Factsheet for Bra026669.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40380	Canola	plasma membrane	68.51	97.15
CDY63826	Canola	plasma membrane	67.88	96.09
AT2G01420.2	Thale cress	plasma membrane	67.38	87.18
Bra012358.1-P	Field mustard	golgi, plasma membrane	58.22	76.95
Bra016366.1-P	Field mustard	golgi, plasma membrane	53.45	72.95
Bra003938.1-P	Field mustard	golgi, plasma membrane	48.31	70.51
PGSC0003DMT400078330	Potato	golgi, plasma membrane	57.34	69.88
Solyc04g007690.2.1	Tomato	plasma membrane	53.7	69.82
Solyc05g008060.2.1	Tomato	nucleus	57.09	69.68
VIT_01s0011g04860.t01	Wine grape	golgi, plasma membrane	56.34	69.18
KRH49577	Soybean	plasma membrane	48.06	68.88
KRH38202	Soybean	plasma membrane	54.45	68.45
KRH50369	Soybean	plasma membrane	56.46	67.67
KRG89296	Soybean	plasma membrane	56.21	67.27
Bra016173.1-P	Field mustard	plasma membrane	52.82	66.61
GSMUA_Achr8P29780_001	Banana	golgi, plasma membrane, vacuole	38.52	63.43
PGSC0003DMT400015267	Potato	cytosol	36.89	63.36
GSMUA_Achr7P17140_001	Banana	plasma membrane	45.04	61.68
TraesCS3D01G221900.1	Wheat	plasma membrane	45.04	60.85
GSMUA_Achr1P25190_001	Banana	golgi, plasma membrane, vacuole	46.3	60.79
TraesCS3A01G231500.1	Wheat	plasma membrane	45.17	60.5
Zm00001d044083_P001	Maize	plasma membrane	46.17	60.33
Os01t0643300-01	Rice	golgi, plasma membrane, vacuole	46.42	59.87
Bra015983.1-P	Field mustard	plasma membrane	44.67	57.61
Bra008105.1-P	Field mustard	golgi, plasma membrane	44.42	57.47
Bra002763.1-P	Field mustard	plasma membrane	42.41	56.81
EES01159	Sorghum	golgi, plasma membrane	46.17	56.36
Bra006834.1-P	Field mustard	plasma membrane	44.29	54.98
Bra035648.1-P	Field mustard	plasma membrane	45.17	54.46
TraesCS3B01G260700.1	Wheat	plasma membrane	41.41	54.19
Zm00001d045219_P001	Maize	plasma membrane	38.9	53.36
TraesCS1D01G422900.1	Wheat	golgi, plasma membrane, vacuole	39.77	53.19
TraesCS1B01G445400.1	Wheat	golgi, plasma membrane, vacuole	39.77	53.1
EER89254	Sorghum	golgi, plasma membrane, vacuole	39.4	52.33
Os05t0576900-01	Rice	golgi, plasma membrane, vacuole	38.77	52.28
TraesCS1A01G415400.1	Wheat	golgi, plasma membrane, vacuole	39.02	51.92
Bra008722.1-P	Field mustard	golgi, plasma membrane, vacuole	21.08	49.27
Bra008615.1-P	Field mustard	golgi, plasma membrane, vacuole	21.2	48.56
Bra015694.1-P	Field mustard	plasma membrane	34.13	47.39
Bra023503.1-P	Field mustard	golgi, plasma membrane	18.95	25.29
HORVU7Hr1G038700.9	Barley	nucleus, plastid	18.07	20.72

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	InterPro:Auxin_eff_plant	EnsemblPlantsGene:Bra026669	EnsemblPlants:Bra026669.1	EnsemblPlants:Bra026669.1-P
GO:GO:0005575	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0009719	GO:GO:0009734	GO:GO:0009926	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0048364	GO:GO:0055085	UniProt:M4ED09	InterPro:Mem_trans	PFAM:PF03547	PANTHER:PTHR31752
PANTHER:PTHR31752:SF36	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI0002546C74	SEG:seg	:

