Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G257500.1 | Wheat | plasma membrane | 98.89 | 98.97 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 98.89 | 98.11 |
| KXG33192 | Sorghum | cytosol | 85.68 | 84.87 |
| Zm00001d043762_P001 | Maize | cytosol | 85.84 | 84.76 |
| TraesCS2A01G009900.1 | Wheat | plasma membrane | 83.13 | 83.07 |
| TraesCS2A01G009600.1 | Wheat | plasma membrane | 81.07 | 81.32 |
| TraesCS3A01G258200.1 | Wheat | peroxisome | 70.49 | 70.88 |
| TraesCS3A01G258000.1 | Wheat | mitochondrion | 73.35 | 69.53 |
| TraesCS1A01G368500.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.29 | 68.85 |
| TraesCS3A01G258400.3 | Wheat | peroxisome | 68.66 | 68.6 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 62.61 | 63.93 |
| TraesCS3A01G369700.1 | Wheat | peroxisome | 64.92 | 63.75 |
| TraesCS3A01G117600.3 | Wheat | peroxisome, plasma membrane | 57.84 | 62.56 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 48.29 | 62.26 |
| Bra012621.1-P | Field mustard | plasma membrane | 61.42 | 61.91 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 60.46 | 61.34 |
| Solyc02g071350.2.1 | Tomato | plastid | 61.58 | 61.28 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 61.5 | 61.25 |
| KRH11119 | Soybean | plasma membrane | 60.62 | 61.11 |
| KRH21125 | Soybean | plasma membrane | 61.02 | 60.82 |
| AT4G18050.2 | Thale cress | plasma membrane | 60.06 | 60.59 |
| TraesCS5A01G495900.1 | Wheat | plasma membrane | 60.54 | 60.06 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 60.3 | 59.92 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 59.83 | 59.54 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 51.47 | 59.3 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 25.62 | 59.08 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 58.95 | 58.86 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 58.15 | 58.06 |
| TraesCS1A01G081300.1 | Wheat | unclear | 58.55 | 57.68 |
| AT5G46540.1 | Thale cress | golgi | 56.64 | 57.05 |
| Bra017539.1-P | Field mustard | plasma membrane | 44.39 | 54.12 |
| TraesCS2A01G521400.2 | Wheat | cytosol, peroxisome, plasma membrane | 44.23 | 43.92 |
| TraesCS2A01G344300.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.6 | 43.39 |
| TraesCS6A01G264900.3 | Wheat | golgi | 41.69 | 41.39 |
| TraesCS7A01G284900.1 | Wheat | plasma membrane | 40.97 | 41.33 |
| TraesCS4A01G370600.1 | Wheat | plasma membrane | 40.41 | 41.23 |
| TraesCS7A01G303200.1 | Wheat | cytosol | 23.87 | 38.36 |
| TraesCS2A01G323900.1 | Wheat | plasma membrane | 38.27 | 37.99 |
| TraesCS7A01G303100.1 | Wheat | peroxisome | 37.23 | 37.03 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 38.66 | 34.69 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 38.11 | 34.0 |
| TraesCS4A01G006900.1 | Wheat | peroxisome | 38.74 | 32.58 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF204 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G257500 | EnsemblPlants:TraesCS3A01G257500.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3A:-:479129015..479135981
Molecular Weight (calculated)
