CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG92082
KRG94975
KRH02749
KRH18664
KRH19119
KRH21098
KRH22182
KRH25972
KRH27149
KRH34704
KRH39071
KRH41847
KRH48642
KRH55477
KRH59216

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34650.1	KRH39071	AT1G73590.1	17889649
AT2G34650.1	KRH41847	AT1G73590.1	17889649
AT2G34650.1	KRH48642	AT1G73590.1	17889649
AT2G34650.1	KRH21098	AT2G34650.1	12857841
AT2G34650.1	KRH59216	AT2G34650.1	12857841
AT2G34650.1	KRG89812	AT2G41100.1	12857841
AT2G34650.1	KRG94975	AT2G41100.1	12857841
AT2G34650.1	KRH18664	AT2G41100.1	12857841
AT2G34650.1	KRG92082	AT5G04510.1	16601102
AT2G34650.1	KRH34704	AT5G04510.1	16601102
AT2G34650.1	KRH22182	AT5G54490.1	12857841
AT2G34650.1	KRH25972	AT5G54490.1	12857841
AT2G34650.1	KRH27149	AT5G54490.1	12857841
AT2G34650.1	KRH55477	AT5G54490.1	12857841
AT2G34650.1	KRH02749	AT5G57090.1	17889649
AT2G34650.1	KRH19119	AT5G57090.1	17889649

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59216	Soybean	cytosol	76.33	75.0
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	70.58	70.73
CDY17273	Canola	cytosol	66.15	68.11
CDX84294	Canola	cytosol, plastid	65.93	67.88
Bra005403.1-P	Field mustard	cytosol	65.71	67.65
Bra021925.1-P	Field mustard	cytosol	65.27	67.2
CDY43662	Canola	cytosol	65.27	67.2
AT2G34650.1	Thale cress	cytosol	64.38	66.44
GSMUA_Achr7P01120_001	Banana	nucleus	53.32	56.97
TraesCS5B01G377300.1	Wheat	plastid	49.56	52.21
Os12t0614600-01	Rice	cytosol	52.88	49.38
TraesCS5A01G375200.1	Wheat	plastid	49.78	49.13
TraesCS5A01G037100.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	51.55	48.85
Zm00001d033234_P001	Maize	plastid	50.88	48.83
HORVU5Hr1G009390.1	Barley	cytosol, nucleus, plasma membrane	51.55	48.24
Os03t0642300-00	Rice	plastid	49.12	48.16
EER93759	Sorghum	plastid	50.88	48.12
TraesCS5D01G044800.1	Wheat	plasma membrane	50.88	48.12
TraesCS5B01G037900.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	50.66	47.91
OQU79615	Sorghum	cytosol, plastid	53.32	47.72
Zm00001d031068_P001	Maize	plastid	51.55	47.45
GSMUA_Achr5P02480_001	Banana	nucleus	46.9	45.49
KRH56632	Soybean	plastid	48.01	44.47
KRH63005	Soybean	nucleus	47.79	44.26
KRH03726	Soybean	plastid	47.57	43.88
KRG92038	Soybean	cytosol	40.93	43.84
KRH34744	Soybean	cytosol	39.38	43.0
HORVU5Hr1G093040.2	Barley	plastid	49.56	42.5
KRH25188	Soybean	nucleus, plastid	40.93	42.43
KRH30493	Soybean	cytosol, plastid	40.71	41.72
KRH26592	Soybean	nucleus	41.15	41.06
KRH43840	Soybean	cytosol	40.71	39.83
KRH22717	Soybean	nucleus	41.59	37.83
KRH13630	Soybean	nucleus	39.82	37.66
KRH44814	Soybean	cytosol	41.59	33.57
KRH13830	Soybean	cytosol	42.7	33.51
KRH43612	Soybean	cytosol	43.14	33.28
KRH36626	Soybean	cytosol	44.47	33.06
KRH11623	Soybean	cytosol	42.26	32.32
KRG93211	Soybean	cytosol	43.58	32.19
KRH07149	Soybean	cytosol	44.69	32.01
KRG94078	Soybean	cytosol, plastid	44.69	32.01
KRH48818	Soybean	cytosol	45.58	27.0
KRH66511	Soybean	nucleus	45.58	27.0
KRH01064	Soybean	cytosol	44.91	26.43
KRH40174	Soybean	cytosol	44.69	26.37
KRH62499	Soybean	cytosol	44.69	24.43
KRH56412	Soybean	cytosol	44.47	24.07
KRH32674	Soybean	cytosol	44.91	23.52
KRH30833	Soybean	cytosol	44.91	23.44
KRG96169	Soybean	cytosol	43.14	22.47
KRH23770	Soybean	cytosol	40.27	22.39
KRH67882	Soybean	cytosol	42.92	22.27

