Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50369 | Soybean | plasma membrane | 95.05 | 95.19 |
| KRH38202 | Soybean | plasma membrane | 79.88 | 83.91 |
| VIT_01s0011g04860.t01 | Wine grape | golgi, plasma membrane | 79.88 | 81.97 |
| KRH49577 | Soybean | plasma membrane | 68.17 | 81.65 |
| CDY25767 | Canola | plasma membrane | 69.82 | 81.15 |
| CDX96288 | Canola | golgi, plasma membrane | 70.72 | 80.79 |
| CDY12491 | Canola | plasma membrane | 69.52 | 80.66 |
| CDY68262 | Canola | plasma membrane | 70.72 | 80.65 |
| PGSC0003DMT400078330 | Potato | golgi, plasma membrane | 78.53 | 79.97 |
| Bra012358.1-P | Field mustard | golgi, plasma membrane | 72.37 | 79.93 |
| Solyc05g008060.2.1 | Tomato | nucleus | 78.08 | 79.63 |
| CDY23471 | Canola | golgi, plasma membrane | 58.86 | 79.51 |
| CDY63826 | Canola | plasma membrane | 66.67 | 78.86 |
| CDX68327 | Canola | plasma membrane | 57.36 | 78.76 |
| AT1G23080.1 | Thale cress | plasma membrane | 73.12 | 78.68 |
| CDY40380 | Canola | plasma membrane | 66.37 | 78.65 |
| Solyc04g007690.2.1 | Tomato | plasma membrane | 72.22 | 78.47 |
| AT1G70940.1 | Thale cress | plasma membrane | 75.23 | 78.28 |
| CDX91695 | Canola | plasma membrane | 65.32 | 76.18 |
| AT2G01420.2 | Thale cress | plasma membrane | 70.27 | 75.97 |
| PGSC0003DMT400015267 | Potato | cytosol | 52.7 | 75.65 |
| CDY41467 | Canola | plasma membrane | 66.07 | 75.34 |
| Bra016366.1-P | Field mustard | golgi, plasma membrane | 65.92 | 75.17 |
| Bra003938.1-P | Field mustard | golgi, plasma membrane | 61.11 | 74.54 |
| Bra016173.1-P | Field mustard | plasma membrane | 67.57 | 71.2 |
| GSMUA_Achr8P29780_001 | Banana | golgi, plasma membrane, vacuole | 51.35 | 70.66 |
| KRH18110 | Soybean | extracellular | 13.21 | 69.84 |
| GSMUA_Achr7P17140_001 | Banana | plasma membrane | 60.51 | 69.24 |
| Os01t0643300-01 | Rice | golgi, plasma membrane, vacuole | 63.96 | 68.93 |
| KRH41847 | Soybean | golgi, plasma membrane | 62.31 | 68.82 |
| CDY09501 | Canola | plasma membrane | 57.96 | 68.44 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 62.16 | 68.2 |
| KRH66749 | Soybean | plasma membrane | 61.11 | 68.17 |
| KRH48642 | Soybean | plasma membrane | 61.71 | 67.93 |
| TraesCS3D01G221900.1 | Wheat | plasma membrane | 59.76 | 67.46 |
| TraesCS3A01G231500.1 | Wheat | plasma membrane | 59.31 | 66.39 |
| Zm00001d044083_P001 | Maize | plasma membrane | 59.61 | 65.08 |
| KRG95082 | Soybean | plasma membrane | 46.7 | 64.66 |
| KRH39071 | Soybean | plasma membrane | 40.09 | 63.57 |
| EES01159 | Sorghum | golgi, plasma membrane | 60.36 | 61.56 |
| KRH02749 | Soybean | plasma membrane | 58.26 | 60.91 |
| KRH19119 | Soybean | endoplasmic reticulum | 57.96 | 60.12 |
| Os05t0576900-01 | Rice | golgi, plasma membrane, vacuole | 51.8 | 58.38 |
| Zm00001d045219_P001 | Maize | plasma membrane | 50.9 | 58.35 |
| TraesCS3B01G260700.1 | Wheat | plasma membrane | 53.15 | 58.13 |
| KRH37366 | Soybean | plasma membrane | 38.44 | 57.79 |
| EER89254 | Sorghum | golgi, plasma membrane, vacuole | 51.5 | 57.17 |
| TraesCS1D01G422900.1 | Wheat | golgi, plasma membrane, vacuole | 51.05 | 57.05 |
| TraesCS1B01G445400.1 | Wheat | golgi, plasma membrane, vacuole | 50.9 | 56.78 |
| KRH15941 | Soybean | plasma membrane | 44.89 | 56.31 |
| Bra026669.1-P | Field mustard | golgi, plasma membrane | 67.27 | 56.21 |
| TraesCS1A01G415400.1 | Wheat | golgi, plasma membrane, vacuole | 50.45 | 56.09 |
| KRH12968 | Soybean | plasma membrane | 40.24 | 54.47 |
| KRH01128 | Soybean | plasma membrane | 28.83 | 53.48 |
| KRH40132 | Soybean | plasma membrane | 28.68 | 53.35 |
| KRH37897 | Soybean | plasma membrane | 38.14 | 52.16 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 28.23 | 51.93 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 28.08 | 51.52 |
| KRH18109 | Soybean | plasma membrane | 27.03 | 51.43 |
| KRH00905 | Soybean | golgi, plasma membrane, vacuole | 24.62 | 44.44 |
