CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	96.02	96.02
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	84.48	84.41
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	80.27	79.34
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	66.3	76.85
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	75.97	75.68
CDY25095	Canola	cytosol	70.98	75.46
CDX67881	Canola	cytosol	70.51	75.27
CDX80072	Canola	cytosol	69.73	74.62
CDY27510	Canola	cytosol	69.42	74.23
Os05t0137200-01	Rice	plasma membrane	22.7	74.05
CDY48003	Canola	cytosol	68.8	73.99
CDX89963	Canola	cytosol, nucleus, plasma membrane	72.78	73.81
KRH19486	Soybean	cytosol, peroxisome, plasma membrane	73.32	73.78
AT1G02520.1	Thale cress	cytosol, peroxisome, plasma membrane	73.4	73.63
CDY51307	Canola	cytosol, peroxisome, plasma membrane	72.54	73.58
Bra004484.1-P	Field mustard	cytosol	73.56	73.44
AT2G47000.1	Thale cress	cytosol, peroxisome, plasma membrane	73.63	73.41
CDY15432	Canola	cytosol	70.05	73.37
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	73.87	73.3
CDY15249	Canola	cytosol, peroxisome, plasma membrane	72.54	73.23
CDY37776	Canola	cytosol, peroxisome, plasma membrane	70.98	73.21
AT3G62150.2	Thale cress	cytosol, nucleus, plasma membrane	73.95	73.15
KRH02481	Soybean	plasma membrane	72.7	73.1
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	73.48	73.08
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.7	73.04
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	71.68	72.59
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	68.56	72.52
Bra040475.1-P	Field mustard	cytosol	72.7	72.42
GSMUA_Achr1P25070_001	Banana	plasma membrane	50.86	71.96
AT4G01820.1	Thale cress	peroxisome, plasma membrane, vacuole	68.8	71.77
AT4G01830.1	Thale cress	golgi, plasma membrane, vacuole	68.41	71.3
OQU77362	Sorghum	mitochondrion, plasma membrane	64.04	71.14
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	69.81	70.03
KXG32330	Sorghum	plastid	69.81	69.92
Solyc06g009290.2.1	Tomato	nucleus	76.13	69.71
CDY24379	Canola	plasma membrane	63.49	69.63
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.85	69.62
CDY20842	Canola	endoplasmic reticulum, golgi, plasma membrane	63.18	69.11
CDY58790	Canola	peroxisome	65.37	68.07
Bra003445.1-P	Field mustard	peroxisome	66.54	68.02
KRH02482	Soybean	cytosol, peroxisome, plasma membrane	69.11	68.0
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	67.39	67.76
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	67.39	67.71
TraesCS1A01G081300.1	Wheat	unclear	67.24	67.55
HORVU1Hr1G017460.3	Barley	plasma membrane	67.16	67.11
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	69.73	66.97
CDY51560	Canola	peroxisome	65.21	66.83
KRH02484	Soybean	plasma membrane	65.83	66.67
KRH19480	Soybean	plasma membrane	62.32	66.25
KRH11119	Soybean	plasma membrane	62.87	64.64
KRH21125	Soybean	plasma membrane	63.26	64.31
KRH19479	Soybean	plasma membrane	65.13	64.28
GSMUA_Achr9P16700_001	Banana	plasma membrane	62.25	62.83
KRH18485	Soybean	endoplasmic reticulum, mitochondrion	43.76	44.92
KRH45417	Soybean	plasma membrane	43.84	44.82
KRG93519	Soybean	cytosol, peroxisome, plasma membrane	43.6	44.72
KRH74394	Soybean	plasma membrane	43.14	44.38
KRH39563	Soybean	peroxisome	43.06	44.34
KRH05968	Soybean	plasma membrane	42.12	43.2
KRH17450	Soybean	plasma membrane	41.81	42.88
KRH32507	Soybean	cytosol, nucleus, plasma membrane	43.84	41.85
KRH67730	Soybean	cytosol, peroxisome, plasma membrane	43.76	41.8
KRG96023	Soybean	cytosol, peroxisome, plasma membrane	43.6	41.75
KRH19897	Soybean	cytosol, peroxisome, plasma membrane	43.53	41.61
KRH53669	Soybean	plasma membrane	37.6	38.44
KRG92957	Soybean	nucleus	39.31	36.03
KRH70512	Soybean	extracellular	39.31	35.95
KRH01590	Soybean	mitochondrion	39.16	35.81
KRH36206	Soybean	cytosol, golgi, plastid	38.92	35.67
KRH06234	Soybean	peroxisome, plastid	38.77	32.81

