Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19897 | Soybean | cytosol, peroxisome, plasma membrane | 95.98 | 96.12 |
| KRG96023 | Soybean | cytosol, peroxisome, plasma membrane | 90.77 | 91.04 |
| KRH67730 | Soybean | cytosol, peroxisome, plasma membrane | 90.1 | 90.16 |
| AT2G36910.1 | Thale cress | peroxisome | 83.69 | 87.4 |
| VIT_08s0007g05060.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 86.6 | 85.89 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 84.96 | 85.28 |
| Bra023087.1-P | Field mustard | cytosol, nucleus, plasma membrane | 84.96 | 85.21 |
| Bra017216.1-P | Field mustard | cytosol, nucleus, plasma membrane | 84.66 | 84.98 |
| Solyc09g008240.2.1 | Tomato | peroxisome | 83.02 | 84.86 |
| CDX79704 | Canola | plasma membrane | 84.66 | 84.79 |
| PGSC0003DMT400009924 | Potato | peroxisome | 83.92 | 84.55 |
| TraesCS7A01G284900.1 | Wheat | plasma membrane | 73.72 | 79.45 |
| GSMUA_Achr4P12130_001 | Banana | cytosol | 75.73 | 75.5 |
| GSMUA_Achr4P04430_001 | Banana | cytosol, peroxisome, plasma membrane | 74.68 | 74.02 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 74.98 | 73.61 |
| TraesCS7D01G284100.1 | Wheat | cytosol | 75.2 | 73.45 |
| Os08t0564300-04 | Rice | plasma membrane | 72.82 | 72.77 |
| HORVU7Hr1G063020.3 | Barley | cytosol | 75.13 | 71.51 |
| Zm00001d031871_P001 | Maize | cytosol | 74.91 | 71.05 |
| OQU80682 | Sorghum | plasma membrane | 73.42 | 63.98 |
| KRH18485 | Soybean | endoplasmic reticulum, mitochondrion | 50.26 | 54.04 |
| KRG93519 | Soybean | cytosol, peroxisome, plasma membrane | 49.81 | 53.52 |
| KRH39563 | Soybean | peroxisome | 45.5 | 49.08 |
| KRH45417 | Soybean | plasma membrane | 45.79 | 49.04 |
| KRH74394 | Soybean | plasma membrane | 45.2 | 48.72 |
| KRH17450 | Soybean | plasma membrane | 44.68 | 48.0 |
| KRH05968 | Soybean | plasma membrane | 44.53 | 47.84 |
| KRH11119 | Soybean | plasma membrane | 41.85 | 45.07 |
| KRH02481 | Soybean | plasma membrane | 42.14 | 44.39 |
| KRH19486 | Soybean | cytosol, peroxisome, plasma membrane | 42.0 | 44.27 |
| KRH21125 | Soybean | plasma membrane | 41.25 | 43.93 |
| KRH69152 | Soybean | cytosol, peroxisome, plasma membrane | 41.85 | 43.84 |
| KRH33644 | Soybean | cytosol, peroxisome, plasma membrane | 41.77 | 43.76 |
| KRH68334 | Soybean | cytosol, peroxisome, plasma membrane | 40.51 | 42.4 |
| KRH02482 | Soybean | cytosol, peroxisome, plasma membrane | 39.76 | 40.98 |
| KRH19480 | Soybean | plasma membrane | 36.78 | 40.96 |
| KRH53669 | Soybean | plasma membrane | 37.9 | 40.59 |
| KRH02484 | Soybean | plasma membrane | 37.38 | 39.65 |
| KRH19479 | Soybean | plasma membrane | 37.6 | 38.88 |
| KRG92957 | Soybean | nucleus | 39.91 | 38.31 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 39.76 | 38.17 |
| KRH70512 | Soybean | extracellular | 39.76 | 38.09 |
| KRH01590 | Soybean | mitochondrion | 39.69 | 38.02 |
| KRH06234 | Soybean | peroxisome, plastid | 38.72 | 34.32 |
Protein Annotations
| Gene3D:1.20.1560.10 | EntrezGene:100777382 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EMBL:ACUP02006123 | EnsemblPlantsGene:GLYMA_10G055000 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | UniProt:I1L8X7 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 |
| EnsemblPlants:KRH32507 | ProteinID:KRH32507 | ProteinID:KRH32507.1 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF384 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI000233C498 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:+:5005732..5012941