Protein Annotations

EntrezGene:100795536	MapMan:11.2.4.1.2	MapMan:18.4.6.5	EMBL:ACUP02008338	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G220100
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	UniProt:I1M1I1	InterPro:IPR000719	EnsemblPlants:KRH21098	ProteinID:KRH21098	ProteinID:KRH21098.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF177
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0000E64AEA	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:33350896..33353681

Molecular Weight (calculated)

50553.9 Da

IEP (calculated)

8.158

GRAVY (calculated)

-0.323

Length

452 amino acids

Sequence
(BLAST)

001: METGGGRDSG MSSETINSST QRTSMSNESV CSTSFSRLSF DLPPPSSSPE TLFVKPHRSS DFAYSAILRR KSALTFRDFH LLRRIGAGDI GTVYLCRLRH
101: DAGDEDDDED PCFYAMKVVD KEAVALKKKA QRAEMERKIL KMVDHPFLPT LYAEFEASNF SCIVMEYCSG GDLHSLQHNH PNNRFSLSSA RFYAAEVLVA
201: LEYLHMLGII YRDLKPENVL VRSDGHIMLS DFDLSLCSDA IPAVESPDCS LDPAFAPALR YTRQYSTPFS CLSNRVFRSR KVQTLQPNRL FVAEPVGARS
301: CSFVGTHEYV SPEVASGNSH GNAVDWWSFG IFIYEMVYGR TPFAGSSNEA TLRSIIKKPL AFPTSTPSST LEMHARDLIS GLLNKDPNRR LGSKRGSADV
401: KKHPFFAGLN LALIRTVTPP EVPSLRRHKT TPFYYPANVN NSRQQLTAFD YF

Best Arabidopsis Sequence Match ( AT2G34650.1 )
(BLAST)

001: MLRESDGEMS LGTTNSPISS GTESCSSFSR LSFDAPPSTI PEEESFLSLK PHRSSDFAYA EIRRRKKQGL TFRDFRLMRR IGAGDIGTVY LCRLAGDEEE
101: SRSSYFAMKV VDKEALALKK KMHRAEMEKT ILKMLDHPFL PTLYAEFEAS HFSCIVMEYC SGGDLHSLRH RQPHRRFSLS SARFYAAEVL VALEYLHMLG
201: IIYRDLKPEN ILVRSDGHIM LSDFDLSLCS DSIAAVESSS SSPENQQLRS PRRFTRLARL FQRVLRSKKV QTLEPTRLFV AEPVTARSGS FVGTHEYVAP
301: EVASGGSHGN AVDWWAFGVF LYEMIYGKTP FVAPTNDVIL RNIVKRQLSF PTDSPATMFE LHARNLISGL LNKDPTKRLG SRRGAAEVKV HPFFKGLNFA
401: LIRTLTPPEI PSSVVKKPMK SATFSGRSSN KPAAFDYF

Arabidopsis Description

PIDPID [Source:UniProtKB/TrEMBL;Acc:A0A178VTE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.