Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014756.1-P | Field mustard | cytosol, golgi, peroxisome | 99.43 | 99.43 |
| CDY65312 | Canola | cytosol | 97.5 | 97.57 |
| AT3G55320.1 | Thale cress | cytosol, peroxisome, plasma membrane | 93.79 | 93.25 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 89.21 | 89.53 |
| CDY07647 | Canola | cytosol | 89.29 | 89.22 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 89.21 | 89.15 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 89.5 | 88.99 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 79.07 | 85.15 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 77.79 | 84.75 |
| KRH70512 | Soybean | extracellular | 84.64 | 84.52 |
| KRH01590 | Soybean | mitochondrion | 84.57 | 84.45 |
| KRG92957 | Soybean | nucleus | 84.29 | 84.35 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 84.07 | 84.13 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 6.64 | 83.78 |
| GSMUA_Achr3P17720_001 | Banana | peroxisome | 73.79 | 82.51 |
| KXG34231 | Sorghum | cytosol, plasma membrane, vacuole | 78.5 | 78.44 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 78.14 | 78.09 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 78.07 | 77.68 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 77.93 | 77.38 |
| Zm00001d041947_P001 | Maize | cytosol, peroxisome, plasma membrane | 77.36 | 77.08 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 76.5 | 76.55 |
| Os03t0280000-01 | Rice | plasma membrane | 77.14 | 76.54 |
| EER92449 | Sorghum | plasma membrane | 76.71 | 76.01 |
| Zm00001d047780_P002 | Maize | plasma membrane | 76.71 | 76.01 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 76.21 | 75.73 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 76.21 | 75.73 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 76.0 | 75.51 |
| CDX84897 | Canola | cytosol | 4.0 | 47.46 |
| CDX86437 | Canola | cytosol | 4.71 | 44.3 |
| CDY00109 | Canola | plasma membrane | 37.29 | 41.93 |
| CDY20012 | Canola | plasma membrane | 37.43 | 41.82 |
| CDX86408 | Canola | plasma membrane | 36.86 | 41.71 |
| CDY65012 | Canola | plasma membrane | 37.0 | 41.34 |
| CDX93393 | Canola | plasma membrane | 36.14 | 41.31 |
| CDY37953 | Canola | plasma membrane | 35.93 | 41.06 |
| CDY27639 | Canola | plasma membrane | 35.5 | 40.8 |
| CDX94395 | Canola | plasma membrane | 35.79 | 40.6 |
| CDX92739 | Canola | plasma membrane | 35.93 | 40.53 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 32.36 | 39.91 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 38.0 | 39.76 |
| CDX79704 | Canola | plasma membrane | 38.07 | 39.75 |
| CDX67881 | Canola | cytosol | 33.71 | 39.3 |
| CDX89380 | Canola | plasma membrane | 35.79 | 39.29 |
| CDY25095 | Canola | cytosol | 33.71 | 39.14 |
| CDX80072 | Canola | cytosol | 33.36 | 38.98 |
| CDY27510 | Canola | cytosol | 33.21 | 38.78 |
| CDY48003 | Canola | cytosol | 32.86 | 38.59 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 33.93 | 38.21 |
| CDX84896 | Canola | plasma membrane | 28.5 | 37.96 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 34.21 | 37.9 |
| CDX86445 | Canola | plasma membrane | 33.5 | 37.7 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 29.36 | 37.67 |
| CDY15432 | Canola | cytosol | 32.93 | 37.66 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 33.93 | 37.58 |
| CDY04018 | Canola | plasma membrane | 33.29 | 37.55 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 34.0 | 37.48 |
| CDY58790 | Canola | peroxisome | 32.93 | 37.45 |
| CDY24379 | Canola | plasma membrane | 31.14 | 37.3 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 31.21 | 37.29 |
| CDY51560 | Canola | peroxisome | 33.07 | 37.01 |
| CDX86442 | Canola | cytosol, mitochondrion, plastid | 1.79 | 36.76 |
| CDX85192 | Canola | plasma membrane | 33.29 | 36.72 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 22.5 | 31.98 |
