Factsheet for Solyc02g071350.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007960	Potato	plasma membrane	98.02	98.1
Solyc02g071340.1.1	Tomato	plasma membrane	81.16	81.16
VIT_10s0003g02540.t01	Wine grape	plasma membrane	75.22	77.17
TraesCS6B01G145800.1	Wheat	cytosol	14.89	74.31
Bra012621.1-P	Field mustard	plasma membrane	73.16	74.1
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	31.35	72.66
Os01t0695800-01	Rice	plasma membrane	15.04	72.52
AT4G18050.2	Thale cress	plasma membrane	71.1	72.07
KRH21125	Soybean	plasma membrane	71.5	71.61
VIT_10s0003g02570.t01	Wine grape	plasma membrane	70.07	71.43
KRH11119	Soybean	plasma membrane	69.36	70.25
CDY35168	Canola	golgi, peroxisome, plasma membrane	60.17	69.66
VIT_10s0003g02580.t01	Wine grape	plasma membrane	69.2	69.09
AT5G46540.1	Thale cress	golgi	66.43	67.23
Bra017539.1-P	Field mustard	plasma membrane	53.44	65.47
GSMUA_Achr2P20180_001	Banana	plasma membrane	50.2	65.03
Solyc03g005860.2.1	Tomato	plasma membrane	64.61	64.81
HORVU3Hr1G021600.2	Barley	peroxisome, plasma membrane, vacuole	58.35	64.03
TraesCS3A01G117600.3	Wheat	peroxisome, plasma membrane	58.59	63.68
TraesCS6D01G107600.1	Wheat	cytosol, plasma membrane, vacuole	44.73	62.16
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	63.34	62.06
Os05t0548300-01	Rice	plasma membrane	28.58	62.03
TraesCS3B01G136800.1	Wheat	golgi, mitochondrion, peroxisome, plasma membrane, plastid	61.52	61.96
TraesCS3A01G257500.1	Wheat	plasma membrane	61.28	61.58
TraesCS3D01G257500.1	Wheat	plasma membrane	61.2	61.54
TraesCS3B01G290300.2	Wheat	peroxisome	61.36	61.17
KXG33192	Sorghum	cytosol	61.12	60.84
Zm00001d043762_P001	Maize	cytosol	61.28	60.8
HORVU2Hr1G001630.2	Barley	plasma membrane	59.22	59.6
HORVU2Hr1G001530.10	Barley	plasma membrane	59.22	59.6
TraesCS2B01G012300.1	Wheat	plasma membrane	59.22	59.46
KXG35311	Sorghum	plasma membrane	58.99	59.36
TraesCS3D01G257900.1	Wheat	peroxisome	59.22	59.27
TraesCS3D01G258100.1	Wheat	plasma membrane	58.59	59.2
TraesCS2A01G009900.1	Wheat	plasma membrane	58.91	59.14
TraesCS2D01G010500.1	Wheat	plasma membrane	58.91	59.14
TraesCS3A01G258200.1	Wheat	peroxisome	58.27	58.88
TraesCS2B01G012100.3	Wheat	plasma membrane	58.27	58.74
HORVU3Hr1G065320.47	Barley	plasma membrane	59.07	58.6
Os01t0533900-01	Rice	endoplasmic reticulum, vacuole	38.72	58.56
TraesCS2A01G009600.1	Wheat	plasma membrane	58.04	58.5
TraesCS2D01G010400.1	Wheat	plasma membrane	57.96	58.42
HORVU3Hr1G065280.1	Barley	plasma membrane	58.35	58.4
HORVU6Hr1G021320.43	Barley	peroxisome	58.43	58.34
TraesCS3B01G401600.3	Wheat	cytosol, peroxisome, plasma membrane	58.99	58.29
KXG32655	Sorghum	peroxisome	59.54	58.25
TraesCS6B01G145600.1	Wheat	peroxisome	58.27	58.23
TraesCS3D01G362700.1	Wheat	cytosol, peroxisome, plasma membrane	58.91	58.17
TraesCS3A01G369700.1	Wheat	peroxisome	58.91	58.12
Solyc06g009290.2.1	Tomato	nucleus	64.37	58.07
Zm00001d009447_P002	Maize	plasma membrane	58.12	58.07
Os01t0534700-00	Rice	plasma membrane	50.83	58.05
Zm00001d005528_P001	Maize	plasma membrane	55.27	58.02
Os05t0548500-00	Rice	plasma membrane	57.72	57.86
Zm00001d011644_P002	Maize	plasma membrane	58.75	57.74
TraesCS2B01G012200.1	Wheat	golgi	48.93	57.28
Zm00001d009448_P001	Maize	cytosol, peroxisome, plasma membrane	56.93	56.88
Zm00001d044564_P008	Maize	cytosol, peroxisome, plasma membrane	59.54	56.84
Solyc12g098840.1.1	Tomato	peroxisome	57.09	56.33
TraesCS5A01G495900.1	Wheat	plasma membrane	56.45	56.27
TraesCS3A01G258000.1	Wheat	mitochondrion	58.75	55.96
TraesCS1A01G368500.1	Wheat	cytosol, peroxisome, plasma membrane	55.98	55.89
TraesCS1B01G387400.1	Wheat	peroxisome	55.98	55.89
Os01t0695700-00	Rice	plasma membrane	55.98	55.8
TraesCS1D01G374300.1	Wheat	cytosol, peroxisome, plasma membrane	55.98	55.71
HORVU1Hr1G078450.24	Barley	plasma membrane	55.74	55.65
TraesCS3B01G290700.1	Wheat	peroxisome	45.84	55.25
TraesCS3A01G258400.3	Wheat	peroxisome	54.95	55.17
TraesCS3D01G258200.2	Wheat	peroxisome	54.95	55.12
TraesCS3D01G258300.1	Wheat	cytosol, peroxisome, plasma membrane	55.19	55.1
HORVU3Hr1G065240.14	Barley	cytosol	55.82	55.08
TraesCS3B01G291100.3	Wheat	peroxisome	55.11	55.06
TraesCS3B01G291000.1	Wheat	peroxisome	54.63	54.85
EES01319	Sorghum	cytosol	55.11	54.63
Zm00001d043766_P005	Maize	cytosol	54.71	54.07
Solyc11g067300.1.1	Tomato	plasma membrane	53.92	54.05
Os02t0323000-01	Rice	cytosol, peroxisome	17.89	53.43
Solyc08g076720.2.1	Tomato	unclear	44.66	44.87
Solyc02g087870.2.1	Tomato	plasma membrane	43.55	44.04
Solyc09g008240.2.1	Tomato	peroxisome	43.78	42.09
Solyc05g013890.1.1	Tomato	cytosol, plasma membrane	31.59	41.82
Solyc03g093650.2.1	Tomato	plasma membrane	39.67	40.83
Solyc07g018130.1.1	Tomato	plasma membrane	39.91	39.53
Solyc07g064120.1.1	Tomato	plasma membrane	38.95	39.08
Solyc06g072960.1.1	Tomato	peroxisome	31.59	38.81
OQU78384	Sorghum	plasma membrane	57.72	38.65
Solyc04g010310.2.1	Tomato	plasma membrane	35.71	35.1

