Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G383400.1 | Wheat | cytosol, plastid | 97.83 | 98.02 |
| TraesCS3B01G415800.1 | Wheat | cytosol | 96.65 | 97.42 |
| Os01t0872800-01 | Rice | cytosol | 89.55 | 91.16 |
| HORVU3Hr1G082260.4 | Barley | cytosol | 94.67 | 90.06 |
| EES03961 | Sorghum | cytosol | 86.39 | 86.9 |
| Zm00001d042676_P001 | Maize | cytosol | 61.93 | 86.5 |
| GSMUA_Achr10P... | Banana | cytosol | 73.96 | 75.0 |
| GSMUA_Achr5P26030_001 | Banana | cytosol | 73.18 | 73.9 |
| PGSC0003DMT400070360 | Potato | cytosol | 68.44 | 71.69 |
| PGSC0003DMT400043552 | Potato | cytosol | 67.65 | 71.61 |
| Solyc03g071750.2.1 | Tomato | cytosol | 67.65 | 71.01 |
| Solyc11g007760.1.1 | Tomato | cytosol | 69.03 | 70.85 |
| VIT_13s0074g00100.t01 | Wine grape | cytosol | 70.61 | 70.75 |
| KRG92082 | Soybean | cytosol | 67.46 | 69.65 |
| KRH34704 | Soybean | cytosol | 67.46 | 69.65 |
| AT3G10540.1 | Thale cress | cytosol | 66.08 | 68.93 |
| CDY41359 | Canola | cytosol | 65.88 | 68.58 |
| CDY00952 | Canola | cytosol | 65.29 | 68.53 |
| CDY08594 | Canola | cytosol | 64.89 | 68.4 |
| Bra029850.1-P | Field mustard | cytosol | 64.89 | 68.4 |
| AT5G04510.1 | Thale cress | cytosol | 66.08 | 68.23 |
| CDY68313 | Canola | cytosol | 62.13 | 68.18 |
| Bra034125.1-P | Field mustard | cytosol | 65.68 | 68.1 |
| Bra009447.1-P | Field mustard | cytosol | 65.48 | 67.76 |
| CDY44862 | Canola | cytosol | 65.09 | 67.48 |
| CDX70218 | Canola | cytosol | 65.09 | 67.35 |
| TraesCS2D01G104200.1 | Wheat | cytosol | 22.68 | 23.66 |
| TraesCS4D01G172700.1 | Wheat | plastid | 22.09 | 23.28 |
| TraesCS1D01G122500.4 | Wheat | cytosol | 24.26 | 22.82 |
| TraesCS5D01G060900.1 | Wheat | cytosol | 24.65 | 22.4 |
| TraesCS3D01G112400.1 | Wheat | cytosol | 23.67 | 22.26 |
| TraesCS1D01G151900.1 | Wheat | cytosol | 24.26 | 21.81 |
| TraesCS1D01G332900.4 | Wheat | cytosol | 23.47 | 21.36 |
| TraesCS5D01G033500.1 | Wheat | cytosol | 27.02 | 13.34 |
| TraesCS4D01G045500.2 | Wheat | plastid | 26.43 | 10.69 |
| TraesCS5D01G061000.1 | Wheat | mitochondrion | 0.2 | 0.71 |
Protein Annotations
| KEGG:04150+2.7.11.1 | KEGG:04151+2.7.11.1 | KEGG:04714+2.7.11.1 | KEGG:04926+2.7.11.1 | KEGG:05165+2.7.11.1 | Gene3D:1.10.510.10 |
| MapMan:18.4.6.2 | Gene3D:2.30.29.30 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:IPR011993 | InterPro:Kinase-like_dom_sf | InterPro:PDK1-typ_PH | PFAM:PF00069 | PFAM:PF14593 | InterPro:PH-like_dom_sf |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24356 | PANTHER:PTHR24356:SF163 | InterPro:Prot_kinase_dom | SMART:SM00220 |
