CDY48186 AT2G26700.1 16973627
AT5G04510.1 CDX84294 AT2G34650.1 16601102
AT5G04510.1 CDY17273 AT2G34650.1 16601102
AT5G04510.1 CDY43662 AT2G34650.1 16601102
AT5G04510.1 CDX75049 AT2G36350.1 16973627
AT5G04510.1 CDX84133 AT2G36350.1 16973627
AT5G04510.1 CDX97569 AT3G14370.1 16973627
AT5G04510.1 CDX98447 AT3G14370.1 16973627
AT5G04510.1 CDX83710 AT3G27580.1 16973627
AT5G04510.1 CDY13725 AT3G27580.1 16973627
AT5G04510.1 CDX89320 AT4G26610.1 16973627
AT5G04510.1 CDX94306 AT4G26610.1 16973627
AT5G04510.1 CDX74407 AT5G40030.1 16973627
AT5G04510.1 CDY30287 AT5G40030.1 16973627
AT5G04510.1 CDX77795 AT5G47750.1 16973627
AT5G04510.1 CDY17708 AT5G47750.1 16973627
AT5G04510.1 CDX77795 AT5G47750.1 21798944
AT5G04510.1 CDY17708 AT5G47750.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX70218 Canola cytosol 99.18 98.98
Bra009447.1-P Field mustard cytosol 98.98 98.78
AT5G04510.1 Thale cress cytosol 92.43 92.06
CDY41359 Canola cytosol 90.59 90.97
CDY68313 Canola cytosol 85.28 90.26
CDY08594 Canola cytosol 86.91 88.36
CDY00952 Canola cytosol 86.5 87.58
KRG92082 Soybean cytosol 82.0 81.67
PGSC0003DMT400043552 Potato cytosol 79.96 81.63
Solyc03g071750.2.1 Tomato cytosol 80.37 81.37
PGSC0003DMT400070360 Potato cytosol 80.37 81.2
KRH34704 Soybean cytosol 81.39 81.06
VIT_13s0074g00100.t01 Wine grape cytosol 82.82 80.04
Solyc11g007760.1.1 Tomato cytosol 80.37 79.55
GSMUA_Achr10P... Banana cytosol 70.96 69.4
GSMUA_Achr5P26030_001 Banana cytosol 70.76 68.92
Zm00001d042676_P001 Maize cytosol 50.1 67.49
Os01t0872800-01 Rice cytosol 68.71 67.47
EES03961 Sorghum cytosol 67.69 65.67
TraesCS3D01G376500.1 Wheat cytosol 67.48 65.09
TraesCS3A01G383400.1 Wheat cytosol, plastid 67.08 64.82
TraesCS3B01G415800.1 Wheat cytosol 66.67 64.81
HORVU3Hr1G082260.4 Barley cytosol 67.69 62.1
CDY58648 Canola cytosol 22.29 25.71
CDY67156 Canola cytosol 24.54 25.26
CDY22166 Canola cytosol 22.49 24.83
CDY36000 Canola cytosol 22.9 24.78
CDY58649 Canola cytosol 23.11 24.67
CDY69024 Canola cytosol 24.13 24.63
CDY36001 Canola cytosol, mitochondrion 23.11 24.46
CDY27983 Canola cytosol 22.7 24.4
CDY27982 Canola cytosol, mitochondrion 22.9 24.35
CDY46196 Canola cytosol 25.77 24.18
CDY03775 Canola cytosol 25.77 24.18
CDY22167 Canola cytosol 22.7 24.13
CDX68937 Canola cytosol 25.56 24.08
CDY56408 Canola cytosol 25.77 23.82
CDY65082 Canola cytosol 23.31 23.7
CDX75322 Canola endoplasmic reticulum 25.15 23.7
CDY67274 Canola cytosol 24.95 23.15
CDY49415 Canola cytosol 25.97 23.05
CDY12763 Canola cytosol 25.97 23.05
CDX85087 Canola cytosol 25.56 22.69
CDX77529 Canola cytosol 25.56 22.69
CDY02314 Canola cytosol 25.97 22.6
CDY09553 Canola cytosol, plastid 25.97 22.6
CDY31963 Canola cytosol 26.18 22.22
CDY67568 Canola cytosol 23.31 22.09
CDY65084 Canola cytosol 24.74 21.92
CDY30714 Canola cytosol 22.7 21.76
CDY70020 Canola cytosol 9.2 20.36
