CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19480	Soybean	plasma membrane	80.74	87.23
PGSC0003DMT400011703	Potato	cytosol	10.44	81.44
KRH02484	Soybean	plasma membrane	77.13	79.38
KRH19479	Soybean	plasma membrane	77.97	78.21
KRH02481	Soybean	plasma membrane	70.84	72.39
KRH19486	Soybean	cytosol, peroxisome, plasma membrane	70.68	72.29
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	60.09	70.8
Os05t0137200-01	Rice	plasma membrane	21.34	70.74
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	68.0	69.11
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	67.69	68.8
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	67.23	68.28
VIT_05s0020g00890.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.31	67.77
OQU77362	Sorghum	mitochondrion, plasma membrane	58.48	66.03
GSMUA_Achr1P25070_001	Banana	plasma membrane	45.66	65.67
KXG32330	Sorghum	plastid	63.62	64.77
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	63.24	64.48
Solyc12g098840.1.1	Tomato	peroxisome	61.24	62.34
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	61.01	62.3
TraesCS1A01G081300.1	Wheat	unclear	60.94	62.23
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	60.86	62.2
HORVU1Hr1G017460.3	Barley	plasma membrane	61.01	61.96
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	63.01	61.5
PGSC0003DMT400011930	Potato	peroxisome	60.63	61.38
KRH21125	Soybean	plasma membrane	59.4	61.38
KRH11119	Soybean	plasma membrane	57.79	60.38
GSMUA_Achr9P16700_001	Banana	plasma membrane	57.56	59.06
KRH39563	Soybean	peroxisome	41.9	43.86
KRH45417	Soybean	plasma membrane	42.13	43.78
KRH74394	Soybean	plasma membrane	41.6	43.5
KRH18485	Soybean	endoplasmic reticulum, mitochondrion	41.21	42.99
KRG93519	Soybean	cytosol, peroxisome, plasma membrane	41.06	42.8
KRG96023	Soybean	cytosol, peroxisome, plasma membrane	41.21	40.1
KRH05968	Soybean	plasma membrane	38.45	40.08
KRH32507	Soybean	cytosol, nucleus, plasma membrane	40.98	39.76
KRH17450	Soybean	plasma membrane	38.07	39.68
KRH67730	Soybean	cytosol, peroxisome, plasma membrane	40.83	39.64
KRH19897	Soybean	cytosol, peroxisome, plasma membrane	40.52	39.37
KRH53669	Soybean	plasma membrane	36.38	37.8
KRG92957	Soybean	nucleus	36.61	34.1
KRH36206	Soybean	cytosol, golgi, plastid	36.38	33.88
KRH70512	Soybean	extracellular	36.45	33.88
KRH01590	Soybean	mitochondrion	36.15	33.59
KRH06234	Soybean	peroxisome, plastid	38.22	32.87

Protein Annotations

Gene3D:1.20.1560.10	EntrezGene:100777713	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:ACUP02010307	EnsemblPlantsGene:GLYMA_17G041300	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	UniProt:I1MRZ2	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640
EnsemblPlants:KRH02482	ProteinID:KRH02482	ProteinID:KRH02482.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF290	SMART:SM00382
SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI000233F503	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:+:3066546..3073337

Molecular Weight (calculated)

140765.0 Da

IEP (calculated)

6.437

GRAVY (calculated)

0.109

Length

1303 amino acids

Sequence
(BLAST)

0001: MVAEAGLEAD MTSTKTTGST SDHPPAQGPE NTQEIEYMQQ DCKKNKMKGE SNKTVPFYKL FSFADSWDCL LMVVGAISAV GNGISMPLMT ILIGDAIDAF
0101: GGNVDNKQAV VHQVSKASLK FASIGAGAFF AAFLQVACWV ITGERQAARI RGLYLKAILR QDISFFDKDT NSGEVVGRMS GDTVLIQEAM GEKVGKFIQY
0201: VACFFGGTVI AFIKGWLLSL ALLSSLPLLV LSGSVMSFAF AKMASRGQTA YSEAATVVER TIGSIRTVAS FTGEKQAIAQ YNQYLIKAYR VGVQEGVAGG
0301: FGFGLVRLFI YCTYALAVWF GGKMVLEKGY TGGQVISIFF AVLTGSMSLG QASPSLTAFA AGQAAAFKMF ETIKRQPDID AYDTGGRLLD DISGDIELKE
0401: VCFSYPSRPD EQIFNGFSIS IPSGTTAALV GQSGSGKSTV ISLIERFYDP QAGEVLIDGI NLREFQLKWI RQKIGLVSQE PVLFACSIKE NIAYGKDGAT
0501: DEEIRAAAEL ANAAKFIDKF PHGLDTMVGE HGIQLSGGQK QRISIARAIL KDPRILLLDE ATSALDAESE RVVQETLDRI MINRTTVIVA HRLSTIRNAD
0601: VIAVIHHGKV IEKGTHAELT KDPDGAFSQL IRLQKIKRES DQYDANESGK PENFVDSERQ LSQRLSFPQS FSLESSGRGI DSQRSFKISN AMPTSPDLFE
0701: TSEGGPEVLP SAASNKPQEV SLLRIAYLNK PEIPVLLLGT VAAAATGAIL PTVGLLLSHM INTFFEPADE LRKDSKFWAL IFVVLSVAAF IFIPLRSYLF
0801: AVAGSKLIKR IRLMCFEKII QMEIGWFDKA ENSSGALGAR LSTDAASIRT LVGDALGLLV QDISTAITAL VIAFDANWQL SLIVLVLVPL VLLNGNLQMK
0901: SMQGFSTNAK KLYEEASQVA SDAVGNIRTV AAFGAEEKVM ELYQKKCVGP IQTGIRQGLV SGTGFGLSLF FLFSVYACSF YAGARLVESG KTSISDVFRV
1001: FFALSMAAIA MSQSGFMTPA ASKAKSSAAS VFAILDQKSR IDPSDESGMT LEEVNGEIRF HHVTFKYPTR PNVLIFKDLS LNIHAGETIA LVGESGSGKS
1101: SVISLLQRFY DPDSGQITLD GTEIQKLRIK WFRQQMGLVS QEPVLFNDTI RANIAYGKGD DATETEIIAA AELANAHKFI SSLQQGYDTL VGERGIQLSG
1201: GQKQRVAIAR AIVKSPKILL LDEATSALDA ESERVVQDAL DRVRMDRTTI VVAHRLSTIK DADSIAVVEN GVIAEKGKHE TLLNKGGTYA SLVALHISAS
1301: SSS

Best Arabidopsis Sequence Match ( AT2G47000.1 )
(BLAST)

0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS

Arabidopsis Description

ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.