135715.0 Da
IEP (calculated)
6.616
GRAVY (calculated)
0.113
Length
1257 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAAAKGRDG HGEEKEGGHA KRVSFTGMFR YADRTDQLLM LVGTLAALAN GVSQPLMTVI FGDMIDAFGG ATGDNVLHRV NKAVLNFVYL GIGTAVVSFL
0101: QVACWTITGE RQATRVRSLY LKSVLRQDIS FFDVEMTTGL IVSRMSGDTV LVQDAIGEKV GKFLQLVATF IGGFVVAFVK GWLLSLVMLA CIPPVVIAGG
0201: AVAKVLSTIS SKGQASYSDA ANVVEQTIGA IKTVASFNGE KQAIGDYNKL INKAYKTTVK EGLANGFGMG SVFFIFFSSY GLAIWYGGKL ILTKGYTGGE
0301: VISILFAIMT GAMSLGNATP CMTAFAEGQS AAHRLFTTIK RKPEIDPDDK TGKQLEDIKG DVELRDVYFS YPARPEQLIF DGFSLHVSSG TTMAIVGESG
0401: SGKSTVISLV ERFYDPQAGE VLIDGINIKS LQLDSVRGKI GLVSQEPLLF MTSIKDNITY GKEGATIEEI KRAAELANAA NFIDKLPNGY DTMVGQRGAQ
0501: LSGGQKQRIA IARAIIKNPK ILLLDEATSA LDVESERIVQ EALNRIMVDR TTLVVAHRLT TVRNADCISV VQQGKIVEQG PHDELVVNPD GAYSQLIRLQ
0601: ENNEEEQKVD HRRLDPRSKS TSLSLKRSIS RGSAGNSSRN SFNLSFGLPG AVELPEGNDT HGENHTEQDG EVPKKAPMGR LALLNKPEVL IILLGSLAAA
0701: VHGVLFPMFG VMISSAIKTF YEPPDKLRKD SSFWGLMCVV LGIISIISIP AELFLFGIAG GKLIERIRAM SFRSIVHQEV AWFDDPKNSS GALGARLSVD
0801: ALNVRRLVGD NLALTVQIIS TLITGFVIAM IADWKLSLII LCVIPLVGLQ GYAQVKFLKG FSQDAKMMYE DASQVATDAI SSIRTVASFC SEKRITRIYD
0901: DKCEASMSQG VRTGIVGGIG FGFSFLMLYL TYGLCFYVGA QFVRHGQSSF GDVFKVFFAL VLATIGVSQT SAMATDSTKA KESAISIFAL LDRKSEIDSS
1001: RNEGLTLDEV KGNIDFQHVS FKYPTRPDIQ IFSDFTLHIP SGKTVALVGE SGSGKSTVIA LLERFYNPDS GTISLDGVEI KSLNINWLRD QTGLVSQEPV
1101: LFNDTIRANI AYGKDGEVTE EELIAAAKAS NAHEFISSLP QGYDTTVGER GIQLSGGQKQ RVAIARAILK DPKILLLDEA TSALDAESER IVQDALDNVM
1201: VGRTTVVVAH RLSTIKGADI IAVLKDGAIV EKGRHEVLMN IKDGVYASLV ELRSASS
0101: QVACWTITGE RQATRVRSLY LKSVLRQDIS FFDVEMTTGL IVSRMSGDTV LVQDAIGEKV GKFLQLVATF IGGFVVAFVK GWLLSLVMLA CIPPVVIAGG
0201: AVAKVLSTIS SKGQASYSDA ANVVEQTIGA IKTVASFNGE KQAIGDYNKL INKAYKTTVK EGLANGFGMG SVFFIFFSSY GLAIWYGGKL ILTKGYTGGE
0301: VISILFAIMT GAMSLGNATP CMTAFAEGQS AAHRLFTTIK RKPEIDPDDK TGKQLEDIKG DVELRDVYFS YPARPEQLIF DGFSLHVSSG TTMAIVGESG
0401: SGKSTVISLV ERFYDPQAGE VLIDGINIKS LQLDSVRGKI GLVSQEPLLF MTSIKDNITY GKEGATIEEI KRAAELANAA NFIDKLPNGY DTMVGQRGAQ
0501: LSGGQKQRIA IARAIIKNPK ILLLDEATSA LDVESERIVQ EALNRIMVDR TTLVVAHRLT TVRNADCISV VQQGKIVEQG PHDELVVNPD GAYSQLIRLQ
0601: ENNEEEQKVD HRRLDPRSKS TSLSLKRSIS RGSAGNSSRN SFNLSFGLPG AVELPEGNDT HGENHTEQDG EVPKKAPMGR LALLNKPEVL IILLGSLAAA
0701: VHGVLFPMFG VMISSAIKTF YEPPDKLRKD SSFWGLMCVV LGIISIISIP AELFLFGIAG GKLIERIRAM SFRSIVHQEV AWFDDPKNSS GALGARLSVD
0801: ALNVRRLVGD NLALTVQIIS TLITGFVIAM IADWKLSLII LCVIPLVGLQ GYAQVKFLKG FSQDAKMMYE DASQVATDAI SSIRTVASFC SEKRITRIYD
0901: DKCEASMSQG VRTGIVGGIG FGFSFLMLYL TYGLCFYVGA QFVRHGQSSF GDVFKVFFAL VLATIGVSQT SAMATDSTKA KESAISIFAL LDRKSEIDSS
1001: RNEGLTLDEV KGNIDFQHVS FKYPTRPDIQ IFSDFTLHIP SGKTVALVGE SGSGKSTVIA LLERFYNPDS GTISLDGVEI KSLNINWLRD QTGLVSQEPV
1101: LFNDTIRANI AYGKDGEVTE EELIAAAKAS NAHEFISSLP QGYDTTVGER GIQLSGGQKQ RVAIARAILK DPKILLLDEA TSALDAESER IVQDALDNVM
1201: VGRTTVVVAH RLSTIKGADI IAVLKDGAIV EKGRHEVLMN IKDGVYASLV ELRSASS
0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
Arabidopsis Description
ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.