CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
golgi 5
plasma membrane 6
endoplasmic reticulum 4
vacuole 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG93519
KRG96023
KRH18485
KRH19897
KRH21098
KRH32507
KRH59216
KRH67730

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73590.1	KRH21098	AT2G34650.1	17889649
AT1G73590.1	KRH59216	AT2G34650.1	17889649
AT1G73590.1	KRG96023	AT2G36910.1	17237354
AT1G73590.1	KRH19897	AT2G36910.1	17237354
AT1G73590.1	KRH32507	AT2G36910.1	17237354
AT1G73590.1	KRH67730	AT2G36910.1	17237354
AT1G73590.1	KRG93519	AT3G28860.1	17237354
AT1G73590.1	KRH18485	AT3G28860.1	17237354

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39071	Soybean	plasma membrane	65.95	95.0
KRH41847	Soybean	golgi, plasma membrane	86.94	87.23
VIT_17s0000g02420.t01	Wine grape	plasma membrane	84.96	86.53
Solyc03g118740.2.1	Tomato	golgi, plasma membrane	81.32	80.52
CDX82059	Canola	golgi, plasma membrane	69.59	80.04
PGSC0003DMT400014752	Potato	golgi, plasma membrane	80.66	79.48
CDX96484	Canola	plasma membrane	69.26	78.32
CDY47745	Canola	golgi, plasma membrane	73.72	77.7
Bra008105.1-P	Field mustard	golgi, plasma membrane	76.69	75.32
AT1G73590.1	Thale cress	plasma membrane	77.02	74.92
Bra015983.1-P	Field mustard	plasma membrane	76.36	74.76
CDY72296	Canola	golgi, plasma membrane	54.05	72.19
KRH66749	Soybean	plasma membrane	70.58	71.52
KRH18110	Soybean	extracellular	14.55	69.84
KRG95082	Soybean	plasma membrane	54.21	68.19
KRH38202	Soybean	plasma membrane	67.44	64.35
KRG89296	Soybean	plasma membrane	67.93	61.71
KRH50369	Soybean	plasma membrane	67.77	61.65
KRH49577	Soybean	plasma membrane	55.87	60.79
KRH02749	Soybean	plasma membrane	63.47	60.28
KRH19119	Soybean	endoplasmic reticulum	62.81	59.19
KRH37366	Soybean	plasma membrane	42.15	57.56
KRH15941	Soybean	plasma membrane	49.26	56.12
KRH12968	Soybean	plasma membrane	44.79	55.08
KRH01128	Soybean	plasma membrane	31.9	53.76
KRH04363	Soybean	endoplasmic reticulum, plasma membrane	31.9	53.17
KRH40132	Soybean	plasma membrane	31.24	52.79
KRH58174	Soybean	endoplasmic reticulum, plasma membrane	31.57	52.76
KRH37897	Soybean	plasma membrane	41.82	51.95
KRH18109	Soybean	plasma membrane	28.59	49.43
KRH12361	Soybean	endoplasmic reticulum, golgi	35.21	45.42
KRH00905	Soybean	golgi, plasma membrane, vacuole	27.11	44.44
KRH40330	Soybean	golgi, plasma membrane, vacuole	26.94	43.24
CDX85566	Canola	cytosol	2.64	5.8

Protein Annotations

EntrezGene:100499637	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	EMBL:ACUP02004258	InterPro:Auxin_eff_plant	EnsemblPlantsGene:GLYMA_07G102500
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005886	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009719	GO:GO:0009734	GO:GO:0009926	GO:GO:0009987	GO:GO:0010252	GO:GO:0010315
GO:GO:0010329	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:I1KJ54	EMBL:KC344366
EnsemblPlants:KRH48642	ProteinID:KRH48642	ProteinID:KRH48642.1	InterPro:Mem_trans	PFAM:PF03547	PANTHER:PTHR31752
PANTHER:PTHR31752:SF14	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI00023C740C	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:9785238..9789350

Molecular Weight (calculated)

66195.3 Da

IEP (calculated)

8.738

GRAVY (calculated)

0.097

Length

605 amino acids

Sequence
(BLAST)

001: MITLTDFYHV MTAMVPLYVA MILAYGSVKW WKIFSPDQCS GINRFVALFA VPLLSFHFIA SNNPYEMNLR FLAADTLQKI IILVLLAVWS NIAKRGCLEW
101: AITLFSLSTL PNTLVMGIPL LKGMYGDFSG SLMVQIVVLQ CIIWYTLMLF LFEFRGARML ISEQFPDTAG SIVSIHVDSD VMSLDGRQPL ETEAEIKEDG
201: KLHVTVRKSN ASRSDIFSRR SQGLSSTTPR PSNLTNAEIY SLQSSRNPTP RGSSFNHTDF YSMMAAGGRN SNFGASDVYG LSASRGPTPR PSNYDEDGGK
301: PKFHYHAGGT GHYPAPNPGM FSPSNGSKSV AAANANANAK RPNGQAQLKP EDGNRDLHMF VWSSSASPVS DVFGAHEYGG HDQKEVKLNV SPGKVENHRD
401: TQEDYLEKDE FSFGNRGMDR EMNQLEGEKV GDGKPKTMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLT WSLVSFKWNV EMPAIIAKSI SILSDAGLGM
501: AMFSLGLFMA LQPRVIACGN STAAFAMAVR FLTGPAVMAA ASVAVGLKGV LLHVAIVQAA LPQGIVPFVF AKEYNVHPDI LSTAVIFGML IALPITLVYY
601: ILLGL

Best Arabidopsis Sequence Match ( AT1G73590.1 )
(BLAST)

001: MITAADFYHV MTAMVPLYVA MILAYGSVKW WKIFTPDQCS GINRFVALFA VPLLSFHFIA ANNPYAMNLR FLAADSLQKV IVLSLLFLWC KLSRNGSLDW
101: TITLFSLSTL PNTLVMGIPL LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD IMSLDGRQPL ETEAEIKEDG
201: KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK
301: PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND
401: HQKDVKISVP QGNSNDNQYV EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY SSLFGITWSL ISFKWNIEMP
501: ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST
601: AVIFGMLIAL PITLLYYILL GL

Arabidopsis Description

PIN1Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178WFG7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.