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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23471 Canola golgi, plasma membrane 96.08 94.52
Bra003938.1-P Field mustard golgi, plasma membrane 92.99 82.6
CDX96288 Canola golgi, plasma membrane 91.55 76.16
CDY68262 Canola plasma membrane 91.34 75.86
CDY25767 Canola plasma membrane 83.92 71.03
CDY12491 Canola plasma membrane 83.92 70.91
AT1G70940.1 Thale cress plasma membrane 91.96 69.69
CDY40380 Canola plasma membrane 76.91 66.37
CDX91695 Canola plasma membrane 77.73 66.02
CDY63826 Canola plasma membrane 76.29 65.72
CDY41467 Canola plasma membrane 78.35 65.07
PGSC0003DMT400015267 Potato cytosol 59.18 61.85
Solyc04g007690.2.1 Tomato plasma membrane 76.7 60.69
VIT_01s0011g04860.t01 Wine grape golgi, plasma membrane 79.79 59.63
CDY09501 Canola plasma membrane 69.28 59.57
KRH38202 Soybean plasma membrane 77.53 59.31
Solyc05g008060.2.1 Tomato nucleus 79.38 58.96
PGSC0003DMT400078330 Potato golgi, plasma membrane 79.38 58.87
KRH50369 Soybean plasma membrane 78.76 57.44
KRG89296 Soybean plasma membrane 78.76 57.36
CDX82059 Canola golgi, plasma membrane 62.06 57.22
CDX96484 Canola plasma membrane 63.09 57.2
GSMUA_Achr8P29780_001 Banana golgi, plasma membrane, vacuole 56.91 57.02
GSMUA_Achr7P17140_001 Banana plasma membrane 67.01 55.84
KRH49577 Soybean plasma membrane 63.92 55.76
GSMUA_Achr1P25190_001 Banana golgi, plasma membrane, vacuole 68.66 54.86
TraesCS3D01G221900.1 Wheat plasma membrane 65.36 53.73
TraesCS3A01G231500.1 Wheat plasma membrane 65.36 53.28
CDY47745 Canola golgi, plasma membrane 62.27 52.61
Os01t0643300-01 Rice golgi, plasma membrane, vacuole 67.01 52.59
Zm00001d044083_P001 Maize plasma membrane 65.57 52.13
CDY38263 Canola plasma membrane 58.76 49.31
CDY11886 Canola plasma membrane 61.86 48.47
EES01159 Sorghum golgi, plasma membrane 65.15 48.39
CDY20694 Canola plasma membrane 61.86 47.24
TraesCS1D01G422900.1 Wheat golgi, plasma membrane, vacuole 57.73 46.98
CDY53978 Canola plasma membrane 57.73 46.98
CDY69709 Canola plasma membrane 58.35 46.7
CDX88606 Canola plasma membrane 61.86 46.66
TraesCS1B01G445400.1 Wheat golgi, plasma membrane, vacuole 57.32 46.57
Zm00001d045219_P001 Maize plasma membrane 54.85 45.78
TraesCS1A01G415400.1 Wheat golgi, plasma membrane, vacuole 56.49 45.74
Os05t0576900-01 Rice golgi, plasma membrane, vacuole 55.46 45.52
EER89254 Sorghum golgi, plasma membrane, vacuole 55.88 45.17
TraesCS3B01G260700.1 Wheat plasma membrane 56.49 44.99
CDY72296 Canola golgi, plasma membrane 40.0 42.83
CDX85565 Canola plasma membrane 31.13 41.71
CDX88341 Canola plasma membrane 47.42 40.56
CDX87543 Canola plasma membrane 47.42 40.56
CDY63766 Canola golgi, plasma membrane 24.33 39.73
CDY67254 Canola golgi, plasma membrane, vacuole 28.04 39.08
CDX70699 Canola golgi, plasma membrane, vacuole 28.04 39.08
CDX69445 Canola golgi, plasma membrane, vacuole 28.04 39.08
CDX69551 Canola endoplasmic reticulum, extracellular, vacuole 16.29 35.27
CDY66594 Canola plasma membrane 32.16 34.74
CDX78697 Canola plasma membrane 28.04 34.52
HORVU7Hr1G038700.9 Barley nucleus, plastid 26.19 18.27
CDX85566 Canola cytosol 3.51 6.16
Protein Annotations
MapMan:11.2.4.1.1MapMan:24.2.5.2.1GO:A0A078BVX9InterPro:Auxin_eff_plantEnsemblPlants:CDX68327ProteinID:CDX68327
ProteinID:CDX68327.1GO:GO:0005575GO:GO:0006810GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009719GO:GO:0009734GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00099626001InterPro:Mem_transPFAM:PF03547PANTHER:PTHR31752PANTHER:PTHR31752:SF36TIGRFAMs:TIGR00946
TMHMM:TMhelixUniParc:UPI0004EEF8B4SEG:seg:::
Description
BnaA07g23670D
Coordinates
chrLK031787:-:5040415..5043855
Molecular Weight (calculated)
52620.2 Da
IEP (calculated)
8.818
GRAVY (calculated)
0.237
Length
485 amino acids
Sequence
(BLAST)
001: MISWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLL VVLQCIIWYT LLLFLFEFRG AKMLIMEQFP
101: ETAASIVSFK VESDVVSLDG HDFLETDAEI GNDGKLHVTV RKSNASRRSF CGPNMTPRPS NLTGAEIYSL STTPRGSNFN QSDFYSMMGF PGGRGGGGSK
201: ELHMFVWSSN GSPVSDRAGL NAPDSGSNNE QGGRSDQGAK EIRMLVPDQS QNSENKALAR PASGDFGGEP VSITRREEGE RAKDAENGLN KPITNALLQS
301: KTGLGAAAEG EASQGKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWHV AMPKIIQQSI SILSDAGLGM AMFSLGLFMA LQPKLIACGN
401: SVATFAMAVR FLTGPAVMAV ASIAIGLRGD LLRVAIVQAA LPQGIVPFVF AKEYNVHPAI LSTGVIFGML IALPITLVYY ILLGL
Best Arabidopsis Sequence Match ( AT1G23080.1 )
(BLAST)
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.