CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18110	Soybean	extracellular	23.16	97.62
KRH18109	Soybean	plasma membrane	56.69	86.0
VIT_18s0001g15420.t01	Wine grape	plasma membrane	75.71	73.09
Solyc06g059730.1.1	Tomato	plasma membrane	68.17	69.62
PGSC0003DMT400079013	Potato	plasma membrane	69.11	69.51
AT1G77110.1	Thale cress	plasma membrane	69.49	64.74
GSMUA_Achr3P22010_001	Banana	plasma membrane	59.89	62.72
GSMUA_Achr8P08300_001	Banana	plasma membrane	67.23	62.41
CDX87543	Canola	plasma membrane	66.29	62.08
CDX88341	Canola	plasma membrane	66.1	61.9
Bra015694.1-P	Field mustard	plasma membrane	66.29	61.32
KRH37366	Soybean	plasma membrane	44.63	53.5
KRH66749	Soybean	plasma membrane	56.31	50.08
KRH48642	Soybean	plasma membrane	56.12	49.26
KRH58174	Soybean	endoplasmic reticulum, plasma membrane	33.52	49.17
KRH41847	Soybean	golgi, plasma membrane	55.56	48.92
KRH01128	Soybean	plasma membrane	32.96	48.75
KRH40132	Soybean	plasma membrane	32.58	48.32
KRH04363	Soybean	endoplasmic reticulum, plasma membrane	32.96	48.21
KRH38202	Soybean	plasma membrane	56.69	47.48
KRH49577	Soybean	plasma membrane	49.53	47.3
KRH12968	Soybean	plasma membrane	43.69	47.15
KRH37897	Soybean	plasma membrane	42.56	46.41
KRH02749	Soybean	plasma membrane	54.99	45.84
KRH19119	Soybean	endoplasmic reticulum	54.8	45.33
KRG89296	Soybean	plasma membrane	56.31	44.89
KRH50369	Soybean	plasma membrane	56.12	44.81
KRG95082	Soybean	plasma membrane	40.49	44.7
KRH39071	Soybean	plasma membrane	34.27	43.33
KRH00905	Soybean	golgi, plasma membrane, vacuole	29.76	42.82
KRH40330	Soybean	golgi, plasma membrane, vacuole	29.38	41.38
KRH12361	Soybean	endoplasmic reticulum, golgi	30.89	34.97

Protein Annotations

EntrezGene:100800139	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	EMBL:ACUP02008732	InterPro:Auxin_eff_plant	EnsemblPlantsGene:GLYMA_14G120900
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005886	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009719	GO:GO:0009734	GO:GO:0009926	GO:GO:0009987	GO:GO:0010252	GO:GO:0010315
GO:GO:0010329	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:I1MAE5	EMBL:KC344377
EnsemblPlants:KRH15941	ProteinID:KRH15941	ProteinID:KRH15941.1	InterPro:Mem_trans	PFAM:PF03547	PANTHER:PTHR31752
PANTHER:PTHR31752:SF8	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI000233ACB0	SEG:seg	:

Description

hypothetical protein

Coordinates

chr14:+:17400748..17415357

Molecular Weight (calculated)

58123.6 Da

IEP (calculated)

8.748

GRAVY (calculated)

0.366

Length

531 amino acids

Sequence
(BLAST)

001: MITGEDLYKV MCAMVPLYFA MLVAYGSVKW CKMFTPDQCS GINRFVAVFA VPVLSFHFIS MNNPYQMDAR FIVADTLSKL VVLLFLSLWA IFFPGGSLDW
101: LITLFSLATL PNTLVMGIPL LQAMYGDFTQ SLMVQLVVLQ CIIWYTLLLF LFEYRAATVL IQRQFPGPTA ASIAKFEVDG DVISLDGHDM PLRTESETDD
201: QGRIRVRIRR SVSSVPETNS SIGGNTAVVT PRPSNLSNAD IFSINTPLHL HDGGGDFAAG ASPHLSGYAS SDAYSLQPTP RASNFNEMEA STPVWGRSPV
301: SAGRGCQQSS PVARVVWGSP GKCLGVERQG CKDIMSDKEI SFRDSTKVSK PADPKDTVAS SQKMPHAFVM MRLILVVVGR KLSRNPNTYS SVLGLLWSLI
401: SFKWNMEMPS LIKASVKIIS DAGLGMAMFS LGLFMALQPR IIACGTKRAV MGMVIRFMCG PLVMSASSIS IGLRQERLHT AIVQAALPQG IVPFVFAREY
501: GLHPDILSTG VIFGMLISLP ITLLYYIFLG L

Best Arabidopsis Sequence Match ( AT1G77110.1 )
(BLAST)

001: MITGNEFYTV MCAMAPLYFA MFVAYGSVKW CKIFTPAQCS GINRFVSVFA VPVLSFHFIS QNNPYKMDTM FILADTLSKI FVFVLLSLWA VFFKAGGLDW
101: LITLFSIATL PNTLVMGIPL LQAMYGDYTQ TLMVQLVVLQ CIIWYTLLLF LFELRAARLL IRAEFPGQAA GSIAKIQVDD DVISLDGMDP LRTETETDVN
201: GRIRLRIRRS VSSVPDSVMS SSLCLTPRAS NLSNAEIFSV NTPNNRFFHG GGGSGTLQFY NGSNEIMFCN GDLGGFGFTR PGLGASPRRL SGYASSDAYS
301: LQPTPRASNF NELDVNGNGT PVWMKSPAAG RIYRQSSPKM MWESGQRHAA KDINGSVPEK EISFRDALKA APQATAAGGG ASMEEGAAGK DTTPVAAIGK
401: QEMPSAIVMM RLILTVVGRK LSRNPNTYSS LLGLVWSLIS FKWNIPMPNI VDFSIKIISD AGLGMAMFSL GLFMALQPKM IPCGAKKATM GMLIRFISGP
501: LFMAGASLLV GLRGSRLHAA IVQAALPQGI VPFVFAREYN LHPDLLSTLV IFGMIVSLPV TILYYVLLGL

Arabidopsis Description

PIN6Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178W8W8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.