| KRH12361 | Soybean | endoplasmic reticulum, golgi | 30.78 | 43.71 |
| KRH40330 | Soybean | golgi, plasma membrane, vacuole | 24.32 | 42.97 |
| HORVU7Hr1G038700.9 | Barley | nucleus, plastid | 22.97 | 22.01 |
Protein Annotations
| EntrezGene:100802247 | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EMBL:ACUP02012195 | InterPro:Auxin_eff_plant | EnsemblPlantsGene:GLYMA_20G014300 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009926 | GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010315 |
| GO:GO:0010329 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | UniProt:I1ND75 | EMBL:KC344384 |
| EnsemblPlants:KRG89296 | ProteinID:KRG89296 | ProteinID:KRG89296.1 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 |
| PANTHER:PTHR31752:SF36 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI000233DC92 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr20:-:1288066..1291831
Molecular Weight (calculated)
72220.4 Da
IEP (calculated)
7.739
GRAVY (calculated)
0.147
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: MITWGDFYTV MSAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS LNNPYAMNFR FIAADTLQKI IMLFALAIWT NFSANGSLEW
101: MITIFSLSTL PNTLVMGIPL LIAMYGEYSG LLMVQVVVLQ CIIWYTLLLF LFEYRGAKLL IMEQFPETAA SIVSFKVDSD VVSLDGRDFL ETDAEVGDDG
201: KLHVTVRKSN ASRRSFMMTP RPSNLTGAEI YSLSSSRNPT PRGSNFNHAD FYSMMGYAPR HSNFGAADLY SVQSTSRGVT PRPSNFEENG APAAATTQQQ
301: QQAISSPRFG FYPAVQTVPA AYPAPNPEFS SSGLTKSVSK NSQTQPQPQP QPQIQAQVAP PPQPQVAQPT NSGNKANHDA KELHMFVWSS STSPVSEAGG
401: LHVFSGADFG ASDQSGRSEQ GAKEIRMLVA DDHPQNGETN KAAAEGEFGG EELKFPGKEG EQADEEGEKA GPGGLNKLGS SSTAELHPKS AVAVAGKHMP
501: PASVMTRLIL IMVWRKLIRN PNTYSSLIGV IWSLVAFRWH VQMPKIIEKS ISILSDAGLG MAMFSLGLFM ALQPKIIACG NSVATFAMAV RFLTGPAVMA
601: AASIAVGLRG TLLRVAIVQA ALPQGIVPFV FAKEYNVHPA ILSTAVIFGM LIALPITLLY YILLGL
101: MITIFSLSTL PNTLVMGIPL LIAMYGEYSG LLMVQVVVLQ CIIWYTLLLF LFEYRGAKLL IMEQFPETAA SIVSFKVDSD VVSLDGRDFL ETDAEVGDDG
201: KLHVTVRKSN ASRRSFMMTP RPSNLTGAEI YSLSSSRNPT PRGSNFNHAD FYSMMGYAPR HSNFGAADLY SVQSTSRGVT PRPSNFEENG APAAATTQQQ
301: QQAISSPRFG FYPAVQTVPA AYPAPNPEFS SSGLTKSVSK NSQTQPQPQP QPQIQAQVAP PPQPQVAQPT NSGNKANHDA KELHMFVWSS STSPVSEAGG
401: LHVFSGADFG ASDQSGRSEQ GAKEIRMLVA DDHPQNGETN KAAAEGEFGG EELKFPGKEG EQADEEGEKA GPGGLNKLGS SSTAELHPKS AVAVAGKHMP
501: PASVMTRLIL IMVWRKLIRN PNTYSSLIGV IWSLVAFRWH VQMPKIIEKS ISILSDAGLG MAMFSLGLFM ALQPKIIACG NSVATFAMAV RFLTGPAVMA
601: AASIAVGLRG TLLRVAIVQA ALPQGIVPFV FAKEYNVHPA ILSTAVIFGM LIALPITLLY YILLGL
001: MISWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLR FIAADTLQKI IMLSLLVLWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEFRGAKML IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YNMMGFPGGR LSNFGPADMY SVQSSRGPTP RPSNFEENCA MASSPRFGYY
301: PGGGAGSYPA PNPEFSSTTT STANKSVNKN PKDVNTNQQT TLPTGGKSNS HDAKELHMFV WSSNGSPVSD RAGLNVFGGA PDNDQGGRSD QGAKEIRMLV
401: PDQSHNGETK AVAHPASGDF GGEQQFSFAG KEEEAERPKD AENGLNKLAP NSTAALQSKT GLGGAEASQR KNMPPASVMT RLILIMVWRK LIRNPNTYSS
501: LIGLIWALVA FRWHVAMPKI IQQSISILSD AGLGMAMFSL GLFMALQPKL IACGNSVATF AMAVRFLTGP AVMAVAAIAI GLRGDLLRVA IVQAALPQGI
601: VPFVFAKEYN VHPAILSTGV IFGMLIALPI TLVYYILLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEFRGAKML IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YNMMGFPGGR LSNFGPADMY SVQSSRGPTP RPSNFEENCA MASSPRFGYY
301: PGGGAGSYPA PNPEFSSTTT STANKSVNKN PKDVNTNQQT TLPTGGKSNS HDAKELHMFV WSSNGSPVSD RAGLNVFGGA PDNDQGGRSD QGAKEIRMLV
401: PDQSHNGETK AVAHPASGDF GGEQQFSFAG KEEEAERPKD AENGLNKLAP NSTAALQSKT GLGGAEASQR KNMPPASVMT RLILIMVWRK LIRNPNTYSS
501: LIGLIWALVA FRWHVAMPKI IQQSISILSD AGLGMAMFSL GLFMALQPKL IACGNSVATF AMAVRFLTGP AVMAVAAIAI GLRGDLLRVA IVQAALPQGI
601: VPFVFAKEYN VHPAILSTGV IFGMLIALPI TLVYYILLGL
Arabidopsis Description
PIN3Auxin efflux carrier component 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Z8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.