CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15941	Soybean	plasma membrane	86.0	56.69
VIT_18s0001g15420.t01	Wine grape	plasma membrane	72.57	46.18
Solyc06g059730.1.1	Tomato	plasma membrane	67.43	45.38
PGSC0003DMT400079013	Potato	plasma membrane	64.29	42.61
AT1G77110.1	Thale cress	plasma membrane	68.29	41.93
KRH39071	Soybean	plasma membrane	48.86	40.71
CDX87543	Canola	plasma membrane	65.71	40.56
CDX88341	Canola	plasma membrane	65.14	40.21
Bra015694.1-P	Field mustard	plasma membrane	65.71	40.07
GSMUA_Achr8P08300_001	Banana	plasma membrane	60.29	36.89
GSMUA_Achr3P22010_001	Banana	plasma membrane	49.71	34.32
KRH37366	Soybean	plasma membrane	38.29	30.25
KRH66749	Soybean	plasma membrane	51.14	29.98
KRH49577	Soybean	plasma membrane	45.43	28.6
KRH48642	Soybean	plasma membrane	49.43	28.59
KRH41847	Soybean	golgi, plasma membrane	48.57	28.19
KRH38202	Soybean	plasma membrane	50.86	28.08
KRH50369	Soybean	plasma membrane	51.43	27.07
KRG89296	Soybean	plasma membrane	51.43	27.03
KRH02749	Soybean	plasma membrane	48.86	26.84
KRH19119	Soybean	endoplasmic reticulum	48.57	26.48
KRH12968	Soybean	plasma membrane	36.57	26.02
KRH01128	Soybean	plasma membrane	26.57	25.91
KRH37897	Soybean	plasma membrane	36.0	25.87
KRH40132	Soybean	plasma membrane	26.0	25.42
KRH58174	Soybean	endoplasmic reticulum, plasma membrane	26.29	25.41
KRH04363	Soybean	endoplasmic reticulum, plasma membrane	25.71	24.79
KRH00905	Soybean	golgi, plasma membrane, vacuole	22.57	21.41
KRH12361	Soybean	endoplasmic reticulum, golgi	28.57	21.32
KRH40330	Soybean	golgi, plasma membrane, vacuole	22.29	20.69
KRG95082	Soybean	plasma membrane	28.29	20.58
KRH18110	Soybean	extracellular	0.57	1.59

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	EMBL:ACUP02008030	EnsemblPlantsGene:GLYMA_13G038300	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886
GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009926
GO:GO:0009987	GO:GO:0010252	GO:GO:0010315	GO:GO:0010329	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	UniProt:K7LY07	EnsemblPlants:KRH18109	ProteinID:KRH18109	ProteinID:KRH18109.1	InterPro:Mem_trans
PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF8	TMHMM:TMhelix	UniParc:UPI000296B649	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:11846794..11849722

Molecular Weight (calculated)

38213.2 Da

IEP (calculated)

6.384

GRAVY (calculated)

0.247

Length

350 amino acids

Sequence
(BLAST)

001: MITGEDLYKV MCAMVPLYFA MLVAYGSVKW CKMFTPDQCS GINRFVAVFA VPILSFHFIS MNNPYEMDAK FIVADTLSKL AVLLFLSLWA VFFAGGSLDW
101: LITFFSLATL PNTLVMGIPL LQAMYGDFTQ SLMVQLVVLQ CTIWYTLLLF LFEYRAATLL IQRQFPGPTA ASIAKFDVDG DVISLDGHDM PLRTESETDD
201: HGRIHVRIRR SVSSAPETNS SIGGNTTVVT PRQSNLSNAD IFSINTPLHL HEGGGNLAAG ASPHLSGYAS SDAYSLQPTP RASNFNEMEA GTPVWGRSPV
301: AAGRVCRQSS PVARVLWESP GKCLGDKRQG CKDITMSGTC LSDLFISSCV

Best Arabidopsis Sequence Match ( AT1G23080.1 )
(BLAST)

001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL

Arabidopsis Description

PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.