Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- plasma membrane 2
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc01g087470.2.1 | |
| Solyc03g118740.2.1 | |
| Solyc07g006900.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G36910.1 | Solyc03g118740.2.1 | AT1G73590.1 | 17237354 |
| AT2G36910.1 | Solyc01g087470.2.1 | AT3G21640.1 | 14517332 |
| AT2G36910.1 | Solyc07g006900.1.1 | AT5G57090.1 | 17237354 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009924 | Potato | peroxisome | 98.48 | 97.07 |
| AT2G36910.1 | Thale cress | peroxisome | 83.26 | 85.07 |
| VIT_08s0007g05060.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 86.15 | 83.6 |
| KRG96023 | Soybean | cytosol, peroxisome, plasma membrane | 84.78 | 83.2 |
| KRH67730 | Soybean | cytosol, peroxisome, plasma membrane | 84.86 | 83.08 |
| KRH32507 | Soybean | cytosol, nucleus, plasma membrane | 84.86 | 83.02 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 83.26 | 81.76 |
| Bra023087.1-P | Field mustard | cytosol, nucleus, plasma membrane | 83.26 | 81.7 |
| KRH19897 | Soybean | cytosol, peroxisome, plasma membrane | 83.18 | 81.51 |
| CDX79704 | Canola | plasma membrane | 83.11 | 81.43 |
| Bra017216.1-P | Field mustard | cytosol, nucleus, plasma membrane | 82.65 | 81.17 |
| TraesCS7A01G284900.1 | Wheat | plasma membrane | 74.28 | 78.33 |
| GSMUA_Achr4P12130_001 | Banana | cytosol | 76.18 | 74.31 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 75.95 | 72.95 |
| GSMUA_Achr4P04430_001 | Banana | cytosol, peroxisome, plasma membrane | 75.11 | 72.84 |
| TraesCS7D01G284100.1 | Wheat | cytosol | 76.1 | 72.73 |
| Os08t0564300-04 | Rice | plasma membrane | 73.21 | 71.58 |
| HORVU7Hr1G063020.3 | Barley | cytosol | 75.57 | 70.38 |
| Zm00001d031871_P001 | Maize | cytosol | 75.04 | 69.63 |
| OQU80682 | Sorghum | plasma membrane | 73.82 | 62.95 |
| Solyc02g087870.2.1 | Tomato | plasma membrane | 50.53 | 53.16 |
| Solyc08g076720.2.1 | Tomato | unclear | 47.18 | 49.32 |
| Solyc05g013890.1.1 | Tomato | cytosol, plasma membrane | 33.33 | 45.91 |
| Solyc02g071350.2.1 | Tomato | plastid | 42.09 | 43.78 |
| Solyc07g064120.1.1 | Tomato | plasma membrane | 41.7 | 43.53 |
| Solyc06g009280.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 41.55 | 42.36 |
| Solyc03g093650.2.1 | Tomato | plasma membrane | 39.5 | 42.3 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 40.56 | 42.2 |
| Solyc06g072960.1.1 | Tomato | peroxisome | 32.5 | 41.54 |
| Solyc07g018130.1.1 | Tomato | plasma membrane | 40.26 | 41.49 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 39.65 | 41.38 |
| Solyc11g067300.1.1 | Tomato | plasma membrane | 39.12 | 40.79 |
| Solyc12g098840.1.1 | Tomato | peroxisome | 39.35 | 40.39 |
| Solyc06g009290.2.1 | Tomato | nucleus | 42.31 | 39.71 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 38.2 | 39.07 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| GO:GO:0060919 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | UniProt:K4CQL3 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 |
| PANTHER:PTHR24221:SF119 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | EnsemblPlantsGene:Solyc09g008240.2 | EnsemblPlants:Solyc09g008240.2.1 |
| TMHMM:TMhelix | UniParc:UPI000276BD01 | SEG:seg | : | : | : |
Description
ABC transporter B family member 1 [Source:Projected from Arabidopsis thaliana (AT2G36910) UniProtKB/Swiss-Prot;Acc:Q9ZR72]
Coordinates
chr9:-:1690129..1697213
