CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG93519
KRG96023
KRH18485
KRH19897
KRH21098
KRH32507
KRH59216
KRH67730

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73590.1	KRH21098	AT2G34650.1	17889649
AT1G73590.1	KRH59216	AT2G34650.1	17889649
AT1G73590.1	KRG96023	AT2G36910.1	17237354
AT1G73590.1	KRH19897	AT2G36910.1	17237354
AT1G73590.1	KRH32507	AT2G36910.1	17237354
AT1G73590.1	KRH67730	AT2G36910.1	17237354
AT1G73590.1	KRG93519	AT3G28860.1	17237354
AT1G73590.1	KRH18485	AT3G28860.1	17237354

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48642	Soybean	plasma membrane	87.23	86.94
VIT_17s0000g02420.t01	Wine grape	plasma membrane	82.42	83.67
KRH39071	Soybean	plasma membrane	57.21	82.14
Solyc03g118740.2.1	Tomato	golgi, plasma membrane	81.09	80.03
PGSC0003DMT400014752	Potato	golgi, plasma membrane	81.26	79.8
CDX82059	Canola	golgi, plasma membrane	68.82	78.9
CDX96484	Canola	plasma membrane	68.49	77.2
CDY47745	Canola	golgi, plasma membrane	72.31	75.96
Bra008105.1-P	Field mustard	golgi, plasma membrane	75.46	73.86
AT1G73590.1	Thale cress	plasma membrane	75.95	73.63
Bra015983.1-P	Field mustard	plasma membrane	75.12	73.3
KRH66749	Soybean	plasma membrane	71.48	72.19
KRH18110	Soybean	extracellular	14.93	71.43
CDY72296	Canola	golgi, plasma membrane	53.23	70.86
KRG95082	Soybean	plasma membrane	54.56	68.4
KRH38202	Soybean	plasma membrane	68.49	65.14
KRH50369	Soybean	plasma membrane	68.82	62.41
KRG89296	Soybean	plasma membrane	68.82	62.31
KRH02749	Soybean	plasma membrane	64.84	61.38
KRH49577	Soybean	plasma membrane	56.22	60.97
KRH19119	Soybean	endoplasmic reticulum	64.51	60.59
KRH37366	Soybean	plasma membrane	42.95	58.47
KRH15941	Soybean	plasma membrane	48.92	55.56
KRH12968	Soybean	plasma membrane	45.27	55.49
KRH40132	Soybean	plasma membrane	31.34	52.79
KRH58174	Soybean	endoplasmic reticulum, plasma membrane	31.68	52.76
KRH04363	Soybean	endoplasmic reticulum, plasma membrane	31.68	52.62
KRH01128	Soybean	plasma membrane	31.18	52.37
KRH37897	Soybean	plasma membrane	42.29	52.36
KRH18109	Soybean	plasma membrane	28.19	48.57
KRH12361	Soybean	endoplasmic reticulum, golgi	34.83	44.78
KRH00905	Soybean	golgi, plasma membrane, vacuole	27.36	44.72
KRH40330	Soybean	golgi, plasma membrane, vacuole	26.87	42.97
CDX85566	Canola	cytosol	2.82	6.16

Protein Annotations

EntrezGene:100786572	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	EMBL:ACUP02004781	InterPro:Auxin_eff_plant	EnsemblPlantsGene:GLYMA_08G054700
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005886	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009719	GO:GO:0009734	GO:GO:0009926	GO:GO:0009987	GO:GO:0010252	GO:GO:0010315
GO:GO:0010329	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:I1KQK9	EMBL:KC344369
EnsemblPlants:KRH41847	ProteinID:KRH41847	ProteinID:KRH41847.1	InterPro:Mem_trans	PFAM:PF03547	PANTHER:PTHR31752
PANTHER:PTHR31752:SF14	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI00023380E9	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:4214611..4218504

Molecular Weight (calculated)

66042.9 Da

IEP (calculated)

8.723

GRAVY (calculated)

0.054

Length

603 amino acids

Sequence
(BLAST)

001: MITLTDFYHV MTAMVPLYVA MILAYGSVKW WKIFSPDQCS GINRFVALFA VPLLSFHFIA SNNPYEMNFR FIAADTLQKM IVLVVLGIWA NVSKRGCLEW
101: TITLFSISTL PNTLVMGIPL LKGMYGEFSG SLMVQIVVLQ CIIWYTLMLF MFEYRGARLL ISEQFPDTAG TIVSIHVDSD VMSLDGRQHP LETDAQIKED
201: GKLHVTVRKS NASRSDIFSR RSQGFSSTTP RPSNLTNAEI YSLQSSRNPT PRGSSFNHTD FYSMMAAGRN SNFGANDVYG LSASRGPTPR PSNYDEDASN
301: NNNGKPRYHY PAAGTGTGTG TGTGTGTGHY PAPNPGMFSP TASKNVAKKP DDPNKDLHMF VWSSSASPVS DVFGGGHEYD HKELKLTVSP GKVEGNINRD
401: TQEEYQPEKD EFSFGNRGIE DEHEGEKVGN GNPKTMPPAS VMTRLILIMV WRKLIRNPNT YSSLIGLTWS LISFRWNVKM PAIIAKSISI LSDAGLGMAM
501: FSLGLFMALQ PRIIACGNST AAFSMAVRFL TGPAVMAAAS IAVGLKGVLL HVAIVQAALP QGIVPFVFAK EYNVHPDILS TGVIFGMLIA LPITLVYYIL
601: LGL

Best Arabidopsis Sequence Match ( AT1G73590.1 )
(BLAST)

001: MITAADFYHV MTAMVPLYVA MILAYGSVKW WKIFTPDQCS GINRFVALFA VPLLSFHFIA ANNPYAMNLR FLAADSLQKV IVLSLLFLWC KLSRNGSLDW
101: TITLFSLSTL PNTLVMGIPL LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD IMSLDGRQPL ETEAEIKEDG
201: KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK
301: PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND
401: HQKDVKISVP QGNSNDNQYV EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY SSLFGITWSL ISFKWNIEMP
501: ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST
601: AVIFGMLIAL PITLLYYILL GL

Arabidopsis Description

PIN1Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178WFG7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.