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	UniProt:K4B8B1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF204	SMART:SM00382
SUPFAM:SSF52540	SUPFAM:SSF90123	EnsemblPlantsGene:Solyc02g071350.2	EnsemblPlants:Solyc02g071350.2.1	TMHMM:TMhelix	UniParc:UPI0002768E01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2:+:40831572..40837938

Molecular Weight (calculated)

137190.0 Da

IEP (calculated)

8.164

GRAVY (calculated)

0.131

Length

1263 amino acids

Sequence
(BLAST)

0001: MEDNNNNGEK KRDEDQKVSF YKLFSFADKF DIALMIIGTI GAIGNGLTQP LMTLIFGQLV NSFGSSNSDE VVHEISKVSI YYVYLAIGAG VASLLQMSCW
0101: MVTGERQATR IRGLYLKTIL RQDIAFFDTE TTTGEVIGRM SGDTILIQDA LGEKVGKFIQ FISTFVGGFI VAFFKGWLLS IVLVSCIPAL VIAGGAMALI
0201: MSKMSSRGQV AYAQAGNVVE QTIGAIRTVS AFTGEKLAID KYDSKLKIAC ASTVQQGLVS GIGLGTVLLI VFSTYGLAVW YGSKLIIERG YNGGDVINVI
0301: MAIMTGGMSL GQTTPSLNAF AAGQAAAYKM FETINRKPLI DTSDTSGVVL ENIKGEIELK DVYFKYPARP DVQIFSGFSL VVPSGKTVAL VGQSGSGKST
0401: VISLLERFYD PEAGEVLIDG VNLKKFQLKW LRQQMGLVSQ EPILFATTIK ENISYGKENA TEDEIKTAIE LANAAKFLDK LPQGLDTMVG EHGTQLSGGQ
0501: KQRLAIARAI LKNPRILLLD EATSALDAES ERIVQEALEK VMANRTTVVV AHRLTTIRNA DLIAVVNAGK LLEKGTHTEL IQDPNGAYSQ LVRMQGGNRE
0601: EENMKNIDLE KVDLTTDFDN NLSRSSSQRL SAMRRSTSQG SSRHSFTLNY TVPGLIGIHE AEIGNENKGK EDKGSSKKRK KVSIRRLAGL NKPELPYLLL
0701: GSLAAIIHGL IFPLFGLLLS TAIKIFFYPP QKLRIESRFW ALMYFGLGVV TLLVVPFQNY LFGVAGGKLI ERIRSLTFKK VVHQEISWFD DPAHSSGAIG
0801: ARLSTDASTV RTLMGDALAL IVQNIATVVA GLVIAFTANW ILALIILLVM PLIGVQGFLQ TKMYKGFSAD AKVMYEEASQ IANDAVGSIR TVASFCAEEK
0901: VMDMYQKKCE GPMKQGVKIG IVSGASLGFG SFILYCTNAF CFYIGSVLIQ HGLASFGQVF KVFFALTLSA VGVTQSTGMA PDANKAKDSI ASIFDILDRK
1001: PEIDSSSDVG TTLAAVRGDI EFKHVSYRYA TRPDVQIFKD LCLTIPSGKT VALVGESGSG KSTVISLIER FYNPESGSIY LDGVEIRQFK ISWLRQQMGL
1101: VSQEPVLFNE TIRDNIAYSR QGHATEEEII EAAKSANAHN FISSLPQGYD TSVGERGIQL SGGQKQRIAI ARAILKDPKI LLLDEATSAL DAESERIVQE
1201: ALDRVMVNRT TVVVAHRLTT IKGADVIAVV KNGVIAEEGR HDALMNIKDG VYASLVALHM TSA

