Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25767 | Canola | plasma membrane | 84.98 | 91.8 |
| Bra012358.1-P | Field mustard | golgi, plasma membrane | 89.01 | 91.38 |
| CDY12491 | Canola | plasma membrane | 84.33 | 90.94 |
| CDX91695 | Canola | plasma membrane | 79.32 | 85.99 |
| CDY41467 | Canola | plasma membrane | 80.29 | 85.1 |
| Bra016366.1-P | Field mustard | golgi, plasma membrane | 80.13 | 84.93 |
| AT1G70940.1 | Thale cress | plasma membrane | 87.24 | 84.38 |
| AT2G01420.2 | Thale cress | plasma membrane | 77.71 | 78.08 |
| Solyc05g008060.2.1 | Tomato | nucleus | 79.64 | 75.5 |
| PGSC0003DMT400078330 | Potato | golgi, plasma membrane | 79.64 | 75.38 |
| VIT_01s0011g04860.t01 | Wine grape | golgi, plasma membrane | 78.68 | 75.04 |
| Solyc04g007690.2.1 | Tomato | plasma membrane | 73.99 | 74.71 |
| KRH38202 | Soybean | plasma membrane | 76.25 | 74.45 |
| KRH50369 | Soybean | plasma membrane | 79.0 | 73.53 |
| KRG89296 | Soybean | plasma membrane | 78.68 | 73.12 |
| KRH49577 | Soybean | plasma membrane | 64.62 | 71.94 |
| PGSC0003DMT400015267 | Potato | cytosol | 51.53 | 68.75 |
| GSMUA_Achr8P29780_001 | Banana | golgi, plasma membrane, vacuole | 51.37 | 65.7 |
| GSMUA_Achr7P17140_001 | Banana | plasma membrane | 60.58 | 64.43 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 63.17 | 64.42 |
| Os01t0643300-01 | Rice | golgi, plasma membrane, vacuole | 63.49 | 63.59 |
| TraesCS3D01G221900.1 | Wheat | plasma membrane | 60.42 | 63.39 |
| TraesCS3A01G231500.1 | Wheat | plasma membrane | 60.74 | 63.19 |
| Zm00001d044083_P001 | Maize | plasma membrane | 61.07 | 61.97 |
| AT1G73590.1 | Thale cress | plasma membrane | 61.87 | 61.58 |
| EES01159 | Sorghum | golgi, plasma membrane | 60.74 | 57.58 |
| AT5G57090.1 | Thale cress | golgi, plasma membrane, vacuole | 59.13 | 56.57 |
| Zm00001d045219_P001 | Maize | plasma membrane | 52.67 | 56.11 |
| TraesCS1D01G422900.1 | Wheat | golgi, plasma membrane, vacuole | 53.96 | 56.04 |
| TraesCS1B01G445400.1 | Wheat | golgi, plasma membrane, vacuole | 53.96 | 55.95 |
| Os05t0576900-01 | Rice | golgi, plasma membrane, vacuole | 52.83 | 55.33 |
| TraesCS1A01G415400.1 | Wheat | golgi, plasma membrane, vacuole | 53.15 | 54.92 |
| TraesCS3B01G260700.1 | Wheat | plasma membrane | 53.8 | 54.68 |
| EER89254 | Sorghum | golgi, plasma membrane, vacuole | 52.99 | 54.67 |
| AT5G15100.1 | Thale cress | plasma membrane | 31.5 | 53.13 |
| AT1G77110.1 | Thale cress | plasma membrane | 45.72 | 49.65 |
| AT5G16530.1 | Thale cress | plasma membrane | 27.3 | 48.15 |
| HORVU7Hr1G038700.9 | Barley | nucleus, plastid | 24.07 | 21.44 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EntrezGene:838916 | ProteinID:AAC00611.1 | ProteinID:AEE30332.1 | ProteinID:AEE30333.1 |
| EMBL:AF087820 | ArrayExpress:AT1G23080 | EnsemblPlantsGene:AT1G23080 | RefSeq:AT1G23080 | TAIR:AT1G23080 | RefSeq:AT1G23080-TAIR-G |
| EnsemblPlants:AT1G23080.1 | TAIR:AT1G23080.1 | EMBL:AY052356 | Unigene:At.10543 | InterPro:Auxin_eff_plant | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009926 | GO:GO:0009942 | GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010315 | GO:GO:0010329 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | RefSeq:NP_564189.1 | RefSeq:NP_849700.1 |
| PFAM:PF03547 | Symbol:PIN7 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000256 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0006081 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF36 |
| UniProt:Q940Y5 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI00000482B1 | SEG:seg | : |
Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
Coordinates
chr1:-:8180189..8183650
Molecular Weight (calculated)
67592.1 Da
IEP (calculated)
7.949
GRAVY (calculated)
0.136
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.