Molecular Weight (calculated)
147297.0 Da
IEP (calculated)
8.187
GRAVY (calculated)
0.036
Length
1343 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSQNSEEIKT LEQWRWSEMQ GIELVSSSAT VSNSHESNPA LEKKREERVI MEEVSSVAKK EEGVPNGVGG EKKKDGSVAS VGFGELFRFS DGLDYILMAI
0101: GTVGAFVHGC SLPLFLRFFA DLVNSFGSNA NDLDKMTQEV VKYAFYFLVV GAAIWASSWA EISCWMWTGE RQSTRMRIRY LEAALDQDIQ FFDTEVRTSD
0201: VVFAINTDAV MVQDAISEKL GNFIHYMATF VSGFVVGFTA VWQLALVTLA VVPIIAVIGG IHTTTLAKLS SKSQEALSQA GNIVEQTVVQ IRVVLAFVGE
0301: TRALQGYSSA LRIAQKIGYR TGFAKGMGLG ATYFVVFCCY ALLLWYGGYL VRHHYTNGGL AIATMFSVMI GGLALGQSAP SMAAFTKARV AAAKIFRVID
0401: HKPVIDRRSE SGLELESVTG LVELRNVDFS YPSRPEVLIL NNFSLNVPAG KTIALVGSSG SGKSTVVSLI ERFYDPSSGQ VLLDGNDVKS FKLRWLRQQI
0501: GLVSQEPALF ATTIRENILL GRPDANQVEI EEAARVANAH SFIIKLPEGY ETQVGERGLQ LSGGQKQRIA IARAMLKNPA ILLLDEATSA LDSESEKLVQ
0601: EALDRFMIGR TTLVIAHRLS TIRKADLVAV LQQGSVTEIG THDELFAKGE NGVYAKLIRM QEMAHETSMN NARKSSARPS SARNSVSSPI ITRNSSYGRS
0701: PYSRRLSDFS TSDFSLSLDA SHPNYRLEKL AFKDQASSFW RLAKMNSPEW LYALIGSIGS VVCGSLSAFF AYVLSAVLSV YYNPNHRHMI REIEKYCYLL
0801: IGLSSAALLF NTLQHSFWDI VGENLTKRVR EKMLAAVLKN EMAWFDQEEN ESARIAARLS LDANNVRSAI GDRISVIVQN TALMLVACTA GFVLQWRLAL
0901: VLVAVFPVVV AATVLQKMFM TGFSGDLEAA HAKATQLAGE AIANVRTVAA FNSEKKIVGL FTSNLETPLR RCFWKGQISG SGYGIAQFAL YASYALGLWY
1001: ASWLVKHGIS DFSNTIRVFM VLMVSANGAA ETLTLAPDFI KGGRAMRSVF DLLDRITEIE PDDPDATPVP DRLRGEVELK HVDFSYPTRP DMSVFRDLSL
1101: RARAGKTLAL VGPSGCGKSS VIALIQRFYD PTSGRVMIDG KDIRKYNLKS LRRHIAVVPQ EPCLFATSIY ENIAYGHDSA SEAEIIEAAT LANAHKFISS
1201: LPDGYKTFVG ERGVQLSGGQ KQRIAIARAF VRKAELMLLD EATSALDAES ERSVQEALDR ACSGKTTIIV AHRLSTIRNA NLIAVIDDGK VAEQGSHSLL
1301: LKNYPDGIYA RMIQLQRFTN NQVIGMASGS SSSARPKDDE REG
0101: GTVGAFVHGC SLPLFLRFFA DLVNSFGSNA NDLDKMTQEV VKYAFYFLVV GAAIWASSWA EISCWMWTGE RQSTRMRIRY LEAALDQDIQ FFDTEVRTSD
0201: VVFAINTDAV MVQDAISEKL GNFIHYMATF VSGFVVGFTA VWQLALVTLA VVPIIAVIGG IHTTTLAKLS SKSQEALSQA GNIVEQTVVQ IRVVLAFVGE
0301: TRALQGYSSA LRIAQKIGYR TGFAKGMGLG ATYFVVFCCY ALLLWYGGYL VRHHYTNGGL AIATMFSVMI GGLALGQSAP SMAAFTKARV AAAKIFRVID
0401: HKPVIDRRSE SGLELESVTG LVELRNVDFS YPSRPEVLIL NNFSLNVPAG KTIALVGSSG SGKSTVVSLI ERFYDPSSGQ VLLDGNDVKS FKLRWLRQQI
0501: GLVSQEPALF ATTIRENILL GRPDANQVEI EEAARVANAH SFIIKLPEGY ETQVGERGLQ LSGGQKQRIA IARAMLKNPA ILLLDEATSA LDSESEKLVQ
0601: EALDRFMIGR TTLVIAHRLS TIRKADLVAV LQQGSVTEIG THDELFAKGE NGVYAKLIRM QEMAHETSMN NARKSSARPS SARNSVSSPI ITRNSSYGRS
0701: PYSRRLSDFS TSDFSLSLDA SHPNYRLEKL AFKDQASSFW RLAKMNSPEW LYALIGSIGS VVCGSLSAFF AYVLSAVLSV YYNPNHRHMI REIEKYCYLL
0801: IGLSSAALLF NTLQHSFWDI VGENLTKRVR EKMLAAVLKN EMAWFDQEEN ESARIAARLS LDANNVRSAI GDRISVIVQN TALMLVACTA GFVLQWRLAL
0901: VLVAVFPVVV AATVLQKMFM TGFSGDLEAA HAKATQLAGE AIANVRTVAA FNSEKKIVGL FTSNLETPLR RCFWKGQISG SGYGIAQFAL YASYALGLWY
1001: ASWLVKHGIS DFSNTIRVFM VLMVSANGAA ETLTLAPDFI KGGRAMRSVF DLLDRITEIE PDDPDATPVP DRLRGEVELK HVDFSYPTRP DMSVFRDLSL
1101: RARAGKTLAL VGPSGCGKSS VIALIQRFYD PTSGRVMIDG KDIRKYNLKS LRRHIAVVPQ EPCLFATSIY ENIAYGHDSA SEAEIIEAAT LANAHKFISS
1201: LPDGYKTFVG ERGVQLSGGQ KQRIAIARAF VRKAELMLLD EATSALDAES ERSVQEALDR ACSGKTTIIV AHRLSTIRNA NLIAVIDDGK VAEQGSHSLL
1301: LKNYPDGIYA RMIQLQRFTN NQVIGMASGS SSSARPKDDE REG
0001: MDNDGGAPPP PPTLVVEEPK KAEIRGVAFK ELFRFADGLD YVLMGIGSVG AFVHGCSLPL FLRFFADLVN SFGSNSNNVE KMMEEVLKYA LYFLVVGAAI
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA
Arabidopsis Description
ABCB1ABC transporter B family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR72]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.