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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY58790 Canola peroxisome 95.28 96.83
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 84.65 90.36
CDY24379 Canola plasma membrane 82.57 88.37
AT4G01830.1 Thale cress golgi, plasma membrane, vacuole 79.3 80.65
AT4G01820.1 Thale cress peroxisome, plasma membrane, vacuole 78.5 79.9
CDX89963 Canola cytosol, nucleus, plasma membrane 74.74 73.97
CDY51307 Canola cytosol, peroxisome, plasma membrane 74.34 73.58
CDY15249 Canola cytosol, peroxisome, plasma membrane 74.58 73.46
CDY15432 Canola cytosol 71.78 73.37
GSMUA_Achr8P29860_001 Banana endoplasmic reticulum 60.35 68.26
CDX67881 Canola cytosol 65.31 68.03
CDY25095 Canola cytosol 65.47 67.91
CDY27510 Canola cytosol 64.75 67.56
CDX80072 Canola cytosol 64.03 66.86
CDY48003 Canola cytosol 63.47 66.61
CDY37776 Canola cytosol, peroxisome, plasma membrane 65.71 66.13
VIT_07s0005g02660.t01 Wine grape cytosol, peroxisome, plasma membrane 67.95 65.54
KRH69152 Soybean cytosol, peroxisome, plasma membrane 66.83 65.21
PGSC0003DMT400018820 Potato cytosol, peroxisome, plasma membrane 67.07 65.19
Os05t0137200-01 Rice plasma membrane 20.38 64.89
KRH33644 Soybean cytosol, peroxisome, plasma membrane 66.35 64.74
KRH68334 Soybean cytosol, peroxisome, plasma membrane 66.03 64.38
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 64.83 62.92
GSMUA_Achr1P25070_001 Banana plasma membrane 45.4 62.69
OQU77362 Sorghum mitochondrion, plasma membrane 56.67 61.44
PGSC0003DMT400018812 Potato cytosol, peroxisome, plasma membrane 59.31 61.22
Zm00001d008178_P001 Maize cytosol, peroxisome, plasma membrane, plastid 61.71 60.41
KXG32330 Sorghum plastid 61.71 60.31
Solyc06g009290.2.1 Tomato nucleus 66.51 59.43
CDX84897 Canola cytosol 5.52 58.47
TraesCS1A01G081300.1 Wheat unclear 59.47 58.31
TraesCS1B01G099000.1 Wheat cytosol, peroxisome, plasma membrane 59.31 58.2
TraesCS1D01G082900.2 Wheat cytosol, peroxisome, plasma membrane 59.31 58.15
CDY35168 Canola golgi, peroxisome, plasma membrane 50.6 58.02
Zm00001d040562_P002 Maize cytosol, peroxisome, plasma membrane 61.79 57.9
HORVU1Hr1G017460.3 Barley plasma membrane 59.23 57.76
GSMUA_Achr9P16700_001 Banana plasma membrane 57.31 56.46
CDX86437 Canola cytosol 6.63 55.7
CDX86442 Canola cytosol, mitochondrion, plastid 2.88 52.94
CDX93393 Canola plasma membrane 41.89 42.78
CDY37953 Canola plasma membrane 41.73 42.61
CDY00109 Canola plasma membrane 42.21 42.41
