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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: unclear

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:unclear
Any Predictor:cytosol, peroxisome, plasma membrane
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
 unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G082900.2 Wheat cytosol, peroxisome, plasma membrane 98.82 98.82
TraesCS1B01G099000.1 Wheat cytosol, peroxisome, plasma membrane 98.67 98.75
HORVU1Hr1G017460.3 Barley plasma membrane 97.34 96.8
Os05t0137200-01 Rice plasma membrane 27.12 88.04
OQU77362 Sorghum mitochondrion, plasma membrane 77.98 86.22
PGSC0003DMT400011703 Potato cytosol 9.87 75.45
GSMUA_Achr8P29860_001 Banana endoplasmic reticulum 64.81 74.77
GSMUA_Achr1P25070_001 Banana plasma membrane 50.0 70.42
KRH69152 Soybean cytosol, peroxisome, plasma membrane 67.55 67.24
KRH33644 Soybean cytosol, peroxisome, plasma membrane 67.16 66.85
VIT_07s0005g02660.t01 Wine grape cytosol, peroxisome, plasma membrane 67.87 66.77
CDY25095 Canola cytosol 63.09 66.75
CDX67881 Canola cytosol 62.7 66.61
KRH19486 Soybean cytosol, peroxisome, plasma membrane 66.14 66.25
PGSC0003DMT400018820 Potato cytosol, peroxisome, plasma membrane 66.69 66.12
CDY48003 Canola cytosol 61.76 66.11
CDY27510 Canola cytosol 62.07 66.06
CDX80072 Canola cytosol 61.91 65.94
KRH02481 Soybean plasma membrane 65.44 65.49
VIT_05s0020g00890.t01 Wine grape cytosol, peroxisome, plasma membrane 66.14 65.22
KRH68334 Soybean cytosol, peroxisome, plasma membrane 65.36 65.0
CDY51307 Canola cytosol, peroxisome, plasma membrane 64.34 64.95
CDY37776 Canola cytosol, peroxisome, plasma membrane 63.24 64.92
Bra004484.1-P Field mustard cytosol 65.13 64.72
Bra003490.1-P Field mustard cytosol, nucleus, plasma membrane 65.52 64.71
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 65.36 64.7
AT3G62150.2 Thale cress cytosol, nucleus, plasma membrane 65.67 64.66
CDY15432 Canola cytosol 61.99 64.62
CDX89963 Canola cytosol, nucleus, plasma membrane 63.95 64.56
AT2G47000.1 Thale cress cytosol, peroxisome, plasma membrane 64.89 64.39
Bra030503.1-P Field mustard cytosol, peroxisome, plasma membrane 64.26 64.26
Bra040475.1-P Field mustard cytosol 64.66 64.1
CDY15249 Canola cytosol, peroxisome, plasma membrane 63.79 64.09
AT1G02520.1 Thale cress cytosol, peroxisome, plasma membrane 64.03 63.93
PGSC0003DMT400018812 Potato cytosol, peroxisome, plasma membrane 60.34 63.53
Bra033331.1-P Field mustard cytosol, nucleus, plasma membrane 62.93 63.43
CDY24379 Canola plasma membrane 57.99 63.3
AT4G01830.1 Thale cress golgi, plasma membrane, vacuole 60.66 62.93
AT4G01820.1 Thale cress peroxisome, plasma membrane, vacuole 60.42 62.73
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 57.37 62.46