Molecular Weight (calculated)
143677.0 Da
IEP (calculated)
8.447
GRAVY (calculated)
0.038
Length
1314 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQGVELVVSE DKNSNTPTTT TTTTNSHQFQ ETRMEVKKEE GGDVEKPTSP PPAVGFGELF RFADGLDYAL MIIGSLGAFV HGCSLPLFLR FFADLVNSFG
0101: SYANDVDKMT QEVLKYAFYF LVVGAAIWAS SWAEISCWMW TGERQTTKMR IKYLEAALNQ DIQYFDTEVR TSDVVSAINT DAVVVQDAIS EKLGNFIHYM
0201: ATFLSGFVVG FTAVWQLALV TLAVVPLIAV IGAIYTMTSA KLSSQSQEAL SKAGNTVEQT VVQIRTVLAF VGEAKAMQAY TAALRVSQKI GYKSGFSKGF
0301: GLGATYFTVF CCYALLLWYG GYLVRHHFTN GGLAIATMFA VMIGGLALGQ SAPSMTAFAK ARVAAAKIFR IIDHKPSVDR NAKTGLELDT VSGQLELKNV
0401: EFSYPSRPEI KILNNFNLVV PAGKTIALVG SSGSGKSTVV SLIERFYDPT SGQLMLDGND IKTLKLKWLR QQIGLVSQEP ALFATSIKEN ILLGRPDATQ
0501: IEIEEAARVA NAHSFIIKLP DGFDTQVGER GLQLSGGQKQ RIAIARAMLK NPAILLLDEA TSALDSESEK LVQEALDRFM IGRTTLVIAH RLSTIRKADL
0601: VAVLQQGNVS EIGSHDELMS KGENGMYAKL IKMQEAAHET ALSNARKSSA RPSSARNSVS SPIITRNSSY GRSPYSRRLS DFSTSDFSLS LDAAYSNYRN
0701: EKLAFKDQAS SFGRLAKMNS PEWTYALIGS IGSIICGSLS AFFAYVLSAV LSVYYNPDHA YMSKQIAKYC YLLIGVSSAA LIFNTLQHYY WDVVGENLTK
0801: RVREKMLAAV LKMEMAWFDQ EENDSSRIAA RLSLDANNVR SAIGDRISVI MQNSALMLVA CTAGFVLQWR LALVLIGVFP VVVAATVLQK MFMKGFSGDL
0901: EAAHAKATQL AGEAVANVRT VAAFNSETKI VNLFDASLQT PLRRCFWKGQ IAGSGYGIAQ FLLYASYALG LWYASWLVKH GISDFSKTIR VFMVLMVSAN
1001: GAAETLTLAP DFIKGGRAMR SVFELLDRKT EVEPDDPDAT AAPDRLRGEV EFKHVDFSYP TRPDVSIFRD LNLRARAGKT LALVGPSGCG KSSVIALIER
1101: FYEPSSGRVI IDGKDIRKYN LKSLRRHIAV VPQEPCLFAT TIYENIAYGH ESATEAEITE AATLANAHKF ISALPDGYKT FVGERGVQLS GGQKQRIAIA
1201: RAFLRKAELM LLDEATSALD AESERCVQEA LDRACAGKTT IIVAHRLSTI RNAHVIAVID DGKVAEQGSH SHLLKNYSDG IYARMIQLQR FTHGEAVNMA
1301: TGSTSSSRPK EDLD
0101: SYANDVDKMT QEVLKYAFYF LVVGAAIWAS SWAEISCWMW TGERQTTKMR IKYLEAALNQ DIQYFDTEVR TSDVVSAINT DAVVVQDAIS EKLGNFIHYM
0201: ATFLSGFVVG FTAVWQLALV TLAVVPLIAV IGAIYTMTSA KLSSQSQEAL SKAGNTVEQT VVQIRTVLAF VGEAKAMQAY TAALRVSQKI GYKSGFSKGF
0301: GLGATYFTVF CCYALLLWYG GYLVRHHFTN GGLAIATMFA VMIGGLALGQ SAPSMTAFAK ARVAAAKIFR IIDHKPSVDR NAKTGLELDT VSGQLELKNV
0401: EFSYPSRPEI KILNNFNLVV PAGKTIALVG SSGSGKSTVV SLIERFYDPT SGQLMLDGND IKTLKLKWLR QQIGLVSQEP ALFATSIKEN ILLGRPDATQ
0501: IEIEEAARVA NAHSFIIKLP DGFDTQVGER GLQLSGGQKQ RIAIARAMLK NPAILLLDEA TSALDSESEK LVQEALDRFM IGRTTLVIAH RLSTIRKADL
0601: VAVLQQGNVS EIGSHDELMS KGENGMYAKL IKMQEAAHET ALSNARKSSA RPSSARNSVS SPIITRNSSY GRSPYSRRLS DFSTSDFSLS LDAAYSNYRN
0701: EKLAFKDQAS SFGRLAKMNS PEWTYALIGS IGSIICGSLS AFFAYVLSAV LSVYYNPDHA YMSKQIAKYC YLLIGVSSAA LIFNTLQHYY WDVVGENLTK
0801: RVREKMLAAV LKMEMAWFDQ EENDSSRIAA RLSLDANNVR SAIGDRISVI MQNSALMLVA CTAGFVLQWR LALVLIGVFP VVVAATVLQK MFMKGFSGDL
0901: EAAHAKATQL AGEAVANVRT VAAFNSETKI VNLFDASLQT PLRRCFWKGQ IAGSGYGIAQ FLLYASYALG LWYASWLVKH GISDFSKTIR VFMVLMVSAN
1001: GAAETLTLAP DFIKGGRAMR SVFELLDRKT EVEPDDPDAT AAPDRLRGEV EFKHVDFSYP TRPDVSIFRD LNLRARAGKT LALVGPSGCG KSSVIALIER
1101: FYEPSSGRVI IDGKDIRKYN LKSLRRHIAV VPQEPCLFAT TIYENIAYGH ESATEAEITE AATLANAHKF ISALPDGYKT FVGERGVQLS GGQKQRIAIA
1201: RAFLRKAELM LLDEATSALD AESERCVQEA LDRACAGKTT IIVAHRLSTI RNAHVIAVID DGKVAEQGSH SHLLKNYSDG IYARMIQLQR FTHGEAVNMA
1301: TGSTSSSRPK EDLD
0001: MDNDGGAPPP PPTLVVEEPK KAEIRGVAFK ELFRFADGLD YVLMGIGSVG AFVHGCSLPL FLRFFADLVN SFGSNSNNVE KMMEEVLKYA LYFLVVGAAI
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA
Arabidopsis Description
ABCB1ABC transporter B family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR72]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.