CDX94395 Canola plasma membrane 41.57 42.14
CDY20012 Canola plasma membrane 42.05 41.98
CDX86408 Canola plasma membrane 41.41 41.88
CDY65012 Canola plasma membrane 41.89 41.82
CDX92739 Canola plasma membrane 41.33 41.66
CDY27639 Canola plasma membrane 39.73 40.8
CDX89380 Canola plasma membrane 41.57 40.78
CDX86445 Canola plasma membrane 39.33 39.55
CDY04018 Canola plasma membrane 38.85 39.16
CDX85192 Canola plasma membrane 39.49 38.93
CDY42770 Canola golgi, plasma membrane, vacuole 35.17 38.77
CDY46744 Canola cytosol, peroxisome, plasma membrane 40.85 38.19
CDX79704 Canola plasma membrane 40.85 38.11
CDX84896 Canola plasma membrane 31.49 37.49
CDY64952 Canola peroxisome, plasma membrane, vacuole 28.14 35.74
CDY20443 Canola cytosol, mitochondrion, plasma membrane 37.81 33.76
CDY24958 Canola mitochondrion, plasma membrane, plastid 37.49 33.62
CDY53591 Canola cytosol, mitochondrion, plasma membrane 37.73 33.52
CDY07647 Canola cytosol 37.49 33.48
CDY65312 Canola cytosol 37.25 33.31
CDX76106 Canola cytosol, golgi, peroxisome 37.01 33.07
CDY21871 Canola endoplasmic reticulum, plasma membrane 1.44 25.0
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300GO:A0A078IKK5UniProt:A0A078IKK5InterPro:AAA+_ATPase
InterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY51560ProteinID:CDY51560
ProteinID:CDY51560.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00003744001InterPro:IPR003439
InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF292SMART:SM00382SUPFAM:SSF52540
SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0004EE0F53SEG:seg::
Description
BnaCnng20890DBnaCnng20890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKK5]
Coordinates
chrLK033006:+:18873..24920
Molecular Weight (calculated)
135878.0 Da
IEP (calculated)
6.614
GRAVY (calculated)
0.203
Length
1251 amino acids
Sequence
(BLAST)
0001: MVNVSSFETS HVHSRSPTQS EMKKGKIEEK AKTVPFYKLF SFSDVTDVLL MIVGSVGAIG NGLGFPLMTL LFGDLIDTIG QNLFTNDIVE LISKICLKFV
0101: YLGLGTFVAA FLQVSCWVIT GERQAARIRS LYLKTILRQD IVFFDVETNT GEVVGRMSGD TVLILDAMGE KVGKFIQLLA TFLAGYALAF VKGWLLTLVM
0201: LASIPLLAMA GAATSIISTK ASSQQQAAYA KASTIVEQTC GSIRTVASFT REKQAISSYK ELINLAYEST VNQGFSTGLG LGVMFLVFFC SYALAIWFGG
0301: EMILRKGYTG GAVINVMVIV VTINLTSEAR RDLSNVYKRD EPIHLLPIGQ AAPCLTSFAA GQAAAYKMFE TIKRKPVIDC FDQNGKVLED IQGKIELRDV
0401: CFSYPARPRE EVFRGFSLMI SSGTTTALVG ESGSGKSTVI SLIERFYDPN SGQVLIDGVD LKEFQLKWIR GKIGLVSQEP VLFSSSIMEN IGYGKVGATV
