Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 98.07 | 98.34 |
| KRH01128 | Soybean | plasma membrane | 71.9 | 72.7 |
| KRH40132 | Soybean | plasma membrane | 70.52 | 71.51 |
| VIT_14s0108g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 61.43 | 62.47 |
| Solyc02g087660.2.1 | Tomato | plasma membrane | 60.33 | 61.34 |
| PGSC0003DMT400003569 | Potato | plasma membrane | 42.7 | 59.62 |
| TraesCS3D01G247700.1 | Wheat | plasma membrane | 53.99 | 54.9 |
| TraesCS3B01G276500.1 | Wheat | plasma membrane | 53.99 | 54.9 |
| KRH18110 | Soybean | extracellular | 19.01 | 54.76 |
| AT5G15100.1 | Thale cress | plasma membrane | 54.82 | 54.22 |
| EES03524 | Sorghum | plasma membrane | 53.99 | 54.14 |
| HORVU3Hr1G067670.3 | Barley | plasma membrane | 53.17 | 54.06 |
| TraesCS3A01G243700.1 | Wheat | plasma membrane | 52.89 | 53.78 |
| Zm00001d043660_P001 | Maize | plasma membrane | 52.89 | 53.04 |
| Bra008722.1-P | Field mustard | golgi, plasma membrane, vacuole | 49.31 | 52.49 |
| CDX69551 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.23 | 52.23 |
| CDX85565 | Canola | plasma membrane | 49.31 | 49.45 |
| CDY63766 | Canola | golgi, plasma membrane | 39.12 | 47.81 |
| CDY66594 | Canola | plasma membrane | 53.17 | 42.98 |
| Os01t0715600-00 | Rice | peroxisome, plasma membrane, plastid | 52.07 | 39.21 |
| KRH37366 | Soybean | plasma membrane | 44.9 | 36.79 |
| KRH00905 | Soybean | golgi, plasma membrane, vacuole | 36.64 | 36.04 |
| KRH40330 | Soybean | golgi, plasma membrane, vacuole | 36.64 | 35.28 |
| KRH37897 | Soybean | plasma membrane | 46.56 | 34.7 |
| KRH12968 | Soybean | plasma membrane | 46.56 | 34.35 |
| KRH66749 | Soybean | plasma membrane | 54.82 | 33.33 |
| KRH15941 | Soybean | plasma membrane | 48.21 | 32.96 |
| KRH48642 | Soybean | plasma membrane | 53.17 | 31.9 |
| KRH49577 | Soybean | plasma membrane | 48.76 | 31.83 |
| KRH41847 | Soybean | golgi, plasma membrane | 52.62 | 31.68 |
| KRH38202 | Soybean | plasma membrane | 52.34 | 29.97 |
| KRH02749 | Soybean | plasma membrane | 50.14 | 28.57 |
| KRH19119 | Soybean | endoplasmic reticulum | 49.86 | 28.19 |
| KRG89296 | Soybean | plasma membrane | 51.52 | 28.08 |
| KRH50369 | Soybean | plasma membrane | 50.96 | 27.82 |
| Bra023503.1-P | Field mustard | golgi, plasma membrane | 44.35 | 26.97 |
| KRG95082 | Soybean | plasma membrane | 34.71 | 26.2 |
| KRH18109 | Soybean | plasma membrane | 24.79 | 25.71 |
| KRH39071 | Soybean | plasma membrane | 27.27 | 23.57 |
| KRH12361 | Soybean | endoplasmic reticulum, golgi | 28.37 | 21.96 |
Protein Annotations
| EntrezGene:100789817 | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EMBL:ACUP02010405 | InterPro:Auxin_eff_plant | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_17G157300 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009926 | GO:GO:0009987 | GO:GO:0010252 |
| GO:GO:0010315 | GO:GO:0010329 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | UniProt:K7MLV7 |
| EnsemblPlants:KRH04363 | ProteinID:KRH04363 | ProteinID:KRH04363.1 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 |
| PANTHER:PTHR31752:SF10 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI000233F3B7 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:-:13404524..13407259
Molecular Weight (calculated)
40194.5 Da
IEP (calculated)
9.161
GRAVY (calculated)
0.630
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLADVYHV VTATVPLYVT MFLAYISVKW WKLFNPEQCS GINKFVANFS VPILSFQVIS SNNIYKMSLK LVYADVVQKL LAFLVFTAII RIKGRGGLKW
101: IITGLSLSTL PNTLILGIPL MKAMYRDEAS LLLPQIIFLQ SMVWYNLLLF LHELDAAIPA RTMPVVAPPS QDTGESETSL EIQSKEEEEE EAEHRTQSKT
201: RMLLILMKVG NKLIINPNTY ATFIGLIWAS IHFRWGVDMP DVVNQSIEIL ASGGLGMATF SLGLFMASNN RVIVCGPRMT LVAMGLKFLV GPAIMAVASI
301: VIGLRDRMLK VAIIQAALPQ GIVPFVFARE YNVNPGILST GVLLGMLMAL PVALTYYLLL SLY
101: IITGLSLSTL PNTLILGIPL MKAMYRDEAS LLLPQIIFLQ SMVWYNLLLF LHELDAAIPA RTMPVVAPPS QDTGESETSL EIQSKEEEEE EAEHRTQSKT
201: RMLLILMKVG NKLIINPNTY ATFIGLIWAS IHFRWGVDMP DVVNQSIEIL ASGGLGMATF SLGLFMASNN RVIVCGPRMT LVAMGLKFLV GPAIMAVASI
301: VIGLRDRMLK VAIIQAALPQ GIVPFVFARE YNVNPGILST GVLLGMLMAL PVALTYYLLL SLY
001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
Arabidopsis Description
PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.