Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G250000.1 | Wheat | golgi | 98.26 | 98.65 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 98.1 | 98.34 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 68.96 | 91.32 |
| EES05688 | Sorghum | plasma membrane | 90.76 | 91.19 |
| Zm00001d051514_P002 | Maize | mitochondrion | 89.89 | 90.17 |
| HORVU6Hr1G067200.1 | Barley | plastid | 96.21 | 89.89 |
| Os02t0693700-02 | Rice | plasma membrane | 89.65 | 89.79 |
| VIT_02s0012g01660.t01 | Wine grape | plasma membrane | 74.72 | 76.11 |
| KRH74394 | Soybean | plasma membrane | 74.41 | 75.6 |
| KRH39563 | Soybean | peroxisome | 74.25 | 75.5 |
| AT1G10680.1 | Thale cress | plasma membrane | 71.33 | 73.59 |
| PGSC0003DMT400045176 | Potato | peroxisome | 72.91 | 73.43 |
| CDX94395 | Canola | plasma membrane | 71.41 | 73.26 |
| Solyc08g076720.2.1 | Tomato | unclear | 72.67 | 73.19 |
| Bra013936.1-P | Field mustard | plasma membrane | 71.25 | 73.1 |
| AT4G25960.1 | Thale cress | plasma membrane | 73.22 | 72.82 |
| CDX93393 | Canola | plasma membrane | 70.14 | 72.49 |
| CDY37953 | Canola | plasma membrane | 70.06 | 72.41 |
| Bra019907.1-P | Field mustard | plasma membrane | 69.67 | 72.0 |
| KRH45417 | Soybean | plasma membrane | 71.25 | 71.93 |
| CDX92739 | Canola | plasma membrane | 69.91 | 71.31 |
| Bra019135.1-P | Field mustard | plasma membrane | 69.75 | 71.15 |
| CDX89380 | Canola | plasma membrane | 71.56 | 71.06 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 62.4 | 69.6 |
| TraesCS2A01G344300.1 | Wheat | cytosol, peroxisome, plasma membrane | 50.47 | 50.59 |
| TraesCS2A01G521400.2 | Wheat | cytosol, peroxisome, plasma membrane | 49.92 | 49.92 |
| TraesCS7A01G284900.1 | Wheat | plasma membrane | 47.47 | 48.23 |
| TraesCS4A01G370600.1 | Wheat | plasma membrane | 42.58 | 43.75 |
| TraesCS3A01G258200.1 | Wheat | peroxisome | 42.89 | 43.44 |
| TraesCS3A01G117600.3 | Wheat | peroxisome, plasma membrane | 39.57 | 43.12 |
| TraesCS1A01G081300.1 | Wheat | unclear | 43.29 | 42.95 |
| TraesCS3A01G369700.1 | Wheat | peroxisome | 42.89 | 42.42 |
| GSMUA_Achr4P17010_001 | Banana | peroxisome | 36.89 | 42.26 |
| TraesCS1A01G368500.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.1 | 42.13 |
| TraesCS2A01G009900.1 | Wheat | plasma membrane | 41.79 | 42.05 |
| TraesCS5A01G495900.1 | Wheat | plasma membrane | 41.79 | 41.75 |
| TraesCS2A01G009600.1 | Wheat | plasma membrane | 41.31 | 41.74 |
| TraesCS3A01G257500.1 | Wheat | plasma membrane | 41.39 | 41.69 |
| TraesCS3A01G258400.3 | Wheat | peroxisome | 40.68 | 40.94 |
| TraesCS7A01G303200.1 | Wheat | cytosol | 25.12 | 40.66 |
| TraesCS3A01G258000.1 | Wheat | mitochondrion | 42.5 | 40.57 |
| TraesCS2A01G323900.1 | Wheat | plasma membrane | 38.63 | 38.63 |
| TraesCS7A01G303100.1 | Wheat | peroxisome | 38.15 | 38.21 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 41.79 | 37.76 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 40.76 | 36.62 |
| TraesCS4A01G006900.1 | Wheat | peroxisome | 39.49 | 33.44 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF415 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G264900 | EnsemblPlants:TraesCS6A01G264900.3 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr6A:-:489225869..489232579