| SUPFAM:SSF50729 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS3D01G376500 | EnsemblPlants:TraesCS3D01G376500.1 | TIGR:cd05581 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:490240004..490243762
Molecular Weight (calculated)
56128.6 Da
IEP (calculated)
7.556
GRAVY (calculated)
-0.350
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVGGDDDME RDFAARLRLA PSNPSSASAS ASASPTAASP TAGGGGIAFR APQEQFTAGD FELGKIYGVG SYSKVVRARK KDTGNVYALK IMDKKFITKE
101: NKISYVKMER IVLDQLDHPG VIRLFFTFQD TYSLYMALES CEGGELFDQI VRKGRLSEDE ARFYAAEIVD ILEYLHSVGL IHRDVKPENL LLTSDGHIKI
201: ADFGSVKPTV DTPIKVLPNS TNERACTFVG TAAYVPPEVL NSAPATFGND LWALGCTLFQ MLSGSSPFKD ASEWLIFQRI IARDLRFPEF FSDEARDLID
301: KLLDVDPTKR PGAGPDGYAS LKKHPFFRGI DWKNIRKTRA PKPAVEANAN EDEDNQDSDW LSHMGSAHVN RNVPVGNNGA ASSSEVRSHV SKLASIDSFD
401: SRWQDFLEPG ESVVLISKLK KINKLSNKKV QLILTNKPQL ICVDPAKMVT KGNISWSANP SELNVQVGNS SHFRICTPKK VFVFEDAKQR AWQWKNAIED
501: LQNCQKI
101: NKISYVKMER IVLDQLDHPG VIRLFFTFQD TYSLYMALES CEGGELFDQI VRKGRLSEDE ARFYAAEIVD ILEYLHSVGL IHRDVKPENL LLTSDGHIKI
201: ADFGSVKPTV DTPIKVLPNS TNERACTFVG TAAYVPPEVL NSAPATFGND LWALGCTLFQ MLSGSSPFKD ASEWLIFQRI IARDLRFPEF FSDEARDLID
301: KLLDVDPTKR PGAGPDGYAS LKKHPFFRGI DWKNIRKTRA PKPAVEANAN EDEDNQDSDW LSHMGSAHVN RNVPVGNNGA ASSSEVRSHV SKLASIDSFD
401: SRWQDFLEPG ESVVLISKLK KINKLSNKKV QLILTNKPQL ICVDPAKMVT KGNISWSANP SELNVQVGNS SHFRICTPKK VFVFEDAKQR AWQWKNAIED
501: LQNCQKI
001: MLAMEKEFDS KLVLQGNSSN GANVSRSKSF SFKAPQENFT SHDFEFGKIY GVGSYSKVVR AKKKETGTVY ALKIMDKKFI TKENKTAYVK LERIVLDQLE
101: HPGIIKLYFT FQDTSSLYMA LESCEGGELF DQITRKGRLS EDEARFYTAE VVDALEYIHS MGLIHRDIKP ENLLLTSDGH IKIADFGSVK PMQDSQITVL
201: PNAASDDKAC TFVGTAAYVP PEVLNSSPAT FGNDLWALGC TLYQMLSGTS PFKDASEWLI FQRIIARDIK FPNHFSEAAR DLIDRLLDTE PSRRPGAGSE
301: GYVALKRHPF FNGVDWKNLR SQTPPKLAPD PASQTASPER DDTHGSPWNL THIGDSLATQ NEGHSAPPTS SESSGSITRL ASIDSFDSRW QQFLEPGESV
401: LMISAVKKLQ KITSKKVQLI LTNKPKLIYV DPSKLVVKGN IIWSDNSNDL NVVVTSPSHF KICTPKKVLS FEDAKQRASV WKKAIETLQN R
101: HPGIIKLYFT FQDTSSLYMA LESCEGGELF DQITRKGRLS EDEARFYTAE VVDALEYIHS MGLIHRDIKP ENLLLTSDGH IKIADFGSVK PMQDSQITVL
201: PNAASDDKAC TFVGTAAYVP PEVLNSSPAT FGNDLWALGC TLYQMLSGTS PFKDASEWLI FQRIIARDIK FPNHFSEAAR DLIDRLLDTE PSRRPGAGSE
301: GYVALKRHPF FNGVDWKNLR SQTPPKLAPD PASQTASPER DDTHGSPWNL THIGDSLATQ NEGHSAPPTS SESSGSITRL ASIDSFDSRW QQFLEPGESV
401: LMISAVKKLQ KITSKKVQLI LTNKPKLIYV DPSKLVVKGN IIWSDNSNDL NVVVTSPSHF KICTPKKVLS FEDAKQRASV WKKAIETLQN R
Arabidopsis Description
PDPK13-phosphoinositide-dependent protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XF67]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.