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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G206200.2
TraesCS4B01G109800.2
TraesCS4D01G107200.1
TraesCS5A01G107900.1
TraesCS5B01G115400.1
TraesCS5D01G122800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G23080.1 TraesCS4A01G206200.2 AT1G35670.1 19130088
AT1G23080.1 TraesCS4B01G109800.2 AT1G35670.1 19130088
AT1G23080.1 TraesCS4D01G107200.1 AT1G35670.1 19130088
AT1G23080.1 TraesCS5A01G107900.1 AT1G35670.1 19130088
AT1G23080.1 TraesCS5B01G115400.1 AT1G35670.1 19130088
AT1G23080.1 TraesCS5D01G122800.1 AT1G35670.1 19130088
AT1G23080.1 TraesCS4A01G206200.2 AT4G09570.1 19130088
AT1G23080.1 TraesCS4B01G109800.2 AT4G09570.1 19130088
AT1G23080.1 TraesCS4D01G107200.1 AT4G09570.1 19130088
AT1G23080.1 TraesCS5A01G107900.1 AT4G09570.1 19130088
AT1G23080.1 TraesCS5B01G115400.1 AT4G09570.1 19130088
AT1G23080.1 TraesCS5D01G122800.1 AT4G09570.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G221900.1 Wheat plasma membrane 84.56 87.29
TraesCS3A01G231500.1 Wheat plasma membrane 84.24 86.22
HORVU3Hr1G057630.3 Barley plasma membrane 80.79 82.27
Os01t0643300-01 Rice golgi, plasma membrane, vacuole 72.58 71.52
Zm00001d044083_P001 Maize plasma membrane 66.01 65.9
GSMUA_Achr1P25190_001 Banana golgi, plasma membrane, vacuole 64.04 64.25
EES01159 Sorghum golgi, plasma membrane 67.49 62.94
CDY25767 Canola plasma membrane 55.5 58.99
CDY40380 Canola plasma membrane 54.19 58.72
CDX96288 Canola golgi, plasma membrane 55.99 58.49
CDY63826 Canola plasma membrane 54.02 58.44
CDY68262 Canola plasma membrane 55.99 58.39
CDY12491 Canola plasma membrane 54.68 58.01
CDY23471 Canola golgi, plasma membrane 46.14 57.0
CDX68327 Canola plasma membrane 44.99 56.49
Solyc04g007690.2.1 Tomato plasma membrane 56.65 56.28
KRH38202 Soybean plasma membrane 58.46 56.15
Bra012358.1-P Field mustard golgi, plasma membrane 55.5 56.05
TraesCS4B01G130100.1 Wheat plasma membrane 51.89 55.83
TraesCS7B01G095500.1 Wheat plasma membrane 53.2 55.29
KRH49577 Soybean plasma membrane 50.41 55.22
Solyc05g008060.2.1 Tomato nucleus 58.29 54.36
PGSC0003DMT400078330 Potato golgi, plasma membrane 58.29 54.28
VIT_01s0011g04860.t01 Wine grape golgi, plasma membrane 57.64 54.08
AT2G01420.2 Thale cress plasma membrane 54.52 53.9
AT1G23080.1 Thale cress plasma membrane 54.68 53.8
CDX91695 Canola plasma membrane 50.41 53.77
TraesCS1B01G445400.1 Wheat golgi, plasma membrane, vacuole 52.55 53.6
AT1G70940.1 Thale cress plasma membrane 56.32 53.59
KRH50369 Soybean plasma membrane 58.46 53.53
KRG89296 Soybean plasma membrane 58.13 53.15
CDY41467 Canola plasma membrane 50.25 52.4
Bra016366.1-P Field mustard golgi, plasma membrane 50.25 52.4
CDY09501 Canola plasma membrane 46.47 50.18
Bra003938.1-P Field mustard golgi, plasma membrane 44.17 49.27
TraesCS6B01G337300.3 Wheat plasma membrane 47.78 48.91
TraesCS7B01G398100.1 Wheat golgi, plasma membrane, vacuole 50.74 48.89
TraesCS3B01G276500.1 Wheat plasma membrane 28.08 47.9
PGSC0003DMT400015267 Potato cytosol 36.29 47.63
Bra016173.1-P Field mustard plasma membrane 48.77 46.99
Bra026669.1-P Field mustard golgi, plasma membrane 54.19 41.41
TraesCS5B01G283500.1 Wheat extracellular, plasma membrane, vacuole 24.79 41.03
TraesCS5B01G283600.1 Wheat plasma membrane 24.3 40.66
TraesCS3B01G462900.1 Wheat plasma membrane 24.14 39.95
TraesCS7B01G359300.1 Wheat plasma membrane, vacuole 23.15 35.34
TraesCS5B01G284900.1 Wheat golgi, plasma membrane, vacuole 21.35 34.48
TraesCS7B01G359200.1 Wheat plasma membrane 22.17 34.35
TraesCS3B01G361500.1 Wheat plasma membrane 23.81 33.88
TraesCS5B01G285000.1 Wheat plasma membrane 21.18 33.33
TraesCS7B01G331500.1 Wheat cytosol, plasma membrane, vacuole 22.17 33.25
Protein Annotations
EnsemblPlants:TraesCS3B01G260700.1EnsemblPlantsGene:TraesCS3B01G260700GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810
GO:GO:0008150GO:GO:0009921GO:GO:0009926GO:GO:0016020GO:GO:0016021GO:GO:0055085
InterPro:Auxin_eff_plantInterPro:Mem_transPANTHER:PTHR31752PANTHER:PTHR31752:SF37PFAM:PF03547SEG:seg
TIGRFAMs:TIGR00946TMHMM:TMhelixMapMan:11.2.4.1.1MapMan:24.2.5.2.1::
Description
No Description!
Coordinates
chr3B:+:418660059..418662607
Molecular Weight (calculated)
65385.3 Da
IEP (calculated)
8.021
GRAVY (calculated)
0.244
Length
609 amino acids
Sequence
(BLAST)
001: MISLHDLYTV LAAVVPLYVA MILAYGSVRW WGIFTPDQCS GINRFVAIFA VPLLSFHFIS TNDPYEMNLR FLAADTLQKF LVLALLAACS RLIPSRLDWS
101: ITLFSLSTLP NTLVMGIPLL VAMYGPYAGS LMVQIVVLQC IIWYTLLLFL FEFRAARMLI ADQFPDTAAS IVSLHVDPDV VSLEGGRAET ESEVAADGRL
201: HVTVRRSSVS RRSTLLVTPR PSNLTGAEIY SLSSSQNPTP RGSNFNQADF FAVVGGAPPA RVGDSSFGAS EHYSVQSSQR PTPRESNLEE HSAGPKQAMT
301: DAGAQHNHDA KELHMFVWSS SAFPVSEVVS GLPVFSGGTD AAHLDAAAKE IRMVVPADPP QNGSCKDNGG YTAAARGGGK AVEDDGDAVQ AGPDRPTAKL
401: NSSPGDEDGA ETGKHQMPPA SVMTRLILIM VWRKLIRNPN TYSSLIGLTW SLIAFRWHVS MPTMVEKSIS ILSDAGLGMA MFSLGGCPRP LCSCLRLALH
501: RVAPQLILPP RPPAHTPHAC ITPSTFAWAG LFMALQPSII ACGNSAAVAS MAVRFLAGPA ITAAASAAVG LRGTLLKVAI VQVTTHACQL KKHHACIHVK
601: RCFFFCMFS
Best Arabidopsis Sequence Match ( AT1G23080.1 )
(BLAST)
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.