| CDY21871 | Canola | endoplasmic reticulum, plasma membrane | 1.57 | 30.56 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | GO:A0A078CG12 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | EnsemblPlants:CDX76106 | ProteinID:CDX76106 | ProteinID:CDX76106.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00126377001 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24222 |
| PANTHER:PTHR24222:SF21 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0004EE71E2 |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g03700D
Coordinates
chrLK031806:+:880916..887576
Molecular Weight (calculated)
154352.0 Da
IEP (calculated)
5.844
GRAVY (calculated)
0.094
Length
1400 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYPDPSET GGTATAAQAE DDDEMEEEPD EAEPPPAAVP FSQLFACADC FDWVLMILGS VAAAAHGSAL
0101: IVYLHYFAKI VEVLAFSGAR SEDQYDRLVE LSLTIVYIAG GVFVSGWIEV SCWILTGERQ TAVIRSKYVQ VLLNQDMSFF DTYGNNGDIV SQVLSDVLLI
0201: QSALSEKVGN YIHNMATFIS GLVIGFVNCW EIALITLATG PFIVAAGGIS NIFLHRLAEN IQDAYAEAAG IAEQAISYIR TLYAFTNETL AKYSYATSLQ
0301: ATLRFGIMIS LVQGLGLGFT YGLAICSCAL QLWIGRFFVT SGRANGGEIL AALFAVILSG LGLNQAATNF YSFDQGRIAA YRLFEMISPS SSVANQEGAV
0401: LASVQGNIEF RNVYFSYLSR PEIPILSGFY LTVPAKKAVA LVGRNGSGKS SIIPLMERFY DPTLGEVLLD GENIKNLKLE WLRSQIGLVT QEPALLSLSI
0501: RENIAYGRDA TLDQIEEAAK IAHAHTFISS LEKGYETQVG RAGLVMTEEQ KIKLSIARAV LLNPTILLLD EVTGGLDFEA ERIVQEALDL LMLGRSTIII
0601: ARQLSLIKNA DYIAVMEEGQ LVEMGTHDEL INLGGLYAEL LKCEEATKLP RRMPVRNYKE SAVFQIERDS SAGCGVQEPS SPKMIKSPSL QRGNGVFRPQ
0701: DLCFNTEESP NDHNPAAPEK LGENGLPLDD ADKEPTMKRQ DSFEMRLPEL PKIDVHGPQH KSNDSDPESP VSPLLTSDPK NERSHSQTFS RPLSSSDDTK
0801: ANGKDAQHKE SPSFWRLAQL SFPEWLYALL GSVGAAVFGS FNPLLAYVMA LVVTEYYKSK GGHLREQVDK WCLILAAMGI VTVFANFLQH FYFGIMGEKT
0901: TERVRRMMFS AMLRNEVGWF DHEENSPDTL SMRLANDATF VRAAFSNRLS IFIQDSFAVI VALLIGLLLG WRLALVALAT LPILSLSAIA QKLWLSGFSK
1001: GIQEMHRKAS LVLEDAVRNI YTVVAFCAGN KVMELYRMQL QRILRQSFLH GMAIGFAFGF SQFLLFACNA LLLWCTALSV KRGYMKLPTA ITEYMVFSFA
1101: TFALVEPFGL APYILKRRKS LISVFEIIDR VPTIEPDDNS ALKPPNVYGS IELKNIDFCY PSRPEVLVLS NFSLKVNGGQ TLAVVGVSGS GKSTIISLVE
1201: RYYDPVAGQV LLDGRDLKLY NLRWLRSHMG LVQQEPIIFS TTIRDNIIYA RHKASEAEMK EAARIANAHH FISSLPHGYD THVGMRGVEL TPGQKQRIAI
1301: ARVVLKNAPI ILIDEGSSSI ESESSRVVQE ALDTLIMGNK TTILIAHRAA MMRHVDNIVV LNGGRIVEEG MHDALAAKNG LYVRLMLPHF GKGLRQHRLI
0101: IVYLHYFAKI VEVLAFSGAR SEDQYDRLVE LSLTIVYIAG GVFVSGWIEV SCWILTGERQ TAVIRSKYVQ VLLNQDMSFF DTYGNNGDIV SQVLSDVLLI
0201: QSALSEKVGN YIHNMATFIS GLVIGFVNCW EIALITLATG PFIVAAGGIS NIFLHRLAEN IQDAYAEAAG IAEQAISYIR TLYAFTNETL AKYSYATSLQ
0301: ATLRFGIMIS LVQGLGLGFT YGLAICSCAL QLWIGRFFVT SGRANGGEIL AALFAVILSG LGLNQAATNF YSFDQGRIAA YRLFEMISPS SSVANQEGAV
0401: LASVQGNIEF RNVYFSYLSR PEIPILSGFY LTVPAKKAVA LVGRNGSGKS SIIPLMERFY DPTLGEVLLD GENIKNLKLE WLRSQIGLVT QEPALLSLSI
0501: RENIAYGRDA TLDQIEEAAK IAHAHTFISS LEKGYETQVG RAGLVMTEEQ KIKLSIARAV LLNPTILLLD EVTGGLDFEA ERIVQEALDL LMLGRSTIII
0601: ARQLSLIKNA DYIAVMEEGQ LVEMGTHDEL INLGGLYAEL LKCEEATKLP RRMPVRNYKE SAVFQIERDS SAGCGVQEPS SPKMIKSPSL QRGNGVFRPQ
0701: DLCFNTEESP NDHNPAAPEK LGENGLPLDD ADKEPTMKRQ DSFEMRLPEL PKIDVHGPQH KSNDSDPESP VSPLLTSDPK NERSHSQTFS RPLSSSDDTK
0801: ANGKDAQHKE SPSFWRLAQL SFPEWLYALL GSVGAAVFGS FNPLLAYVMA LVVTEYYKSK GGHLREQVDK WCLILAAMGI VTVFANFLQH FYFGIMGEKT
0901: TERVRRMMFS AMLRNEVGWF DHEENSPDTL SMRLANDATF VRAAFSNRLS IFIQDSFAVI VALLIGLLLG WRLALVALAT LPILSLSAIA QKLWLSGFSK
1001: GIQEMHRKAS LVLEDAVRNI YTVVAFCAGN KVMELYRMQL QRILRQSFLH GMAIGFAFGF SQFLLFACNA LLLWCTALSV KRGYMKLPTA ITEYMVFSFA
1101: TFALVEPFGL APYILKRRKS LISVFEIIDR VPTIEPDDNS ALKPPNVYGS IELKNIDFCY PSRPEVLVLS NFSLKVNGGQ TLAVVGVSGS GKSTIISLVE
1201: RYYDPVAGQV LLDGRDLKLY NLRWLRSHMG LVQQEPIIFS TTIRDNIIYA RHKASEAEMK EAARIANAHH FISSLPHGYD THVGMRGVEL TPGQKQRIAI
1301: ARVVLKNAPI ILIDEGSSSI ESESSRVVQE ALDTLIMGNK TTILIAHRAA MMRHVDNIVV LNGGRIVEEG MHDALAAKNG LYVRLMLPHF GKGLRQHRLI
0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYLDPGAE SGGGTGTAAA LAEADEEMDD QDELEPPPAA VPFSQLFACA DRFDWVLMIV GSVAAAAHGT
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
Arabidopsis Description
ABCB20ABC transporter B family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.