Best Arabidopsis Sequence Match ( AT4G18050.2 )
(BLAST)

0001: MKKEEERKER MEEKSSKKND GGNQKVSFFK LFSFADKTDV VLMTVGTIAA AGNGLTQPFM TLIFGQLINA FGTTDPDHMV REVWKVAVKF IYLAVYSCVV
0101: AFLQVSCWMV TGERQSATIR GLYLKTILRQ DIGYFDTETN TGEVIGRMSG DTILIQDAMG EKVGKFTQLL CTFLGGFAIA FYKGPLLAGV LCSCIPLIVI
0201: AGAAMSLIMS KMAGRGQVAY AEAGNVVEQT VGAIRTVVAF TGEKQATEKY ESKLEIAYKT VVQQGLISGF GLGTMLAVIF CSYGLAVWYG AKLIMEKGYN
0301: GGQVINVIFA VLTGGMSLGQ TSPSLNAFAA GRAAAFKMFE TIKRSPKIDA YDMSGSVLED IRGDIELKDV YFRYPARPDV QIFAGFSLFV PNGKTVALVG
0401: QSGSGKSTVI SLIERFYDPE SGQVLIDNID LKKLQLKWIR SKIGLVSQEP VLFATTIKEN IAYGKEDATD QEIRTAIELA NAAKFIDKLP QGLDTMVGEH
0501: GTQMSGGQKQ RLAIARAILK NPKILLLDEA TSALDAESER IVQDALVNLM SNRTTVVVAH RLTTIRTADV IAVVHQGKIV EKGTHDEMIQ DPEGAYSQLV
0601: RLQEGSKEEA TESERPETSL DVERSGSLRL SSAMRRSVSR NSSSSRHSFS LASNMFFPGV NVNQTDEMED EENNVRHKKV SLKRLAHLNK PEIPVLVLGS
0701: IAAMVHGTVF PIFGLLLSSS INMFYEPAKI LKKDSHFWAL IYIALGLTNF VMIPVQNYFF GIAGGKLIKR IRSMCFDKVV HQEISWFDDT ANSRSLVGDA
0801: LALIVQNIAT VTTGLIIAFT ANWILALIVL ALSPFIVIQG YAQTKFLTGF SADAKAMYEE ASQVANDAVS SIRTVASFCA EEKVMDLYQQ KCDGPKKNGV
0901: RLGLLSGAGF GFSFFFLYCI NCVCFVSGAG LIQIGKATFG EVFKVFFALT IMAIGVSQTS AMAPDSNKAK DSAASIFDIL DSTPKIDSSS DEGTTLQNVN
1001: GDIEFRHVSF RYPMRPDVQI FRDLCLTIPS GKTVALVGES GSGKSTVISM IERFYNPDSG KILIDQVEIQ TFKLSWLRQQ MGLVSQEPIL FNETIRSNIA
1101: YGKTGGATEE EIIAAAKAAN AHNFISSLPQ GYDTSVGERG VQLSGGQKQR IAIARAILKD PKILLLDEAT SALDAESERV VQDALDRVMV NRTTVVVAHR
1201: LTTIKNADVI AVVKNGVIAE KGRHETLMKI SGGAYASLVT LHMSAN

Arabidopsis Description

PGP9P-glycoprotein 9 [Source:TAIR;Acc:AT4G18050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.