Factsheet for GSMUA_Achr3P22010_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18110	Soybean	extracellular	19.92	80.16
GSMUA_Achr8P08300_001	Banana	plasma membrane	78.11	69.23
PGSC0003DMT400079013	Potato	plasma membrane	63.31	60.8
Solyc06g059730.1.1	Tomato	plasma membrane	61.74	60.19
KRH15941	Soybean	plasma membrane	62.72	59.89
VIT_18s0001g15420.t01	Wine grape	plasma membrane	64.5	59.45
GSMUA_Achr9P15520_001	Banana	plasma membrane	46.15	58.94
GSMUA_Achr8P29780_001	Banana	golgi, plasma membrane, vacuole	50.69	53.1
GSMUA_Achr4P00310_001	Banana	golgi, plasma membrane, vacuole	32.15	53.09
AT1G77110.1	Thale cress	plasma membrane	59.57	52.98
CDX88341	Canola	plasma membrane	58.58	52.38
CDX87543	Canola	plasma membrane	58.19	52.03
GSMUA_Achr8P23120_001	Banana	plasma membrane	51.28	51.59
Bra015694.1-P	Field mustard	plasma membrane	58.19	51.39
KRH18109	Soybean	plasma membrane	34.32	49.71
GSMUA_Achr8P09440_001	Banana	plasma membrane	52.86	49.08
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	30.77	48.6
GSMUA_Achr7P07300_001	Banana	golgi, plasma membrane	54.04	48.15
GSMUA_Achr11P...	Banana	golgi, plasma membrane, vacuole	30.57	47.69
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	34.32	47.67
GSMUA_Achr5P25220_001	Banana	golgi, plasma membrane, vacuole	30.57	47.55
GSMUA_Achr5P25210_001	Banana	extracellular, golgi, vacuole	30.37	47.24
GSMUA_Achr1P15720_001	Banana	plasma membrane	47.34	46.78
GSMUA_Achr2P00910_001	Banana	golgi, plasma membrane, vacuole	51.08	46.5
GSMUA_Achr9P27160_001	Banana	plasma membrane	50.3	46.28
GSMUA_Achr7P17140_001	Banana	plasma membrane	52.27	45.53
GSMUA_Achr3P07280_001	Banana	plasma membrane	52.47	45.47
GSMUA_Achr1P25190_001	Banana	golgi, plasma membrane, vacuole	53.06	44.32
GSMUA_Achr5P25200_001	Banana	cytosol, extracellular, plasma membrane	10.26	33.12

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	InterPro:Auxin_eff_plant	GO:GO:0005575	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr3G22010_001	EnsemblPlants:GSMUA_Achr3P22010_001	EnsemblPlants:GSMUA_Achr3T22010_001	UniProt:M0SGR7
InterPro:Mem_trans	PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF8	TIGRFAMs:TIGR00946	TMHMM:TMhelix
UniParc:UPI0002953F7E	SEG:seg	:	:	:	:

Description

Putative Probable auxin efflux carrier component 1b [Source:GMGC_GENE;Acc:GSMUA_Achr3G22010_001]

Coordinates

chr3:+:22912507..22915426

Molecular Weight (calculated)

56234.9 Da

IEP (calculated)

8.357

GRAVY (calculated)

0.472

Length

507 amino acids

Sequence
(BLAST)

001: MITWEDFYTV MCAMVPLYFA MFVAYGSVKW WKIFTPEQCS GINRFVATFA VPVLSFHFIS HNNPYQMDSR FILADTLSKL LVLVILSLWA SLSAACAGPR
101: RRGRRLDWVI TLFSVGTLPN TLVMGIPLLR AMYGDFTQSL MVQLVVLQCI IWYTLLLFLF EYRAATMLIE DQFPGTAAAA IAKFEVDGDI ISLDGRDPIR
201: AESEMEIGTP VWVRSPAAPA GMLIRQQSPA TPGALKLASP LWTLLAIGSR RSQSSLHQFA RIKLHHLRES RSHSPFILLG MGLEAVKETC VTTATVPVLH
301: ITDTRLEGRE KDLSFRSTSK FVVDKEDEEE ELEVEGDQEM PAAFVMLRLI LTVLGRKLSR NPNTYSSILG LLWSLISFKW GVDMPTLVKE SIKIISDAGL
401: GMAMFSLGLF MALQPRIIAC GPKMAAISMA IRFLSGPMVM SVASMVVGLR GVRLHTAIVQ AALPQGIVPF VFAREYGLHP DILSTGVIFG MLVSLPVTLL
501: YYILLGL

Best Arabidopsis Sequence Match ( AT1G73590.1 )
(BLAST)

001: MITAADFYHV MTAMVPLYVA MILAYGSVKW WKIFTPDQCS GINRFVALFA VPLLSFHFIA ANNPYAMNLR FLAADSLQKV IVLSLLFLWC KLSRNGSLDW
101: TITLFSLSTL PNTLVMGIPL LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD IMSLDGRQPL ETEAEIKEDG
201: KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK
301: PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND
401: HQKDVKISVP QGNSNDNQYV EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY SSLFGITWSL ISFKWNIEMP
501: ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST
601: AVIFGMLIAL PITLLYYILL GL

Arabidopsis Description

PIN1Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178WFG7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.