Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- mitochondrion 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G044800.1 | Wheat | plasma membrane | 96.86 | 96.65 |
| TraesCS5B01G037900.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 95.18 | 94.98 |
| HORVU5Hr1G009390.1 | Barley | cytosol, nucleus, plasma membrane | 91.61 | 90.48 |
| Os12t0614600-01 | Rice | cytosol | 76.94 | 75.83 |
| Zm00001d031068_P001 | Maize | plastid | 74.42 | 72.3 |
| OQU79615 | Sorghum | cytosol, plastid | 73.38 | 69.31 |
| TraesCS5A01G375200.1 | Wheat | plastid | 63.73 | 66.38 |
| GSMUA_Achr7P01120_001 | Banana | nucleus | 58.07 | 65.48 |
| CDX84294 | Canola | cytosol, plastid | 49.69 | 53.99 |
| VIT_10s0003g04320.t01 | Wine grape | cytosol, plastid | 50.73 | 53.66 |
| GSMUA_Achr5P02480_001 | Banana | nucleus | 52.41 | 53.65 |
| Bra021925.1-P | Field mustard | cytosol | 49.27 | 53.53 |
| Bra005403.1-P | Field mustard | cytosol | 49.06 | 53.3 |
| CDY17273 | Canola | cytosol | 49.06 | 53.3 |
| CDY43662 | Canola | cytosol | 49.06 | 53.3 |
| AT2G34650.1 | Thale cress | cytosol | 48.85 | 53.2 |
| KRH59216 | Soybean | cytosol | 50.52 | 52.39 |
| KRH21098 | Soybean | cytosol, plastid | 48.85 | 51.55 |
| TraesCS3A01G128200.1 | Wheat | cytosol | 45.7 | 44.95 |
| TraesCS5A01G129700.1 | Wheat | plastid | 39.2 | 39.29 |
| TraesCS4A01G082200.1 | Wheat | nucleus | 39.62 | 36.42 |
| TraesCS5A01G170100.1 | Wheat | cytosol | 42.98 | 35.78 |
| TraesCS1A01G133200.1 | Wheat | cytosol | 40.67 | 35.02 |
| TraesCS5A01G253500.1 | Wheat | cytosol | 41.93 | 34.66 |
| TraesCS5A01G450900.1 | Wheat | plastid | 40.25 | 33.74 |
| TraesCS7A01G216200.1 | Wheat | cytosol, plastid | 40.67 | 33.56 |
| TraesCS3A01G157100.1 | Wheat | cytosol | 41.51 | 33.28 |
| TraesCS6A01G242800.1 | Wheat | cytosol | 44.03 | 32.21 |
| TraesCS1A01G218500.1 | Wheat | cytosol, plastid | 42.77 | 31.97 |
| TraesCS2A01G392900.1 | Wheat | cytosol | 42.77 | 29.44 |
| TraesCS2A01G292800.1 | Wheat | cytosol | 42.35 | 25.8 |
| TraesCS5A01G107300.1 | Wheat | cytosol | 41.72 | 25.35 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:11.2.4.1.2 | MapMan:18.4.6.5 | Gene3D:3.30.200.20 | GO:GO:0000003 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0048364 | GO:GO:0048367 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24351 |
| PANTHER:PTHR24351:SF60 | InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS5A01G037100 |
| EnsemblPlants:TraesCS5A01G037100.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:34262293..34263726
Molecular Weight (calculated)
51500.6 Da
IEP (calculated)
9.499
GRAVY (calculated)
-0.147
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAAVRAPVP RKPPAEGTLL LAAEEGLSDL DTASSTGAPN SSLSSASSAG SLARCSSLSR LSFDCTPSAA MSAAACSPRP SAAFRPHRSG DVAWAAIRAL
101: SAASPATPLG PADFRLVRRV GGGDIGTVYL CRLRASAEAE APSCMYAMKV IDRRAVAKKH KLERAAAEKR ILRLLDHPFL PTLFADFDAA PRFSCVVMEF
201: CPGGDLHSLR HRMPSRRFPL PSARFYAAEV LLALEYLHMM GIVYRDLKPE NVLIRADGHI MLTDFDLSLQ STSSPSLEPA VPEEEEEEEP RSASCFPIRF
301: RRRRHRRRCA ASPPRFVAEP VSARSCSFVG THEYVAPEVA GGGAHGAAVD WWAYGVFLYE LLHGRTPFAG ATNEDTLRNI VRAPLTFPTS SSGTGCHADV
401: AAARDLIARL LTKDPAARLG SRHGAADVKA HPFFKSLNLA LLRSSRPPVV PSAPLHRSQS CKTPASRKPD TQRFDLF
101: SAASPATPLG PADFRLVRRV GGGDIGTVYL CRLRASAEAE APSCMYAMKV IDRRAVAKKH KLERAAAEKR ILRLLDHPFL PTLFADFDAA PRFSCVVMEF
201: CPGGDLHSLR HRMPSRRFPL PSARFYAAEV LLALEYLHMM GIVYRDLKPE NVLIRADGHI MLTDFDLSLQ STSSPSLEPA VPEEEEEEEP RSASCFPIRF
301: RRRRHRRRCA ASPPRFVAEP VSARSCSFVG THEYVAPEVA GGGAHGAAVD WWAYGVFLYE LLHGRTPFAG ATNEDTLRNI VRAPLTFPTS SSGTGCHADV
401: AAARDLIARL LTKDPAARLG SRHGAADVKA HPFFKSLNLA LLRSSRPPVV PSAPLHRSQS CKTPASRKPD TQRFDLF
001: MLRESDGEMS LGTTNSPISS GTESCSSFSR LSFDAPPSTI PEEESFLSLK PHRSSDFAYA EIRRRKKQGL TFRDFRLMRR IGAGDIGTVY LCRLAGDEEE
101: SRSSYFAMKV VDKEALALKK KMHRAEMEKT ILKMLDHPFL PTLYAEFEAS HFSCIVMEYC SGGDLHSLRH RQPHRRFSLS SARFYAAEVL VALEYLHMLG
201: IIYRDLKPEN ILVRSDGHIM LSDFDLSLCS DSIAAVESSS SSPENQQLRS PRRFTRLARL FQRVLRSKKV QTLEPTRLFV AEPVTARSGS FVGTHEYVAP
301: EVASGGSHGN AVDWWAFGVF LYEMIYGKTP FVAPTNDVIL RNIVKRQLSF PTDSPATMFE LHARNLISGL LNKDPTKRLG SRRGAAEVKV HPFFKGLNFA
401: LIRTLTPPEI PSSVVKKPMK SATFSGRSSN KPAAFDYF
101: SRSSYFAMKV VDKEALALKK KMHRAEMEKT ILKMLDHPFL PTLYAEFEAS HFSCIVMEYC SGGDLHSLRH RQPHRRFSLS SARFYAAEVL VALEYLHMLG
201: IIYRDLKPEN ILVRSDGHIM LSDFDLSLCS DSIAAVESSS SSPENQQLRS PRRFTRLARL FQRVLRSKKV QTLEPTRLFV AEPVTARSGS FVGTHEYVAP
301: EVASGGSHGN AVDWWAFGVF LYEMIYGKTP FVAPTNDVIL RNIVKRQLSF PTDSPATMFE LHARNLISGL LNKDPTKRLG SRRGAAEVKV HPFFKGLNFA
401: LIRTLTPPEI PSSVVKKPMK SATFSGRSSN KPAAFDYF
Arabidopsis Description
PIDPID [Source:UniProtKB/TrEMBL;Acc:A0A178VTE5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.