Description

AT2G01420 (E=7e-294) PIN4, ATPIN4 | PIN4 (PIN-FORMED 4); auxin:hydrogen symporter/ transporter

Coordinates

chrA02:+:21300346..21309656

Molecular Weight (calculated)

87427.1 Da

IEP (calculated)

4.974

GRAVY (calculated)

-0.153

Length

797 amino acids

Sequence
(BLAST)

001: MITWHDLYTV LTAVVPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLR FIAADTLQKI IMLVLLGLWA SLTKKGSLEW
101: MITIFSLSTL PNTLVMGIPL LIAMYGVEAG SLMVQVVVLQ CIIWYTLLLF LFEYRGAKLL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAEIGNDG
201: KLHVTVRKSN ASRRSLMMTP RPSNLTGAEI YSMSSTPRGS NFNHSDFYSV MGFPGGRLSN FGPADMYSVQ SSRGPTPRPS NFEENNAVKY GFYPNSSVPG
301: PAGSYPAPNP EFSSGTAGST KPNKITKENQ ELETKGSHDA KELHMFVWSS SASPEHVAAE QSEQGAKEIR MVVSDPPRKS DVRGGDDMDA GEVQREIEKA
401: TAGLNKVGSN STAELEAAGG DAGGGRGKGT HMPPASVVTR LILIMVWRKL IRNPNTYSSL IGLIWALVAY RWHVAMPKIL QQSISILSDA GLGMAMFSLG
501: LFMALQPKII ACGNSVATFA MAVRFLTGPA IMAVASLIIG LHGDLLRIAI VQAALPQGIV PFVFAKEYNV HPTILSTAYY KRMYRELFGE DYESDYDGDD
601: SLSTPDTSDD EDAPVSGPTP NVTILHKSPP LSIRAQHHSS AVTQPSLRRD QNLAMTENSQ SNQSGSNSYP KTKEDPFHIL VEPVNSPDPL FYNPELVSSP
701: TLTLPADFKI PDSVPVPIPQ DPEPEPTSNP TEPADLQLRR LSNLEYFNQH LNVFGDKPAT PAYYKRMYRE LFGEDYESDY DGDDSLSTSD TSDDEDA

Best Arabidopsis Sequence Match ( AT2G01420.1 )
(BLAST)

001: MITWHDLYTV LTAVVPLYVA MILAYGSVQW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNDPYAMNFR FVAADTLQKI IMLVLLALWA NLTKNGSLEW
101: MITIFSLSTL PNTLVMGIPL LIAMYGTYAG SLMVQVVVLQ CIIWYTLLLF LFEYRGAKLL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAEIGNDG
201: KLHVTVRKSN ASRRSLMMTP RPSNLTGAEI YSLSSTPRGS NFNHSDFYSV MGFPGGRLSN FGPADLYSVQ SSRGPTPRPS NFEENNAVKY GFYNNTNSSV
301: PAAGSYPAPN PEFSTGTGVS TKPNKIPKEN QQQLQEKDSK ASHDAKELHM FVWSSSASPV SDVFGGGAGD NVATEQSEQG AKEIRMVVSD QPRKSGGDDI
401: GGLDSGEGER EIEKATAGLN KMGSNSTAEL EAAGGDGGGN NGTHMPPTSV MTRLILIMVW RKLIRNPNTY SSLIGLIWAL VAYRWHVAMP KILQQSISIL
501: SDAGLGMAMF SLGLFMALQP KIIACGNSVA TFAMAVRFIT GPAIMAVAGI AIGLHGDLLR IAIVQAALPQ GIVPFVFAKE YNVHPTILST GVIFGMLIAL
601: PITLVYYILL GL

Arabidopsis Description

PIN4Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178VZS2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.