Factsheet for Solyc07g056400.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g071750.2.1
Solyc11g007760.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53700.1	Solyc03g071750.2.1	AT5G04510.1	16973627
AT1G53700.1	Solyc11g007760.1.1	AT5G04510.1	16973627
AT3G14370.1	Solyc03g071750.2.1	AT5G04510.1	16973627
AT3G14370.1	Solyc11g007760.1.1	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079838	Potato	nucleus	96.69	97.09
KRH43840	Soybean	cytosol	65.42	68.4
KRH13630	Soybean	nucleus	67.08	67.78
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	65.42	66.67
AT1G53700.1	Thale cress	cytosol	62.53	63.45
Bra041025.1-P	Field mustard	nucleus	64.39	63.21
CDY67737	Canola	nucleus	64.39	63.21
CDY30659	Canola	nucleus	64.18	63.14
CDX98447	Canola	nucleus	61.49	62.66
AT3G14370.1	Thale cress	nucleus	62.11	62.5
Bra027344.1-P	Field mustard	nucleus	61.9	62.42
CDX97569	Canola	nucleus	61.9	62.42
GSMUA_Achr4P21830_001	Banana	cytosol	44.31	48.2
GSMUA_Achr4P18040_001	Banana	cytosol	44.51	47.67
Os03t0253200-01	Rice	nucleus	42.65	40.55
TraesCS4D01G222200.1	Wheat	nucleus	43.27	40.35
TraesCS4B01G221800.1	Wheat	nucleus	43.06	40.23
TraesCS4A01G082200.1	Wheat	nucleus	42.86	39.88
Solyc12g006690.1.1	Tomato	nucleus, plastid	38.1	39.83
EER95166	Sorghum	nucleus	43.27	39.81
HORVU4Hr1G062610.1	Barley	nucleus, vacuole	42.86	39.43
Zm00001d028447_P001	Maize	nucleus	42.65	38.94
Solyc12g017390.1.1	Tomato	cytosol	36.44	37.69
Solyc11g067080.1.1	Tomato	nucleus	35.61	37.23
Solyc11g007250.1.1	Tomato	nucleus	33.95	35.73
Solyc02g087510.2.1	Tomato	cytosol	37.89	35.19
Solyc04g015130.2.1	Tomato	cytosol, plastid	41.61	33.11
Solyc07g065710.2.1	Tomato	plastid	41.2	32.95
Solyc10g005770.2.1	Tomato	plastid	40.99	32.3
Solyc02g093360.2.1	Tomato	cytosol	40.58	31.36
Solyc02g067830.2.1	Tomato	cytosol	38.51	29.67
Solyc01g090240.2.1	Tomato	cytosol	41.61	28.71
Solyc10g038190.1.1	Tomato	cytosol	40.17	27.83
Solyc11g067070.1.1	Tomato	cytosol	38.92	22.49
Solyc06g074480.2.1	Tomato	cytosol	38.1	21.52
Solyc09g009380.2.1	Tomato	cytosol	40.17	19.02
Solyc10g083500.1.1	Tomato	nucleus	39.13	18.81

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
UniProt:K4CGH3	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351
PANTHER:PTHR24351:SF82	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc07g056400.1
EnsemblPlants:Solyc07g056400.1.1	UniParc:UPI000276B070	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:+:64265632..64267083

Molecular Weight (calculated)

54799.3 Da

IEP (calculated)

9.455

GRAVY (calculated)

-0.431

Length

483 amino acids

Sequence
(BLAST)

001: MEELDALYPP DSDLDLSFTS CASITTTTTD RTLSARSSLA RSSLTLSFND RLSCTSSTNN PSAEIPNFHR RAHRQHDPNW SAIKAVTTLS SDGSLHLRHL
101: KLHRLVGSGN LGRVFLCRLR DYDHANFALK VIDRDSLTAK KISHVQTEAE ILSSLDHPFL PTLYAHLEVS HYTCLLIDFC PNGDLHSLLR KQPGNRLPVD
201: SVRFYAAEVL IALEYLHSLG IVYRDLKPEN ILIREDGHIM LSDFDLCFKS EVSPKLDFTT RVLEGSRRRR NSCYGDRQRE ETVTEFVSEP TSAFSRSCVG
301: THEYLAPELV SGAGHGNGVD WWAFGVLLYE LLYGTTPFKG SSKESTLRNI ASSKGVKFYV DETQGEEAEL RDLIEKLLVK DPRKRLGCTR GATDIKRHPF
401: FAGIKWPLIR TYRPPEVRGI TIKRTKSKAH VSHVTGFSSS PRIRRRCLWK KLGYLMRIKG SKYNLNSNHN YYCHTNHKVR KCA

Best Arabidopsis Sequence Match ( AT3G14370.1 )
(BLAST)

001: MEQEDFYFPD TDLDLSFTST TTDRTFASSS ARTSLTLSFN DRLSTSSAVT TSSTSSSSVN HRRHDPHWSA IKSAKLLSSD GNIHLRHLKL IRHLGTGNLG
101: RVFLCNLRDS SARFALKVID RNCLTTEKKL SQVETEAEIL SLLDHPFLPT LYARIDESHY TCLLIDYAPN GDLHSLLRKQ PGNRLPIQPV RFFAAEVLVA
201: LEYLHAMGIV YRDLKPENVL LREDGHVMLS DFDLCFKSDV VPTFKSRRYR RSSSSPSLRR RRSGCFSVAA EKKYEREEIV SEFAAEPVTA FSRSCVGTHE
301: YLAPELVSGN GHGSGVDWWA FGIFLYELLY GTTPFKGESK EQTLRNIVST TKTASFHMDG DLDEARDLIE KLLVKDPRKR LGCARGAQDI KRHPFFDGIK
401: WPLIRHYKPP EEVRGLVIKK STRPHASHVI AVSPRRRKSF LWRALSYLLR GKSSSGGSKN QSNSNYYHYV GKSYASRKRV

Arabidopsis Description

WAG2WAG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VAK4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.