Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37897 | Soybean | plasma membrane | 70.73 | 71.46 |
| KRH18110 | Soybean | extracellular | 15.24 | 59.52 |
| KRH37366 | Soybean | plasma membrane | 52.24 | 58.01 |
| KRH01128 | Soybean | plasma membrane | 35.16 | 48.19 |
| KRH02749 | Soybean | plasma membrane | 62.2 | 48.04 |
| KRH19119 | Soybean | endoplasmic reticulum | 61.99 | 47.51 |
| KRH40132 | Soybean | plasma membrane | 34.35 | 47.21 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 34.35 | 46.56 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 33.94 | 46.13 |
| KRH41847 | Soybean | golgi, plasma membrane | 55.49 | 45.27 |
| KRH48642 | Soybean | plasma membrane | 55.08 | 44.79 |
| KRH66749 | Soybean | plasma membrane | 53.86 | 44.39 |
| KRH15941 | Soybean | plasma membrane | 47.15 | 43.69 |
| KRH40330 | Soybean | golgi, plasma membrane, vacuole | 33.13 | 43.24 |
| KRH00905 | Soybean | golgi, plasma membrane, vacuole | 32.32 | 43.09 |
| KRH49577 | Soybean | plasma membrane | 48.37 | 42.81 |
| KRH38202 | Soybean | plasma membrane | 54.67 | 42.43 |
| KRG89296 | Soybean | plasma membrane | 54.47 | 40.24 |
| KRH39071 | Soybean | plasma membrane | 34.35 | 40.24 |
| KRH12361 | Soybean | endoplasmic reticulum, golgi | 38.21 | 40.09 |
| KRH50369 | Soybean | plasma membrane | 53.46 | 39.55 |
| KRG95082 | Soybean | plasma membrane | 38.62 | 39.5 |
| KRH18109 | Soybean | plasma membrane | 26.02 | 36.57 |
Protein Annotations
| EntrezGene:100781239 | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EMBL:ACUP02009495 | InterPro:Auxin_eff_plant | EnsemblPlantsGene:GLYMA_15G208600 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009926 | GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010315 |
| GO:GO:0010329 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | UniProt:I1MI30 | EMBL:KC344378 |
| EnsemblPlants:KRH12968 | ProteinID:KRH12968 | ProteinID:KRH12968.1 | InterPro:Mem_trans | PFAM:PF03547 | InterPro:PIN2 |
| PANTHER:PTHR31752 | PANTHER:PTHR31752:SF4 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI000233B460 | SEG:seg |
Description
hypothetical protein
Coordinates
chr15:+:30240218..30244559
Molecular Weight (calculated)
54292.7 Da
IEP (calculated)
8.132
GRAVY (calculated)
0.344
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDGVAIYNI VAALVPLYVP MILAYASVLW WKIFTPEQCS GINRLVALYS VPFLNFNFLA FNNPYAMNLR FIAADTLQKV IILGALFLWS AFTKCGNLDW
101: TITLFSLSTL PNTLIVGVPL LTAMYGDSSG SLMSQIFVMQ GVVWFTLMLF LYEYRGAKSL ISNQFPENGG SIASFTVDSD VNSLNGNEPL QADVEMKENG
201: ELHVVVRSHS FNNDSPCNCS TSNHCSEAEI CSMQRSLSFN TTRDLKREGS KEEMSKIDQE KMSRKDACNH LSNGVKHESI DMSPNLKAMG DKEVGIVNVV
301: QYPLSEGLKE EKIEEGDAYK KQQQMPRGSV MTRLVLTMVW RNLIRNPNTY ACVLGLAWSL ISFRWNIKMP SIAKGSILIL SKTGTGMAMF SLGLFMALQP
401: KTIACGKTWT TISMVARFVV GPAVIAVTSI VIGIRGVLLR VAIVQAALPQ AVLSFVFAKE YNLHADIIST AVIFGTVISL PITIIYFVLL GL
101: TITLFSLSTL PNTLIVGVPL LTAMYGDSSG SLMSQIFVMQ GVVWFTLMLF LYEYRGAKSL ISNQFPENGG SIASFTVDSD VNSLNGNEPL QADVEMKENG
201: ELHVVVRSHS FNNDSPCNCS TSNHCSEAEI CSMQRSLSFN TTRDLKREGS KEEMSKIDQE KMSRKDACNH LSNGVKHESI DMSPNLKAMG DKEVGIVNVV
301: QYPLSEGLKE EKIEEGDAYK KQQQMPRGSV MTRLVLTMVW RNLIRNPNTY ACVLGLAWSL ISFRWNIKMP SIAKGSILIL SKTGTGMAMF SLGLFMALQP
401: KTIACGKTWT TISMVARFVV GPAVIAVTSI VIGIRGVLLR VAIVQAALPQ AVLSFVFAKE YNLHADIIST AVIFGTVISL PITIIYFVLL GL
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.