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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G206200.2
TraesCS4B01G109800.2
TraesCS4D01G107200.1
TraesCS5A01G107900.1
TraesCS5B01G115400.1
TraesCS5D01G122800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G23080.1 TraesCS4A01G206200.2 AT1G35670.1 19130088
AT1G23080.1 TraesCS4B01G109800.2 AT1G35670.1 19130088
AT1G23080.1 TraesCS4D01G107200.1 AT1G35670.1 19130088
AT1G23080.1 TraesCS5A01G107900.1 AT1G35670.1 19130088
AT1G23080.1 TraesCS5B01G115400.1 AT1G35670.1 19130088
AT1G23080.1 TraesCS5D01G122800.1 AT1G35670.1 19130088
AT1G23080.1 TraesCS4A01G206200.2 AT4G09570.1 19130088
AT1G23080.1 TraesCS4B01G109800.2 AT4G09570.1 19130088
AT1G23080.1 TraesCS4D01G107200.1 AT4G09570.1 19130088
AT1G23080.1 TraesCS5A01G107900.1 AT4G09570.1 19130088
AT1G23080.1 TraesCS5B01G115400.1 AT4G09570.1 19130088
AT1G23080.1 TraesCS5D01G122800.1 AT4G09570.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G221900.1 Wheat plasma membrane 94.62 95.42
HORVU3Hr1G057630.3 Barley plasma membrane 91.43 90.97
TraesCS3B01G260700.1 Wheat plasma membrane 86.22 84.24
Os01t0643300-01 Rice golgi, plasma membrane, vacuole 82.35 79.29
Zm00001d044083_P001 Maize plasma membrane 74.79 72.95
GSMUA_Achr1P25190_001 Banana golgi, plasma membrane, vacuole 73.61 72.16
EES01159 Sorghum golgi, plasma membrane 76.13 69.37
CDY25767 Canola plasma membrane 64.2 66.67
CDY12491 Canola plasma membrane 63.53 65.85
CDY40380 Canola plasma membrane 62.02 65.66
CDX96288 Canola golgi, plasma membrane 64.2 65.52
CDY23471 Canola golgi, plasma membrane 54.29 65.52
CDY68262 Canola plasma membrane 64.2 65.41
CDY63826 Canola plasma membrane 61.85 65.36
CDX68327 Canola plasma membrane 53.28 65.36
TraesCS6A01G308600.1 Wheat plasma membrane 63.7 64.46
TraesCS4A01G188100.1 Wheat plasma membrane 61.01 63.91
Bra012358.1-P Field mustard golgi, plasma membrane 64.2 63.35
TraesCS7A01G190600.1 Wheat plasma membrane 61.85 62.69
Solyc04g007690.2.1 Tomato plasma membrane 64.03 62.15
KRH38202 Soybean plasma membrane 66.05 61.99
AT1G23080.1 Thale cress plasma membrane 63.19 60.74
AT2G01420.2 Thale cress plasma membrane 62.69 60.55
Solyc05g008060.2.1 Tomato nucleus 66.05 60.18
CDX91695 Canola plasma membrane 57.65 60.07
AT1G70940.1 Thale cress plasma membrane 64.54 60.0
PGSC0003DMT400078330 Potato golgi, plasma membrane 65.88 59.94
VIT_01s0011g04860.t01 Wine grape golgi, plasma membrane 65.38 59.94
KRH49577 Soybean plasma membrane 55.97 59.89
KRH50369 Soybean plasma membrane 66.72 59.7
KRG89296 Soybean plasma membrane 66.39 59.31
Bra016366.1-P Field mustard golgi, plasma membrane 57.82 58.9
CDY41467 Canola plasma membrane 57.82 58.9
TraesCS1A01G415400.1 Wheat golgi, plasma membrane, vacuole 58.99 58.6
Bra003938.1-P Field mustard golgi, plasma membrane 52.6 57.33
CDY09501 Canola plasma membrane 53.61 56.56
TraesCS3A01G243700.1 Wheat plasma membrane 33.28 55.46
PGSC0003DMT400015267 Potato cytosol 43.19 55.39
TraesCS7A01G492400.1 Wheat golgi, plasma membrane, vacuole 57.98 54.59
Bra016173.1-P Field mustard plasma membrane 56.81 53.48
TraesCS5A01G284500.1 Wheat extracellular, plasma membrane, vacuole 30.25 49.32
TraesCS3A01G426700.1 Wheat plasma membrane 29.58 46.68
TraesCS7A01G258800.1 Wheat plasma membrane, vacuole 28.57 46.32
Bra026669.1-P Field mustard golgi, plasma membrane 60.5 45.17
TraesCS5A01G286000.1 Wheat plasma membrane 25.55 42.58
TraesCS5A01G285700.1 Wheat golgi, plasma membrane, vacuole 26.72 41.09
TraesCS3A01G331300.1 Wheat plasma membrane 28.07 38.66
Protein Annotations
EnsemblPlants:TraesCS3A01G231500.1EnsemblPlantsGene:TraesCS3A01G231500GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810
GO:GO:0008150GO:GO:0009921GO:GO:0009926GO:GO:0016020GO:GO:0016021GO:GO:0055085
InterPro:Auxin_eff_plantInterPro:Mem_transPANTHER:PTHR31752PANTHER:PTHR31752:SF37PFAM:PF03547SEG:seg
TIGRFAMs:TIGR00946TMHMM:TMhelixMapMan:11.2.4.1.1MapMan:24.2.5.2.1::
Description
No Description!
Coordinates
chr3A:+:432040322..432043768
Molecular Weight (calculated)
63732.3 Da
IEP (calculated)
7.096
GRAVY (calculated)
0.327
Length
595 amino acids
Sequence
(BLAST)
001: MISLHDLYTV LAAVVPLYVA MILAYGSVRW WGIFTPDQCS GINRFVAIFA VPLLSFHFIS TNDPYEMNLR FLAADTLQKL LVLALLAVCS RLIPSRRAWV
101: PRLDWSITLF SLSTLPNTLV MGIPLLIAMY GPYAGSLMVQ IVVLQCIIWY TLLLFLFEFR AARLLIADQF PDTAASIVSL HVDPDVVSLE GGHAEAESEV
201: AADGRLHVTV SRSSVSRRST LLVTPRPSNL TGAEIYSLSS SQNPTPRGSN FNQADFFAVV GGAPPARVDG SSFGASEHYS LQSSQGPTPR ESNLDEHSAA
301: PKQAMTDAGA QHNHDAKELH MFVWSSSASP VSEVVSGLPV FSGGTGAAHL DAAAKEIRMV VPADPPQNGS CKENGSYTAA ARGCRKAVEH DGDAVQAGPD
401: RLTPRLNSSP GDEDGAETGR ARQHQMPPAS VMTRLILIMV WRKLIRNPNT YSSLIGLTWS LVAFRWHVSM PTMVEKSISI LSDAGLGMAM FSLGLFMALQ
501: PSIIACGNPA AVASMAVRFL AGPAVTAAAS AAVGLRGTLL KVAIVQAALP QGIVPFVFAK EYNVHPEILS TAVIFGMLIA LPITLAYYAL LGLVH
Best Arabidopsis Sequence Match ( AT1G23080.1 )
(BLAST)
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.