Factsheet for TraesCS4A01G082200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G383400.1
TraesCS3B01G415800.1
TraesCS3D01G376500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53700.1	TraesCS3A01G383400.1	AT5G04510.1	16973627
AT1G53700.1	TraesCS3B01G415800.1	AT5G04510.1	16973627
AT1G53700.1	TraesCS3D01G376500.1	AT5G04510.1	16973627
AT3G14370.1	TraesCS3A01G383400.1	AT5G04510.1	16973627
AT3G14370.1	TraesCS3B01G415800.1	AT5G04510.1	16973627
AT3G14370.1	TraesCS3D01G376500.1	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G222200.1	Wheat	nucleus	98.27	98.46
TraesCS4B01G221800.1	Wheat	nucleus	96.92	97.29
HORVU4Hr1G062610.1	Barley	nucleus, vacuole	94.8	93.71
Os03t0253200-01	Rice	nucleus	84.2	86.02
EER95166	Sorghum	nucleus	83.24	82.29
Zm00001d028447_P001	Maize	nucleus	82.85	81.29
GSMUA_Achr4P21830_001	Banana	cytosol	49.9	58.33
GSMUA_Achr4P18040_001	Banana	cytosol	50.67	58.31
KRH43840	Soybean	cytosol	41.04	46.1
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	40.85	44.73
KRH13630	Soybean	nucleus	40.08	43.51
PGSC0003DMT400079838	Potato	nucleus	39.88	43.04
Solyc07g056400.1.1	Tomato	nucleus	39.88	42.86
AT1G53700.1	Thale cress	cytosol	39.31	42.86
CDY30659	Canola	nucleus	40.08	42.36
CDY67737	Canola	nucleus	39.88	42.07
Bra041025.1-P	Field mustard	nucleus	39.88	42.07
CDX98447	Canola	nucleus	38.15	41.77
TraesCS5A01G375200.1	Wheat	plastid	36.8	41.7
AT3G14370.1	Thale cress	nucleus	38.54	41.67
CDX97569	Canola	nucleus	38.34	41.54
Bra027344.1-P	Field mustard	nucleus	38.34	41.54
TraesCS5A01G037100.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	36.42	39.62
TraesCS3A01G128200.1	Wheat	cytosol	36.99	39.59
TraesCS5A01G129700.1	Wheat	plastid	31.79	34.66
TraesCS1A01G133200.1	Wheat	cytosol	32.76	30.69
TraesCS5A01G253500.1	Wheat	cytosol	32.76	29.46
TraesCS5A01G170100.1	Wheat	cytosol	32.37	29.32
TraesCS1A01G218500.1	Wheat	cytosol, plastid	35.84	29.15
TraesCS5A01G450900.1	Wheat	plastid	31.6	28.82
TraesCS6A01G242800.1	Wheat	cytosol	35.84	28.53
TraesCS7A01G216200.1	Wheat	cytosol, plastid	31.6	28.37
TraesCS3A01G157100.1	Wheat	cytosol	32.37	28.24
TraesCS2A01G392900.1	Wheat	cytosol	34.1	25.54
TraesCS2A01G292800.1	Wheat	cytosol	34.1	22.61
TraesCS5A01G107300.1	Wheat	cytosol	33.72	22.29

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF82
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4A01G082200	EnsemblPlants:TraesCS4A01G082200.1
TIGR:cd05574	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:85568814..85570373

Molecular Weight (calculated)

56683.3 Da

IEP (calculated)

9.931

GRAVY (calculated)

-0.299

Length

519 amino acids

Sequence
(BLAST)

001: MEAPHIHPPM DVHEPAPPSP LFSDISPHFP LSIADAGAGA LDLSFTSTAS ASTSSFTTAT TFSARSSLSL PSFSSSTSLS PRPHSSSTSQ HWTHLAAARA
101: ATPDGVLRLA HLHLVRELGQ GHLARVFLCR LKSSPPASPL FALKVVDLRD DDPSRVCHVL AESRVLSSLD HPFVPTLYAR LDAGRYACFL MDYCSGGDLH
201: SVLRRRPGGR LPVAAARFYA AEVLLALEYL HVLGFVYRDL KPENVLLRGD GHVVLSDFDL ALPASVEPAV RRRQVRQQSQ RRKRSLLPSC FSSNRGSDED
301: DVDAKERFEF VAEPTAANSK DCVGTHEYLA PELVSGNGHG NGVDWWAFGV FLYELVYGRT PFKGPAKDVT LKNILSKQVT YPKLDGEAEA AAQLKDLVGR
401: LLERDPRRRM GSARGAAEIK RHPFFAGVDW ALIRCVTPPV VPEADAAAAA SPASAARQAK LGSWNSLGGS SFKKSSSFKK SSSFGRRSSY EERQGVFRKL
501: MSWNHESRSK KTKTSRMKP

Best Arabidopsis Sequence Match ( AT1G53700.1 )
(BLAST)

001: MEDDGYYLDT DLDLSFTSTA TDRTFTSSSA RSSLARSSLT LSFNDRLSTA TTPSTTTSSA ATTLHHRRYD PHWTSIRAAT TLSSDGRLHL RHFKLVRHLG
101: TGNLGRVFLC HLRDCPNPTG FALKVIDRDV LTAKKISHVE TEAEILSLLD HPFLPTLYAR IDASHYTCLL IDYCPNGDLH SLLRKQPNNR LPISPVRFFA
201: AEVLVALEYL HALGIVYRDL KPENILIRED GHIMLSDFDL CFKADVVPTF RSRRFRRTSS SPRKTRRGGG CFSTEVEYER EEIVAEFAAE PVTAFSKSCV
301: GTHEYLAPEL VAGNGHGSGV DWWAFGIFLY EMLYGTTPFK GGTKEQTLRN IVSNDDVAFT LEEEGMVEAK DLIEKLLVKD PRKRLGCARG AQDIKRHEFF
401: EGIKWPLIRN YKPPEIRGLV KKTKAHAGHV TAAVTPRRNK WLWWALSHLL RSKSLSKSSS KIQSNNNYYH YVGKKL

Arabidopsis Description

WAG1Serine/threonine-protein kinase WAG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.