Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63766 | Canola | golgi, plasma membrane | 80.11 | 97.64 |
| CDX69551 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.66 | 83.48 |
| AT5G15100.1 | Thale cress | plasma membrane | 77.9 | 76.84 |
| CDY66594 | Canola | plasma membrane | 85.08 | 68.6 |
| PGSC0003DMT400003569 | Potato | plasma membrane | 40.61 | 56.54 |
| VIT_14s0108g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 55.25 | 56.02 |
| Solyc02g087660.2.1 | Tomato | plasma membrane | 54.7 | 55.46 |
| Bra023503.1-P | Field mustard | golgi, plasma membrane | 88.67 | 53.77 |
| TraesCS3A01G243700.1 | Wheat | plasma membrane | 51.66 | 52.38 |
| HORVU3Hr1G067670.3 | Barley | plasma membrane | 51.1 | 51.82 |
| EES03524 | Sorghum | plasma membrane | 51.66 | 51.66 |
| TraesCS3D01G247700.1 | Wheat | plasma membrane | 50.83 | 51.54 |
| TraesCS3B01G276500.1 | Wheat | plasma membrane | 50.83 | 51.54 |
| KRH40132 | Soybean | plasma membrane | 50.83 | 51.4 |
| Zm00001d043660_P001 | Maize | plasma membrane | 50.55 | 50.55 |
| KRH01128 | Soybean | plasma membrane | 49.72 | 50.14 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 50.0 | 50.0 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 49.45 | 49.31 |
| Os01t0715600-00 | Rice | peroxisome, plasma membrane, plastid | 50.83 | 38.17 |
| CDX70699 | Canola | golgi, plasma membrane, vacuole | 35.64 | 37.07 |
| CDX69445 | Canola | golgi, plasma membrane, vacuole | 35.08 | 36.49 |
| CDY67254 | Canola | golgi, plasma membrane, vacuole | 35.08 | 36.49 |
| CDX78697 | Canola | plasma membrane | 36.19 | 33.25 |
| CDX82059 | Canola | golgi, plasma membrane | 46.13 | 31.75 |
| CDY63826 | Canola | plasma membrane | 48.62 | 31.26 |
| CDY25767 | Canola | plasma membrane | 49.45 | 31.24 |
| CDX96484 | Canola | plasma membrane | 46.13 | 31.21 |
| CDY40380 | Canola | plasma membrane | 48.34 | 31.14 |
| CDX68327 | Canola | plasma membrane | 41.71 | 31.13 |
| CDX96288 | Canola | golgi, plasma membrane | 50.0 | 31.05 |
| CDY68262 | Canola | plasma membrane | 50.0 | 30.99 |
| CDY12491 | Canola | plasma membrane | 48.9 | 30.84 |
| CDY23471 | Canola | golgi, plasma membrane | 41.99 | 30.83 |
| CDX91695 | Canola | plasma membrane | 48.07 | 30.47 |
| CDY41467 | Canola | plasma membrane | 47.79 | 29.62 |
| CDY47745 | Canola | golgi, plasma membrane | 45.86 | 28.92 |
| CDY38263 | Canola | plasma membrane | 45.58 | 28.55 |
| CDX88341 | Canola | plasma membrane | 43.65 | 27.87 |
| CDX87543 | Canola | plasma membrane | 43.65 | 27.87 |
| CDY53978 | Canola | plasma membrane | 45.3 | 27.52 |
| CDY09501 | Canola | plasma membrane | 42.27 | 27.13 |
| CDY11886 | Canola | plasma membrane | 46.13 | 26.98 |
| CDX88606 | Canola | plasma membrane | 46.13 | 25.97 |
| CDY20694 | Canola | plasma membrane | 44.75 | 25.51 |
| CDY69709 | Canola | plasma membrane | 40.88 | 24.42 |
| CDY72296 | Canola | golgi, plasma membrane | 24.59 | 19.65 |
| CDX85566 | Canola | cytosol | 3.87 | 5.07 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | GO:A0A078D8S2 | InterPro:Auxin_eff_plant | EnsemblPlants:CDX85565 | ProteinID:CDX85565 |
| ProteinID:CDX85565.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00143285001 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF10 | TIGRFAMs:TIGR00946 |
| TMHMM:TMhelix | UniParc:UPI0004EEB382 | SEG:seg | : | : | : |
Description
BnaA02g02480D
Coordinates
chrLK031842:+:682443..685097
Molecular Weight (calculated)
40049.1 Da
IEP (calculated)
8.313
GRAVY (calculated)
0.723
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSWLDVYNV FSATVPLYVS MILGYLSTKH LNLFSLEQCV GINKFIAKFS IPLLSFQVIS QNNPFTMSLR LILSDILQKI LAAVVLAVVI RFWHPKGGTG
101: GKLGWIITGL SVTVFPNTLI IGIPILSAID GDAAKNILVQ IVVLQCLIWS NILLFLFEIN ATWDLQSSGA SIEHRVNDNE ETDIEQEPIE EEAIVRTRSS
201: GTGKIILKAW RKFIVNPNTY AAMIGLIWAT LHFRLGWKLP EMIDKSIHLI SDGGLGMAMF SLGLFMASQS SIIACGTKMS IITMILKFIL GPALMIASAF
301: CIRLRGTLFR VTILQATLPQ GIVPFVFAKE YNVNPEIVST GVIFGMLVFV PITLAYYFVL DL
101: GKLGWIITGL SVTVFPNTLI IGIPILSAID GDAAKNILVQ IVVLQCLIWS NILLFLFEIN ATWDLQSSGA SIEHRVNDNE ETDIEQEPIE EEAIVRTRSS
201: GTGKIILKAW RKFIVNPNTY AAMIGLIWAT LHFRLGWKLP EMIDKSIHLI SDGGLGMAMF SLGLFMASQS SIIACGTKMS IITMILKFIL GPALMIASAF
301: CIRLRGTLFR VTILQATLPQ GIVPFVFAKE YNVNPEIVST GVIFGMLVFV PITLAYYFVL DL
001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
Arabidopsis Description
PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.