Bra002094.1-P Field mustard cytosol, peroxisome, plasma membrane 60.03 62.23
KRH02482 Soybean cytosol, peroxisome, plasma membrane 62.23 60.94
Bra003445.1-P Field mustard peroxisome 59.72 60.77
Solyc06g009290.2.1 Tomato nucleus 66.46 60.57
CDY58790 Canola peroxisome 58.23 60.36
KRH19480 Soybean plasma membrane 56.43 59.7
CDY51560 Canola peroxisome 58.31 59.47
KRH02484 Soybean plasma membrane 58.23 58.69
TraesCS3A01G257500.1 Wheat plasma membrane 57.68 58.55
Solyc12g098840.1.1 Tomato peroxisome 58.46 58.28
TraesCS3A01G369700.1 Wheat peroxisome 58.31 58.12
TraesCS3A01G117600.3 Wheat peroxisome, plasma membrane 52.9 58.09
PGSC0003DMT400011930 Potato peroxisome 58.46 57.96
KRH19479 Soybean plasma membrane 58.07 57.04
TraesCS2A01G009900.1 Wheat plasma membrane 56.03 56.84
TraesCS3A01G258200.1 Wheat peroxisome 55.49 56.64
TraesCS2A01G009600.1 Wheat plasma membrane 55.49 56.5
Solyc11g067300.1.1 Tomato plasma membrane 54.94 55.63
TraesCS1A01G368500.1 Wheat cytosol, peroxisome, plasma membrane 54.86 55.34
TraesCS5A01G495900.1 Wheat plasma membrane 54.94 55.33
TraesCS3A01G258000.1 Wheat mitochondrion 56.5 54.37
TraesCS3A01G258400.3 Wheat peroxisome 53.6 54.37
PGSC0003DMT400019085 Potato plasma membrane 53.13 52.4
TraesCS2A01G521400.2 Wheat cytosol, peroxisome, plasma membrane 43.57 43.92
TraesCS2A01G344300.1 Wheat cytosol, peroxisome, plasma membrane 43.1 43.55
TraesCS6A01G264900.3 Wheat golgi 42.95 43.29
TraesCS7A01G284900.1 Wheat plasma membrane 41.61 42.62
TraesCS4A01G370600.1 Wheat plasma membrane 39.97 41.4
TraesCS7A01G303200.1 Wheat cytosol 24.14 39.39
TraesCS2A01G323900.1 Wheat plasma membrane 38.09 38.39
TraesCS7A01G303100.1 Wheat peroxisome 36.13 36.47
TraesCS4A01G101600.3 Wheat cytosol, plasma membrane, plastid 38.87 35.2
TraesCS3A01G536300.1 Wheat cytosol, plasma membrane, vacuole 38.4 34.98
TraesCS4A01G006900.1 Wheat peroxisome 38.56 32.91
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439
InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF292SMART:SM00382SUPFAM:SSF52540
SUPFAM:SSF90123TMHMM:TMhelixEnsemblPlantsGene:TraesCS1A01G081300EnsemblPlants:TraesCS1A01G081300.1TIGR:cd03249SEG:seg
Description
No Description!
Coordinates
chr1A:+:64594110..64599841
Molecular Weight (calculated)
136524.0 Da
IEP (calculated)
7.843
GRAVY (calculated)
0.162
Length
1276 amino acids
Sequence
(BLAST)
0001: MSESSRAFNV DGAGQPADGA RGGGKRRPGA GGGGSVPFHR LFAFADGADA ALMLVGAVGA VANGAALPLM TVLFGGLVDA FGGAAGGSGD VLARVSQVSL
0101: EFVYLAIASA VASFAQVTCW MITGERQAAR IRNMYLRTIL RQEIAFFDMY TSTGEVVGRM SGDTVLIQDA MGEKVGKFIQ LMVTFFGGFA VAFAQGWLLT
0201: LVMVATIPPL VLSGAVMSNV VARMASLGQA AYAEAAVVVE QTVGSIRTVA SFTGEKKAVE KYNKSLKCAY SSGVREGLVA AIGMGTVMML LFCGYSLGVW
0301: YGAKLILEKG YTGAQVMNVI FAVLTGSLAL GQASPSMKAF AGGQAAAYKM FETINREPEI DAYSTEGRML DDIQGDIEFR DVHFSYPTRP NEQIFRGFSL
