Factsheet for Solyc10g083500.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g071750.2.1
Solyc11g007760.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G36350.1	Solyc03g071750.2.1	AT5G04510.1	16973627
AT2G36350.1	Solyc11g007760.1.1	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072395	Potato	nucleus	97.21	97.21
Bra005275.1-P	Field mustard	cytosol	11.64	72.22
Solyc09g009380.2.1	Tomato	cytosol	71.34	70.29
Os12t0480200-01	Rice	cytosol	28.66	66.98
Bra039602.1-P	Field mustard	cytosol	4.38	58.67
Bra040842.1-P	Field mustard	cytosol	4.28	57.33
CDY13336	Canola	cytosol, plastid	39.6	57.18
VIT_08s0007g03600.t01	Wine grape	cytosol	48.96	56.94
KRH30833	Soybean	cytosol	47.86	55.54
KRH32674	Soybean	cytosol	47.66	55.5
Solyc12g017390.1.1	Tomato	cytosol	25.27	54.39
KRH67882	Soybean	cytosol	46.27	53.39
CDX75049	Canola	cytosol	38.31	53.25
KRG96169	Soybean	cytosol	45.97	53.23
CDX67542	Canola	cytosol	41.89	52.43
CDX84133	Canola	cytosol	40.1	52.41
GSMUA_Achr10P...	Banana	cytosol	34.93	50.72
Solyc02g087510.2.1	Tomato	cytosol	26.17	50.58
HORVU2Hr1G072580.1	Barley	cytosol	39.2	50.32
TraesCS2D01G291200.1	Wheat	cytosol	38.81	49.87
TraesCS2A01G292800.1	Wheat	cytosol	38.81	49.81
TraesCS2B01G309900.1	Wheat	cytosol	38.71	49.74
Bra005280.1-P	Field mustard	cytosol	43.88	49.66
Bra028538.1-P	Field mustard	cytosol	44.08	49.5
AT3G52890.4	Thale cress	cytosol	45.67	49.14
Bra019641.1-P	Field mustard	cytosol	38.51	49.11
EES17014	Sorghum	cytosol	38.41	48.86
Solyc04g015130.2.1	Tomato	cytosol, plastid	29.25	48.43
OQU81510	Sorghum	cytosol	38.71	48.08
Zm00001d003812_P002	Maize	cytosol	38.21	48.06
Solyc07g065710.2.1	Tomato	plastid	28.86	48.01
GSMUA_Achr11P...	Banana	cytosol	34.23	47.98
Zm00001d041063_P001	Maize	cytosol	37.71	47.97
Zm00001d025342_P003	Maize	cytosol	38.31	47.95
TraesCS5A01G107300.1	Wheat	cytosol	37.31	47.77
CDX76251	Canola	cytosol	39.1	47.75
GSMUA_Achr8P16090_001	Banana	nucleus	35.82	47.68
AT2G36350.1	Thale cress	cytosol	44.88	47.52
TraesCS5B01G115200.1	Wheat	cytosol	37.11	47.52
HORVU5Hr1G035610.2	Barley	cytosol	37.11	47.46
TraesCS5D01G122400.1	Wheat	cytosol	37.01	47.39
Solyc11g067070.1.1	Tomato	cytosol	39.4	47.37
Solyc10g005770.2.1	Tomato	plastid	28.76	47.15
Solyc12g006690.1.1	Tomato	nucleus, plastid	21.59	46.97
Solyc06g074480.2.1	Tomato	cytosol	39.9	46.9
GSMUA_Achr6P13320_001	Banana	cytosol	33.43	46.28
Solyc11g067080.1.1	Tomato	nucleus	20.9	45.45
Solyc02g093360.2.1	Tomato	cytosol	27.96	44.96
AT5G03640.1	Thale cress	nucleus	41.39	44.92
Solyc11g007250.1.1	Tomato	nucleus	20.4	44.66
CDX70297	Canola	cytosol	38.91	44.58
Bra009522.1-P	Field mustard	cytosol	39.7	44.53
CDY10368	Canola	cytosol	39.6	44.03
Solyc02g067830.2.1	Tomato	cytosol	27.16	43.54
Solyc01g090240.2.1	Tomato	cytosol	29.65	42.57
CDX73596	Canola	cytosol	42.29	42.29
CDX78131	Canola	cytosol	42.19	41.98
Bra006955.1-P	Field mustard	cytosol	42.89	41.28
Solyc07g056400.1.1	Tomato	nucleus	18.81	39.13
Solyc10g038190.1.1	Tomato	cytosol	26.87	38.74
Os04t0410200-00	Rice	cytosol	19.0	37.97

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	UniProt:K4D3D7
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF92
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc10g083500.1	EnsemblPlants:Solyc10g083500.1.1
UniParc:UPI0002769DBA	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:+:63291123..63295265

Molecular Weight (calculated)

110041.0 Da

IEP (calculated)

9.596

GRAVY (calculated)

-0.499

Length

1005 amino acids

Sequence
(BLAST)

