Factsheet for Bra003938.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68327	Canola	plasma membrane	82.6	92.99
CDY23471	Canola	golgi, plasma membrane	83.33	92.29
AT1G70940.1	Thale cress	plasma membrane	90.84	77.5
Bra012358.1-P	Field mustard	golgi, plasma membrane	80.4	72.8
Bra016173.1-P	Field mustard	plasma membrane	80.4	69.46
Bra016366.1-P	Field mustard	golgi, plasma membrane	73.81	69.01
PGSC0003DMT400015267	Potato	cytosol	58.61	68.97
PGSC0003DMT400078330	Potato	golgi, plasma membrane	75.64	63.15
VIT_01s0011g04860.t01	Wine grape	golgi, plasma membrane	74.91	63.02
Solyc05g008060.2.1	Tomato	nucleus	75.27	62.94
Solyc04g007690.2.1	Tomato	plasma membrane	70.33	62.64
KRH38202	Soybean	plasma membrane	71.25	61.36
KRH50369	Soybean	plasma membrane	74.54	61.2
KRG89296	Soybean	plasma membrane	74.54	61.11
KRH49577	Soybean	plasma membrane	59.34	58.27
GSMUA_Achr1P25190_001	Banana	golgi, plasma membrane, vacuole	60.07	54.04
GSMUA_Achr8P29780_001	Banana	golgi, plasma membrane, vacuole	47.44	53.51
TraesCS3D01G221900.1	Wheat	plasma membrane	57.51	53.22
GSMUA_Achr7P17140_001	Banana	plasma membrane	56.41	52.92
TraesCS3A01G231500.1	Wheat	plasma membrane	57.33	52.6
Os01t0643300-01	Rice	golgi, plasma membrane, vacuole	58.97	52.1
Zm00001d044083_P001	Maize	plasma membrane	58.06	51.97
Bra015983.1-P	Field mustard	plasma membrane	57.69	50.97
Bra008105.1-P	Field mustard	golgi, plasma membrane	57.14	50.65
Bra026669.1-P	Field mustard	golgi, plasma membrane	70.51	48.31
EES01159	Sorghum	golgi, plasma membrane	57.69	48.24
Bra002763.1-P	Field mustard	plasma membrane	52.01	47.73
Bra006834.1-P	Field mustard	plasma membrane	55.49	47.2
TraesCS1D01G422900.1	Wheat	golgi, plasma membrane, vacuole	50.73	46.48
TraesCS1B01G445400.1	Wheat	golgi, plasma membrane, vacuole	50.37	46.06
Bra035648.1-P	Field mustard	plasma membrane	55.49	45.84
Zm00001d045219_P001	Maize	plasma membrane	48.72	45.78
Os05t0576900-01	Rice	golgi, plasma membrane, vacuole	49.08	45.35
TraesCS1A01G415400.1	Wheat	golgi, plasma membrane, vacuole	49.63	45.24
EER89254	Sorghum	golgi, plasma membrane, vacuole	49.08	44.67
TraesCS3B01G260700.1	Wheat	plasma membrane	49.27	44.17
Bra015694.1-P	Field mustard	plasma membrane	40.29	38.33
Bra008722.1-P	Field mustard	golgi, plasma membrane, vacuole	23.81	38.12
Bra008615.1-P	Field mustard	golgi, plasma membrane, vacuole	23.26	36.49
Bra023503.1-P	Field mustard	golgi, plasma membrane	21.61	19.77
HORVU7Hr1G038700.9	Barley	nucleus, plastid	24.36	19.14

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	InterPro:Auxin_eff_plant	EnsemblPlantsGene:Bra003938	EnsemblPlants:Bra003938.1	EnsemblPlants:Bra003938.1-P
GO:GO:0005575	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719
GO:GO:0009734	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4CIA5
InterPro:Mem_trans	PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF36	TIGRFAMs:TIGR00946	TMHMM:TMhelix
UniParc:UPI00025418EA	SEG:seg	:	:	:	:

Description

AT1G70940 (E=5e-235) PIN3, ATPIN3 | PIN3 (PIN-FORMED 3); auxin:hydrogen symporter/ transporter

Coordinates

chrA07:-:15854306..15856796

Molecular Weight (calculated)

58828.7 Da

IEP (calculated)

9.188

GRAVY (calculated)

-0.048

Length

546 amino acids

Sequence
(BLAST)

001: MISWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLR FIPETAASIV SFKVESDVVS LDGHDFLETD
101: AEIGNDGKLH VTVRKSNASR RSFCGPNMTP RPSNLTGAEI YSLSTTPRGS NFNQSDFYSM MGFPGGRLSN FGPADMYSMQ SSRGPTPRPS NFEENCAMAS
201: SPKFGYHPGG GGGSYPAPNP EFSSTSTANK VVNKTPKDTN TNQQTNLHTD GKSNNHDASS KELHMFVWSS NGSPVSDRAG LNAPDSGSNN EQGGRSDQGA
301: KEIRMLVPDQ SQNSENKALA RPASGDFGGE PVSITRREEG ERAKDAENGL NKPIPNALLQ SKTGLGAVPG GEASQGKHMP PASVMTRLIL IMVWRKLIRN
401: PNTYSSLIGL IWALVAFRWH VAMPKIIQQS ISILSDAGLG MAMFSLGLFM ALQPKLIACG NSVATFAMAV RFLTGPAVMA VASIAIGLRG DLLRVAIVQA
501: ALPQGIVPFV FAKEYNVHPA ILSTGVIFGM LIALPITLVY YILLGL

Best Arabidopsis Sequence Match ( AT1G70940.1 )
(BLAST)

001: MISWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLR FIAADTLQKI IMLSLLVLWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEFRGAKML IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YNMMGFPGGR LSNFGPADMY SVQSSRGPTP RPSNFEENCA MASSPRFGYY
301: PGGGAGSYPA PNPEFSSTTT STANKSVNKN PKDVNTNQQT TLPTGGKSNS HDAKELHMFV WSSNGSPVSD RAGLNVFGGA PDNDQGGRSD QGAKEIRMLV
401: PDQSHNGETK AVAHPASGDF GGEQQFSFAG KEEEAERPKD AENGLNKLAP NSTAALQSKT GLGGAEASQR KNMPPASVMT RLILIMVWRK LIRNPNTYSS
501: LIGLIWALVA FRWHVAMPKI IQQSISILSD AGLGMAMFSL GLFMALQPKL IACGNSVATF AMAVRFLTGP AVMAVAAIAI GLRGDLLRVA IVQAALPQGI
601: VPFVFAKEYN VHPAILSTGV IFGMLIALPI TLVYYILLGL

Arabidopsis Description

PIN3Auxin efflux carrier component 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Z8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.