Factsheet for TraesCS5D01G122400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G383400.1
TraesCS3B01G415800.1
TraesCS3D01G376500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G36350.1	TraesCS3A01G383400.1	AT5G04510.1	16973627
AT2G36350.1	TraesCS3B01G415800.1	AT5G04510.1	16973627
AT2G36350.1	TraesCS3D01G376500.1	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G107300.1	Wheat	cytosol	98.73	98.73
TraesCS5B01G115200.1	Wheat	cytosol	98.34	98.34
HORVU5Hr1G035610.2	Barley	cytosol	96.56	96.44
Os12t0480200-01	Rice	cytosol	48.66	88.84
EES17014	Sorghum	cytosol	83.18	82.66
Zm00001d041063_P001	Maize	cytosol	81.78	81.27
Bra005275.1-P	Field mustard	cytosol	13.12	63.58
GSMUA_Achr10P...	Banana	cytosol	53.76	60.98
GSMUA_Achr11P...	Banana	cytosol	53.76	58.86
GSMUA_Achr8P16090_001	Banana	nucleus	54.65	56.82
TraesCS2D01G291200.1	Wheat	cytosol	55.29	55.5
GSMUA_Achr6P13320_001	Banana	cytosol	50.32	54.41
CDY13336	Canola	cytosol, plastid	42.8	48.28
Bra040842.1-P	Field mustard	cytosol	4.59	48.0
Bra039602.1-P	Field mustard	cytosol	4.59	48.0
KRH62499	Soybean	cytosol	49.68	47.16
TraesCS5D01G174500.1	Wheat	cytosol	34.01	46.6
KRH56412	Soybean	cytosol	49.3	46.35
VIT_06s0061g01540.t01	Wine grape	cytosol	51.47	45.96
VIT_08s0007g03600.t01	Wine grape	cytosol	49.94	45.37
TraesCS5D01G460900.1	Wheat	cytosol, mitochondrion	29.94	45.37
TraesCS7D01G218000.1	Wheat	cytosol, plastid	33.38	45.33
TraesCS5D01G261300.1	Wheat	cytosol	32.99	44.89
CDX67542	Canola	cytosol	45.73	44.71
CDX75049	Canola	cytosol	40.76	44.26
TraesCS3D01G129100.1	Wheat	cytosol	27.13	43.83
KRH32674	Soybean	cytosol	47.9	43.57
KRH30833	Soybean	cytosol	47.77	43.3
KRH67882	Soybean	cytosol	48.03	43.28
TraesCS5D01G137200.1	Wheat	plastid	25.73	43.25
KRG96169	Soybean	cytosol	47.77	43.2
PGSC0003DMT400018337	Potato	cytosol	46.88	43.14
Solyc11g067070.1.1	Tomato	cytosol	45.86	43.06
PGSC0003DMT400068291	Potato	cytosol	45.86	42.96
Solyc06g074480.2.1	Tomato	cytosol	46.75	42.92
CDX84133	Canola	cytosol	41.27	42.13
TraesCS5D01G044800.1	Wheat	plasma membrane	25.35	41.63
TraesCS3D01G164700.1	Wheat	cytosol	31.85	41.46
TraesCS1D01G220100.1	Wheat	cytosol, plastid	33.12	40.56
Bra028538.1-P	Field mustard	cytosol	46.24	40.56
Bra019641.1-P	Field mustard	cytosol	40.51	40.36
KRH23770	Soybean	cytosol	41.78	40.34
Bra005280.1-P	Field mustard	cytosol	45.1	39.86
CDX76251	Canola	cytosol	41.4	39.49
TraesCS1D01G124200.2	Wheat	cytosol	31.21	39.39
TraesCS6D01G225100.1	Wheat	cytosol	33.12	39.33
AT3G52890.4	Thale cress	cytosol	46.37	38.97
TraesCS2D01G391000.1	Wheat	cytosol	33.76	38.29
CDX70297	Canola	cytosol	42.04	37.63
AT5G03640.1	Thale cress	nucleus	44.33	37.58
Bra009522.1-P	Field mustard	cytosol	42.55	37.28
AT2G36350.1	Thale cress	cytosol	44.97	37.2
CDY10368	Canola	cytosol	42.8	37.17
Solyc10g083500.1.1	Tomato	nucleus	47.39	37.01
PGSC0003DMT400072395	Potato	nucleus	47.39	37.01
Solyc09g009380.2.1	Tomato	cytosol	47.52	36.57
PGSC0003DMT400006862	Potato	cytosol	47.26	36.37
CDX73596	Canola	cytosol	45.22	35.32
CDX78131	Canola	cytosol	45.1	35.05
Bra006955.1-P	Field mustard	cytosol	45.1	33.91
TraesCS4D01G222200.1	Wheat	nucleus	22.29	33.78