Protein Annotations

Gene3D:1.20.1560.10	EntrezGene:100800034	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:ACUP02000689	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G008000
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	UniProt:I1JBB1	InterPro:IPR003439	InterPro:IPR011527
InterPro:IPR036640	EnsemblPlants:KRH69152	ProteinID:KRH69152	ProteinID:KRH69152.1	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF290
SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0002337224	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:822822..829313

Molecular Weight (calculated)

138287.0 Da

IEP (calculated)

6.969

GRAVY (calculated)

0.098

Length

1282 amino acids

Sequence
(BLAST)

0001: MDAENGEERK HHEASTSENS AETSTNGEKR EKGKQKEKPE TVPFHKLFAF ADSTDILLMA VGTIGAIGNG LGLPLMTLLF GQMIDSFGSN QQNTHVVEEV
0101: SKVSLKFVYL AVGSGMAAFL QVTSWMVTGE RQAARIRGLY LKTILRQDVA FFDKETNTGE VIGRMSGDTV LIQDAMGEKV GKFLQLIATF IGGFVIAFVR
0201: GWLLTVVMLS TLPLLALSGA TMAVIIGRMA SRGQTAYAKA AHVVEQTIGS IRTVASFTGE KQAVSSYSKF LVDAYKSGVH EGSTAGAGLG TVMLVIFCGY
0301: ALAVWFGAKM IMEKGYNGGT VINVIIAVLT ASMSLGQASP SMSAFAAGQA AAYKMFQTIE RKPEIDAYDP NGKILEDIQG EIELRDVDFS YPARPEELIF
0401: NGFSLHIPSG TTAALVGQSG SGKSTVISLV ERFYDPQAGE VLIDGINLKE FQLRWIRGKI GLVSQEPVLF ASSIKDNIAY GKEGATIEEI RSASELANAA
0501: KFIDKLPQGL DTMVGEHGTQ LSGGQKQRIA IARAILKNPR ILLLDEATSA LDAESERIVQ EALDRIMVNR TTIIVAHRLS TVRNADVIAV IHRGKMVEKG
0601: THIELLKDPE GAYSQLIRLQ EVNKETEGNA DQHNNSELSV ESFRQSSQKR SLQRSISRGS SLGNSSRHSF SVSFGLPTGV NVADPEHESS QPKEEAPEVP
0701: LSRLASLNKP EIPVLVIGSV AAIANGVIFP IFGVLISSVI KTFYEPFDEM KKDSKFWALM FMILGLASFL IIPARGYFFA VAGCKLIQRI RQMCFEKVVN
0801: MEVSWFDEPE NSSGAIGARL SADAASVRAL VGDALGLLVQ NFATVLAGLI IAFVASWQLA LIILVLIPLI GVNGYVQMKF MKGFSADAKM MYEEASQVAN
0901: DAVGSIRTVA SFCAEDKVME LYKNKCEGPM KTGIRQGLIS GSGFGVSFFL LFCVYATSFY AGARLVDAGK ATFSDVFRVF FALTMAAIGV SQSSSFAPDS
1001: SKAKSATASI FGIIDKKSKI DPGDESGSTL DSVKGEIELR HVSFKYPSRP DIQIFRDLSL TIHSGKTVAL VGESGSGKST VIALLQRFYN PDSGQITLDG
1101: IEIRELQLKW LRQQMGLVSQ EPVLFNETIR ANIAYGKGGD ATEAEIIAAA EMANAHKFIS GLQQGYDTIV GERGTQLSGG QKQRVAIARA IIKSPKILLL
1201: DEATSALDAE SERVVQDALD KVMVNRTTVV VAHRLSTIKN ADVIAVVKNG VIVEKGKHEK LINVSGGFYA SLVQLHTSAS TV

Best Arabidopsis Sequence Match ( AT2G47000.1 )
(BLAST)

0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS

Arabidopsis Description

ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.