0501: QEIEAAAKLA NAAKFIDKLP RGLETMVGEH GTQLSGGQKQ RIAIARAILK DPRILLLDEA TSALDAESER VVQEALDRVM ANRTTVIVAH RLSTVRNADV
0601: IAVLHRGQIV EEGSHLELLK DHEGVYSQLI RLQEINTESK RLEISNGQQD GSIRNGGNSG SRMHGDDDDE SVSALVLLAG QENTEMPKDM PKDVSITRIA
0701: ALNKPEALIL TLGTIVCALD GAIFPIFGLF FAKVIMAFFQ PPHELRSDSR YWSIIFVLLG VLSLVVYPTH MSLFAVAGGR LIRRIRSMCF EKVVHMEVGW
0801: FDELENSSGA IGARLSADAA LIRTLVGDSL ALTIKNVATA VVGIIIAFVI SWELAVIILV PIPLTGINHY VQIKFMKGFS ADAKTKYEEA SQVASDAVGS
0901: IRTVASFCAE EKVIEMYKKR CEDSIKSGMK QGLVAGLGFG LSFFVLYSVY AACFYAGARL VKDGRTTYNG VFEVFLTLTV TTIGISGVSS SAPDSSKAKS
1001: AAASIFRIID RKSKIDTRDE SGMVLENVKG DIDDIYTVAL VGESGSGKST VISLLQRFYD PDSGHITLDG VELKKLQLKW LRQQMGLVGQ EPVLFNDTIR
1101: ANIAYGKGGE EATEAEIVAA SELSNAHKFI SSIQKGYDTV VGERGIQLSG GQKQRVAIAR AIVKEPKILL LDEATSALDA ESERVVQDAL DRVMVNRTTI
1201: VVAHRLSTIK NADIIAVVEN GMIVEKGTHE TLMNIEGGVY ASLVQPHMSA F
Best Arabidopsis Sequence Match ( AT4G01820.1 )
(BLAST)
0001: MEEKTKTVPF YKLFSFSDST DVLLMIVGSI GAIGNGVGFP LMTLLFGDLI DSIGQNQSNK DIVEIVSKVC LKFVYLGLGT LGAAFLQVAC WMITGERQAA
0101: RIRSLYLKTI LRQDIGFFDV ETSTGEVVGR MSGDTVLILE AMGEKVGKFI QLIATFVGGF VLAFVKGWLL TLVMLVSIPL LAIAGAAMPI IVTRASSREQ
0201: AAYAKASTVV EQTLGSIRTV ASFTGEKQAM KSYREFINLA YRASVKQGFS MGLGLGVVFF VFFCSYALAI WFGGEMILKK GYTGGEVVNV MVTVVASSMS
0301: LGQTTPCLTA FAAGKAAAYK MFETIERKPS IDAFDLNGKV LEDIRGEIEL RDVCFSYPAR PMEEVFGGFS LLIPSGATAA LVGESGSGKS SVISLIERFY
0401: DPSSGSVLID GVNLKEFQLK WIRGKIGLVS QEPVLFSSSI MENIGYGKEN ATVEEIQAAA KLANAANFID KLPRGLETLV GEHGTQLSGG QKQRIAIARA
0501: ILKDPRILLL DEATSALDAE SERVVQEALD RVMMSRTTVI VAHRLSTVRN ADMIAVIHRG KIVEEGSHSE LLKDHEGAYA QLIRLQKIKK EPKRLESSNE
0601: LRDRSINRGS SRNIRTRVHD DDSVSVLGLL GRQENTEISR EQSRNVSITR IAALNKPETT ILILGTLLGA VNGTIFPIFG ILFAKVIEAF FKPPHDMKRD
0701: SRFWSMIFVL LGVASLIVYP MHTYLFAVAG GRLIQRIRVM CFEKVVHMEV GWFDDPENSS GTIGSRLSAD AALIKTLVGD SLSLSVKNAA AAVSGLIIAF
0801: TASWKLAVII LVMIPLIGIN GYLQIKFIKG FTADAKAKYE EASQVANDAV GSIRTVASFC AEEKVMEMYK KRCEDTIKSG IKQGLISGVG FGISFFVLYS
0901: VYASCFYVGA RLVKAGRTNF NDVFQVFLAL TMTAIGISQA SSFAPDSSKA KGAAASIFGI IDGKSMIDSR DESGLVLENV KGDIELCHIS FTYQTRPDVQ
1001: IFRDLCFAIR AGQTVALVGE SGSGKSTVIS LLQRFYDPDS GHITLDRVEL KKLQLKWVRQ QMGLVGQEPV LFNDTIRSNI AYGKGGDEAS EAEIIAAAEL
1101: ANAHGFISSI QQGYDTVVGE RGIQLSGGQK QRVAIARAIV KEPKILLLDE ATSALDAESE RVVQDALDRV MVNRTTVVVA HRLSTIKNAD VIAVVKNGVI
1201: VEKGTHETLI NIEGGVYASL VQLHISASS
Arabidopsis Description
ABCB3ABC transporter B family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYI2]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.