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF176
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5D01G122400	EnsemblPlants:TraesCS5D01G122400.1
TIGR:cd05574	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:177170193..177173236

Molecular Weight (calculated)

86096.2 Da

IEP (calculated)

7.339

GRAVY (calculated)

-0.379

Length

785 amino acids

Sequence
(BLAST)

001: MGSSGCSSEI VESNEDLGNA PVSGSSVLHI NVKTEEKDGR RRGHPVEDEL DQLLKAIDSR TYRRALSPGQ AGADSLLKHA QKTPRSGSSQ IAVPGICSKP
101: VNMKQALRRH CISQASEMAA MKRLSMSPGS SSSSEAGTIH RLYASLMVQS SDGSLVHDDK KNLIEISITP EKISKNLSRG TSGFSEDCDF ETADGSAVTS
201: IHSASSTSTD IQKVRIQDVI SGDPVESESS IVQNGKTHKQ VSAATDDSPS RIPILIKPIT TSRLVKPVFR CKTSSKSKMK EEQPSLGNSS NSTKFCSSKE
301: SISHVSTSSS SASSISNPTS CAEGEINPGP EKSDERSSEW LTLERGECSQ NSKSSISEYG CSTSISDESQ FGLCGYNNRP HMVKDLCWIT IRQLALQQGP
401: LGLDNFRLLK RLGCGDIGTV YLAELVHSDC LFALKVMDIE YLISRRKMLR AQAEREILEM LDHPFLPTLY AHFTTDNLSC LVMEYCPGGD LHVLRQRQPG
501: RSFPEPSARF YVAEVLLALE YLHMLGVIYR DLKPENILVR DDGHIMLSDF DLSLRCSVSA VLLRSSSVAA NHQPKKLTSP CAESYCINSS CLQPSCAQTS
601: CFRPRPWVPK PRKPKSSLKG LPQLVVEPTE ARSNSFVGTH EYLAPEIIKG DGHGSAVDWW TFGVFLYELV YGRTPFRGPG NDETLANVVS QNLRFPDNPV
701: VSSNAKDLIR GLLVKEPENR LGTLRGAAEI KQHPFFEGLN WALIRSAAPP ETRPCDVVTL ATVRKKKEGK CLDFRSAEEL EFEVF

Best Arabidopsis Sequence Match ( AT2G36350.1 )
(BLAST)

001: MESFAGSCEI VEEKDAVRLA KHSSRYCMSP LGSSKDMEQR PALKSGYQGS MEYDIDQLFQ SITIKPSPRR VMGSSFHHLE TSASAGTSRS TSPSNKGAMK
101: KPFPMGTPRS PRVGPSDSIS LKQALRDLCI SKASEMASQK RLSKSAAASP RVSEADRIKT LYRQVLNESA GKPGLPVDKG KSLVEISLTP VVDIPSSSQS
201: VPQRYDVLET EPSNFISEPS QAEILLHVLG NGSGIKTVGY GMLETVSLCK SNKSGSCLSS GSGDYEIEID ENHTSPPHMV IEDQLVEIDK HVTSLPSCSG
301: SKVDTEELDK SIVSSARVKS EPTALSSGLK GKLDNFPGSG TEKSKLVSKV TRNIPRPKPR PKKKILLKKK LKIVVNSATK MVEEVDTSLE PSASQLLCQK
401: CHCAVKSTST ENHPPSNTSH TTDKNVSIEA DQESLASPRL IRIVKCNKEA SKGSSDSCEV SDSGEAVIVM KQEVSPSNYS GKGDADEQIR ANPTSSEKFD
501: FSLSSKNSLG DYSSSTSMSE ESNLSRFSCG NKPHMSMDVR WEAVKHVKLQ YGSLGLRHFN LLKKLGCGDI GTVYLAELVG TNCLFAIKVM DNEFLARRKK
601: TPRAQAERAI LKMLDHPFLP TLYAQFTSDN LSCLVMEYCP GGDLHVLRQK QLSRCFSEPA TRFYVAEILL ALEYLHMLGV IYRDLKPENI LVREDGHIML
701: TDFDLSLRCA VNPTLLRSTS PPEKDPARMS GPYSTSNCIQ PLCIEPSCRV PCFSPRLLST QARNQKPRKP KRPDLLTQQF RSLPQLVAEP TEARSNSFVG
801: THEYLAPEII KGEGHGAAVD WWTFGVLLYE LLYGKTPFKG YDNEETLSNV VYQNLKFPDS PLVSFQAKEL IRRLLVKDPE SRLGSEKGAA EIKRHPFFEG
901: LNWALIRCAI PPELPDIYDN GATEATSPEG NNRYLECKAI GDHLEFELF

Arabidopsis Description

KIPK2Serine/threonine-protein kinase KIPK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.