0001: MGSFRANCEI VESKDEAELF QHSRRFNQVL EPDRKQQKPP LARKGAGKYI GDDINQLFES INVRTSKSLD LTDHVRRDAS KRPMRGGGSN SPVTGFSDPV
0101: SLKQAFRGLC ISQAAEMAAM RRLSKPPGSP SGLEPGRITC SSRFAGPSES GFLRSERLLQ DESISGGLHK LSHNPHERYV KSANHSPRSS PRFAIKPFNM
0201: SQNGRVVPAE SMSSSVPQHI QESRLKSPGQ SALSSPRYAS KPSIKSTESI SRQSERILSA ENVLGSRKKD FLQPPEANMR SSSQTALSSP QIGDKPVTKQ
0301: AESVVPQNER TGGAESISGF FNMIPDYPEP MKSPHQGAIS SPRLVAAQAL QLTTSSLQET KNAQPSNYHE IKPLGTASTK EKTQTAVPSS SSCESSNVVL
0401: VSGPKRSPDN QKRNVVTSFR VANKAALKLR RKGRSQTVPS SNVVKGNKES KSRRSTSRSI KPPVKNKYLV KKKLKEEVAL AAGTFNLCYE INGPTESPSQ
0501: LICQRCQCTL EGAGKESSEE PAKQISGCMT VGASENSTSC AANGYNNSGP PVLKFNKTSK SREQGEFSQS SKSSIGDYST STTISEESNL SGSFSGNRPH
0601: MSKDGRWEAI NQVRKHYGFL GLSHFNLLKK LGCGDIGTVY LAELLETNCL FAIKVMDNEY LARRKKLPRA QTEREILRIL DHPFLPTLYA QFTSDNLSCL
0701: VMEFCSGGDL HVLRQKQPGR YFSEPAARFY VAEVLLALEY LHMLGVVYRD LKPENILVRE DGHIMLTDFD LSLRCSVNPT LLQSSSLGVE APRISGPCAG
0801: SNCIDPFCAG PSCQVSCFSP RVLPGTAKAR KLKAEAAASL NRSLPQLVVE PTEARSNSFV GTHEYLAPEI IKGEGHGSAV DWWTLGVFLY ELLYGKTPFK
0901: GAGNEETLAN VVLQNLRFPD SQIVSFQARD LIRGLLVKEP ENRLGTETGA AEIKRHPFFD GLNWALIRCA VPPQVPGVTK VALEEKSKKF LECGSTGEHL
1001: EFELF

Best Arabidopsis Sequence Match ( AT3G52890.2 )
(BLAST)

001: MGSFAGACEI VEEKDDEVRL PKHSGRYGKS VMGSSSKDLV ERKQREYHGS LEYDIDMLFQ SISVKPSTTR LMSSSFHHHE TSASAGPSRT TSPSKRIASM
101: KKPGTPQSPR FVGLSDSVSL KQALRDRCIS KASEMAAQKR LSKSAAASPR VSEADRIKSL YNQVSNESTS SRSGLVPVDK GKGSLVEIPL MPVNDKPSSS
201: KSVPQRFEDP SNPISEPSQA GTSFGLQGVG NQTREIKLLH RSNKPGSCLS SGSGDYEIEL DENVASPSTH AFVEDDVIEI DKHVTSLPSH SSKKVNATEL
301: DKNISSSAVD SEQKGKLDDA PNSGTENGKT VRKVTRMIPR PKQPKKKILL KKKLKIGVVS ATYPTKDDEE IVPSLDSSAN QLLCQRCHCS LKSTSIDDNP
401: PSYTSSHNPK ICTDSLSSVS NKEAHQGSDE NSSGSCNVSQ SSEADIVIMK QDVSSSNNSG IGAMVEKETE NPTSSEKFEF SLSSKDSLGD YSRSTSISEE
501: SNLSRFSCGN KPHMSMDVRW EAIKHIKVQY GSLGLRHFNL LKKLGCGDIG TVYLAELIGT NCLFAIKVMD NEFLARRKKS PRAQAEREIL KMLDHPFLPT
601: LYAQFTSDNL SCLVMEYCPG GDLHVLRQKQ LGRCFPEPAA RFYVAEILLA LEYLHMLGII YRDLKPENIL VREDGHIMLT DFDLSLRCAV NPTLVRSNSP
701: PGKDPARISG PYNTSNCIQP FCITEPSCQV SCFSPRLSSN QQQGRKPKRG DHLSKTQQHL SRSLPQLVAE PTEARSNSFV GTHEYLAPEI IKGEGHGAAV
801: DWWTFGVLLY ELLYGKTPFK GYNNDETLAN VVLQNLKFPD SPLVSFQAKD LIRGLLVKEP ENRLGSEKGS VEIKRHPFFE GLNWALIRCA IPPELPDFYE
901: YGGGPEAAAD SPGGSNNRYL ECKAIGDHLE FELF

Arabidopsis Description

KIPK1Serine/threonine-protein kinase KIPK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.