CDX90255 Canola cytosol 25.77 19.97
CDX89854 Canola cytosol 13.7 19.76
CDY09005 Canola cytosol 17.79 18.55
CDY12061 Canola cytosol 23.11 17.74
CDY41826 Canola cytosol 24.13 15.25
CDX93672 Canola cytosol, mitochondrion 23.31 12.26
CDY49673 Canola cytosol 22.9 11.37
CDY17064 Canola cytosol 23.93 11.07
CDY43221 Canola cytosol 23.93 11.06
CDY05763 Canola cytosol 25.97 10.97
CDY00276 Canola cytosol 24.95 10.9
CDX86906 Canola cytosol 24.95 10.9
CDX77308 Canola cytosol, plastid 24.54 9.9
CDY61286 Canola cytosol, plastid 24.34 9.69
CDX95815 Canola plastid 24.13 9.25
CDX92168 Canola plastid 23.93 9.12
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.6.2Gene3D:2.30.29.30Gene3D:3.30.200.20GO:A0A078I476UniProt:A0A078I476EnsemblPlants:CDY44862
ProteinID:CDY44862ProteinID:CDY44862.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00080918001
InterPro:IPR000719InterPro:IPR011993InterPro:Kinase-like_dom_sfInterPro:PDK1-typ_PHPFAM:PF00069PFAM:PF14593
InterPro:PH-like_dom_sfPIRSF:PIRSF000654ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24356PANTHER:PTHR24356:SF163
InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF50729SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EB094B
SEG:seg:::::
Description
BnaC09g50620DBnaC09g50620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I476]
Coordinates
chrLK032604:+:121747..124742
Molecular Weight (calculated)
54293.6 Da
IEP (calculated)
8.967
GRAVY (calculated)
-0.365
Length
489 amino acids
Sequence
(BLAST)
001: MEKEFDSKLV LQGNGNGGSV SRSKSFSFKA PQESFTIQDF QLGKIYGVGS YSKVVRAKKK ESGTVYALKI MDKKFITKEN KTAYVKLERI VLDQLDHPGI
101: IKLFFTFQDS FSLYMALESC EGGELFDQIT RKGRLSEEEA RFYSAQVVDA LEYIHSMGLI HRDIKPENLL LTSDGHIKIA DFGSVKPMQD SRITVLPNAA
201: SDDKACTFVG TAAYVPPEVL NSSPATFGND LWALGCTIYQ MLSGTSPFKD ASEWLIFQRI IARDIKFPSH FSDAARDLID RLLDTDPSRR PGAGSEGYAA
301: LKRHPFFMGV DWKNLRSQTP PKLAPDPASQ TASPEREDAH GSSPWNPTHI GDSSAAHNDG HSAPSTPSES SSGSITRLAS IDSFDSRWQQ FLEPGESVLM
401: ISAVKKLQKI TSKKVQLILT NKPKLIYVDP SKLVVKGNII WSDNSNDLNV VVTSPSHFKI CTPKKVLSFE DVKQRALVWK KAIETLQNR
Best Arabidopsis Sequence Match ( AT5G04510.1 )
(BLAST)
001: MLAMEKEFDS KLVLQGNSSN GANVSRSKSF SFKAPQENFT SHDFEFGKIY GVGSYSKVVR AKKKETGTVY ALKIMDKKFI TKENKTAYVK LERIVLDQLE
101: HPGIIKLYFT FQDTSSLYMA LESCEGGELF DQITRKGRLS EDEARFYTAE VVDALEYIHS MGLIHRDIKP ENLLLTSDGH IKIADFGSVK PMQDSQITVL
201: PNAASDDKAC TFVGTAAYVP PEVLNSSPAT FGNDLWALGC TLYQMLSGTS PFKDASEWLI FQRIIARDIK FPNHFSEAAR DLIDRLLDTE PSRRPGAGSE
301: GYVALKRHPF FNGVDWKNLR SQTPPKLAPD PASQTASPER DDTHGSPWNL THIGDSLATQ NEGHSAPPTS SESSGSITRL ASIDSFDSRW QQFLEPGESV
401: LMISAVKKLQ KITSKKVQLI LTNKPKLIYV DPSKLVVKGN IIWSDNSNDL NVVVTSPSHF KICTPKKVLS FEDAKQRASV WKKAIETLQN R
Arabidopsis Description
PDPK13-phosphoinositide-dependent protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XF67]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.