Molecular Weight (calculated)
138423.0 Da
IEP (calculated)
9.835
GRAVY (calculated)
0.084
Length
1266 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSSVHGAGQ NQNEAGGGGG DNGRKKAGAE EKVEKVPFMK LFSFADRWDY VLMAVGSVGA CAHGASVPVF FIFFGKLINI IGIASFFPAM VSGRVAKYSL
0101: DFVYLGVVIL FSSWTEVACW MHTGERQAAK MRLAYLRSML DQDIAVFDTE ASTGEVINAI TSDVLVVQDA ISEKVGNFMH YISRFLAGFA IGFSRVWQIS
0201: LVTLAIVPLI AIAGGTYAYV TIGLMARVRK SYVKAGEIAE EVIGNVRTVQ AFVGEEKAVR TYREALLRTY KYGKRGGLAK GLGLGSMHSV LFLSWALLVW
0301: FTGIVVHKRI SNGGESFTTM LNVVIAGLSL GQAAPNISTF LRARTAAYPI FQMIERSTVN KSSSRAGRTL QAVEGNIHFR DVRFAYPSRP DVVILDRLSL
0401: DFPAGKIVAL VGGSGSGKST VVSLIERFYE PLSGAVLLDG HDIRDLDVKW LRGQIGLVNQ EPALFATSIR ENILYGKSDA TADEIDHAAK LSEAITFINN
0501: LPERYETQVG ERGIQLSGGQ KQRIAISRAI LKNPSILLLD EATSALDAES EKSVQEALDR VMVGRTTVVI AHRLSTIRNA DTIAVVDGGR IVETGTHEQL
0601: MANPLSAYSS LIQLQEAAQL QRKPSFSHST SITRPLSFKY SRELSRTSRG GSFRSDKDSI SRYGAGEAND EGQGKGKPVS MKKLYSMVRP DWVFGVSGTL
0701: SAFVAGAQMP LFALGVTQAL VSYYMGWETT KREVRKIATL FCGGAVLTVV FHVIEHLSFG IMGERLTLRV REKMFAAILR NEIGWFDSTT HTSSMLASRL
0801: ETDATLVRTI VVDRSTILLQ NVGMIVTSLI IAFILNWRIT LVVLATYPLM VSGHISEKMF MKGYGGNLGK SYLKANMLAA EAVSNMRTVA AFCAEEKVIK
0901: LYADELKEPG KRSFRRGQGA GVFYGVSQFF LFSSYALALW YGSHLMSKEL ATFRSVMKSF MVLIVTALAM GETLAMAPDI IKGNQMASSV FEILDRKTEV
1001: QIDTGDDIKK VEGVIQLRDV EFRYPSRSEV AVFKGLDLLM KAGKSMALVG MSGSGKSTVL SLILRFYDPI AGKVLVDGKD IKKLKLKSLR RHIGLVQQEP
1101: ALFATTIYEN ILYGKDGATE AEVIEAAKLA NAHTFISSLP EGYQTKVGER GVQLSGGQKQ RIAIARAIVK DPAILLLDEA TSALDVESER VVQQALDRVM
1201: KNRTTVMVAH RLSTIKNADV ISVIQDGKII EQGDHQHLIE NKNGAYHKLV NLQQQQQQQL QGGQSS
0101: DFVYLGVVIL FSSWTEVACW MHTGERQAAK MRLAYLRSML DQDIAVFDTE ASTGEVINAI TSDVLVVQDA ISEKVGNFMH YISRFLAGFA IGFSRVWQIS
0201: LVTLAIVPLI AIAGGTYAYV TIGLMARVRK SYVKAGEIAE EVIGNVRTVQ AFVGEEKAVR TYREALLRTY KYGKRGGLAK GLGLGSMHSV LFLSWALLVW
0301: FTGIVVHKRI SNGGESFTTM LNVVIAGLSL GQAAPNISTF LRARTAAYPI FQMIERSTVN KSSSRAGRTL QAVEGNIHFR DVRFAYPSRP DVVILDRLSL
0401: DFPAGKIVAL VGGSGSGKST VVSLIERFYE PLSGAVLLDG HDIRDLDVKW LRGQIGLVNQ EPALFATSIR ENILYGKSDA TADEIDHAAK LSEAITFINN
0501: LPERYETQVG ERGIQLSGGQ KQRIAISRAI LKNPSILLLD EATSALDAES EKSVQEALDR VMVGRTTVVI AHRLSTIRNA DTIAVVDGGR IVETGTHEQL
0601: MANPLSAYSS LIQLQEAAQL QRKPSFSHST SITRPLSFKY SRELSRTSRG GSFRSDKDSI SRYGAGEAND EGQGKGKPVS MKKLYSMVRP DWVFGVSGTL
0701: SAFVAGAQMP LFALGVTQAL VSYYMGWETT KREVRKIATL FCGGAVLTVV FHVIEHLSFG IMGERLTLRV REKMFAAILR NEIGWFDSTT HTSSMLASRL
0801: ETDATLVRTI VVDRSTILLQ NVGMIVTSLI IAFILNWRIT LVVLATYPLM VSGHISEKMF MKGYGGNLGK SYLKANMLAA EAVSNMRTVA AFCAEEKVIK
0901: LYADELKEPG KRSFRRGQGA GVFYGVSQFF LFSSYALALW YGSHLMSKEL ATFRSVMKSF MVLIVTALAM GETLAMAPDI IKGNQMASSV FEILDRKTEV
1001: QIDTGDDIKK VEGVIQLRDV EFRYPSRSEV AVFKGLDLLM KAGKSMALVG MSGSGKSTVL SLILRFYDPI AGKVLVDGKD IKKLKLKSLR RHIGLVQQEP
1101: ALFATTIYEN ILYGKDGATE AEVIEAAKLA NAHTFISSLP EGYQTKVGER GVQLSGGQKQ RIAIARAIVK DPAILLLDEA TSALDVESER VVQQALDRVM
1201: KNRTTVMVAH RLSTIKNADV ISVIQDGKII EQGDHQHLIE NKNGAYHKLV NLQQQQQQQL QGGQSS
0001: MYISLIFFLS NHFPPLISIP IFIFLSFSSP TNYTHLKLKK MQPSGDPAPE KEKEMTQPKV SLLKLFSFAD FYDCVLMTLG SVGACIHGAS VPIFFIFFGK
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
Arabidopsis Description
ABCB2ABC transporter B family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.