0401: AIQSAKTVAL VGQSGSGKST VISLIERFYD PQLGEVLIDG VNIKELQLKW IRSKIGLVSQ EPALFAASIR DNIAYGKDNA TDQEIRAAAE LANASKFIDK
0501: LPQGFATSVG EHGTQLSGGQ KQRIAIARAI LKDPRILLLD EATSALDTES ERIVQEALDR VMTNRTTVIV AHRLTTVRNA DTIAVICRGS IVEKGPHHDL
0601: LRDPEGAYSQ LIRLQETSHA SEGASNQNKL GRKSDTGIRL GKQSLVNQST SQRSSRDNSS HHSFSVPFGI PHEIDVQVGC SKNITDEIQQ EVPLSRLASL
0701: NKPEVPVLIL GSVASAISGV IFPIFAILLS NVIKAFYEPP EMLKKDAAFW SSMFLIFGAV YFVSLPVGSY FFSVAGCKLI RRIRLMTFEK VVNMEIGWFD
0801: DPHNSSGSIG SRLSSDAAKV RGLVGDTLQL VVQNSATLVA GLVIAFISNW ELSLIILALI PLIGLNGWIQ MKFIQGFSAD AKMMYEEASQ VANDAVSSIR
0901: TVASFSAEEK VMDLYNKKCE GPLQTGIRTG IISGIGFGVS FFLLFGVYAA SFYAGARLVE DKKTTFPKVF RVFLALTMAA IGVSHTSTLT SDSSRARSAV
1001: SSIFAIVDRK SMIDPSDDAG VNLEPLRGDI EFRHVRFRYP TRPDIQIFED LCLTIQSGKT VALVGQSGSG KSTAISLLQR FYDPDAGHIL LDGVDIQKFQ
1101: VRWLRQQMGL VSQEPALFND TIRANIAYGK EGEATESDIV SAAQLANAHK FISSLQQGYG TVVGERGAQL SGGQKQRVAI ARAVAKDPRI LLLDEATSAL
1201: DAESERAVQD ALDRVAASRT TVVVAHRLST VRGADVIAVV KDGAIVERGT HEALIAVKGG AYASLVALHS AAAPSS
Best Arabidopsis Sequence Match ( AT3G62150.3 )
(BLAST)
0001: MDSVIESEEG LKVDSPNRAD AETSNSKIHE EDEKELKTES DLKEEKKKTE KNKQEEDEKT KTVPFHKLFA FADSFDIILM ILGTIGAVGN GLGFPIMTIL
0101: FGDVIDVFGQ NQNSSDVSDK IAKVALKFVY LGLGTLVAAL LQVSGWMISG ERQAGRIRSL YLQTILRQDI AFFDVETNTG EVVGRMSGDT VLIQDAMGEK
0201: VGKAIQLVST FIGGFVIAFT EGWLLTLVMV SSIPLLVMSG AALAIVISKM ASRGQTSYAK AAVVVEQTVG SIRTVASFTG EKQAISNYNK HLVSAYRAGV
0301: FEGASTGLGL GTLNIVIFCT YALAVWYGGK MILEKGYTGG QVLIIIFAVL TGSMSLGQAS PCLSAFAAGQ AAAYKMFEAI KRKPEIDASD TTGKVLDDIR
0401: GDIELNNVNF SYPARPEEQI FRGFSLSISS GSTVALVGQS GSGKSTVVSL IERFYDPQSG EVRIDGINLK EFQLKWIRSK IGLVSQEPVL FTSSIKENIA
0501: YGKENATVEE IRKATELANA SKFIDKLPQG LDTMVGEHGT QLSGGQKQRI AVARAILKDP RILLLDEATS ALDAESERIV QEALDRIMVN RTTVVVAHRL
0601: STVRNADMIA VIHQGKIVEK GSHSELLRDP EGAYSQLIRL QEDTKQTEDS TDEQKLSMES MKRSSLRKSS LSRSLSKRSS SFSMFGFPAG IDTNNEAIPE
0701: KDIKVSTPIK EKKVSFFRVA ALNKPEIPML ILGSIAAVLN GVILPIFGIL ISSVIKAFFK PPEQLKSDTR FWAIIFMLLG VASMVVFPAQ TIFFSIAGCK
0801: LVQRIRSMCF EKVVRMEVGW FDETENSSGA IGARLSADAA TVRGLVGDAL AQTVQNLASV TAGLVIAFVA SWQLAFIVLA MLPLIGLNGY IYMKFMVGFS
0901: ADAKRMYEEA SQVANDAVGS IRTVASFCAE EKVMKMYKKK CEGPMRTGIR QGIVSGIGFG VSFFVLFSSY AASFYAGARL VDDGKTTFDS VFRVFFALTM
1001: AAVAISQSSS LSPDSSKASN AAASIFAVID RESKIDPSDE SGRVLDNVKG DIELRHISFK YPSRPDVQIF QDLCLSIRAG KTIALVGESG SGKSTVIALL
1101: QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDATETE IVSAAELSNA HGFISGLQQG YDTMVGERGV QLSGGQKQRV
1201: AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHETLINIK DGVYASLVQL HLSAST
Arabidopsis Description
ABCB21ABC transporter B family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Q9]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.