CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86445	Canola	plasma membrane	77.78	4.5
CDX85192	Canola	plasma membrane	76.39	4.33
CDY04018	Canola	plasma membrane	70.83	4.11
CDY64952	Canola	peroxisome, plasma membrane, vacuole	45.83	3.35
CDX86408	Canola	plasma membrane	41.67	2.43
CDY00109	Canola	plasma membrane	41.67	2.41
CDY20012	Canola	plasma membrane	41.67	2.39
CDY65012	Canola	plasma membrane	41.67	2.39
CDX84896	Canola	plasma membrane	34.72	2.38
CDY42770	Canola	golgi, plasma membrane, vacuole	30.56	1.94
CDY27639	Canola	plasma membrane	31.94	1.89
CDY35168	Canola	golgi, peroxisome, plasma membrane	27.78	1.83
CDY37953	Canola	plasma membrane	30.56	1.8
CDX93393	Canola	plasma membrane	30.56	1.8
CDX94395	Canola	plasma membrane	30.56	1.78
CDX89380	Canola	plasma membrane	30.56	1.73
CDX92739	Canola	plasma membrane	29.17	1.69
CDY46744	Canola	cytosol, peroxisome, plasma membrane	30.56	1.64
CDX79704	Canola	plasma membrane	30.56	1.64
CDY53591	Canola	cytosol, mitochondrion, plasma membrane	31.94	1.63
CDY48003	Canola	cytosol	26.39	1.59
CDX80072	Canola	cytosol	26.39	1.59
CDY27510	Canola	cytosol	26.39	1.58
CDX67881	Canola	cytosol	26.39	1.58
CDY24958	Canola	mitochondrion, plasma membrane, plastid	30.56	1.58
CDY65312	Canola	cytosol	30.56	1.57
CDX76106	Canola	cytosol, golgi, peroxisome	30.56	1.57
CDY20443	Canola	cytosol, mitochondrion, plasma membrane	30.56	1.57
CDY07647	Canola	cytosol	30.56	1.57
CDY15432	Canola	cytosol	26.39	1.55
CDY37776	Canola	cytosol, peroxisome, plasma membrane	26.39	1.53
CDY51307	Canola	cytosol, peroxisome, plasma membrane	26.39	1.5
CDY25095	Canola	cytosol	25.0	1.49
CDY58790	Canola	peroxisome	25.0	1.46
CDY24379	Canola	plasma membrane	23.61	1.45
CDY20842	Canola	endoplasmic reticulum, golgi, plasma membrane	23.61	1.45
CDY51560	Canola	peroxisome	25.0	1.44
CDX89963	Canola	cytosol, nucleus, plasma membrane	25.0	1.42
CDY15249	Canola	cytosol, peroxisome, plasma membrane	25.0	1.42
Os01t0975900-02	Rice	plasma membrane	4.17	1.19
CDX86442	Canola	cytosol, mitochondrion, plastid	0.0	0.0
CDX86437	Canola	cytosol	0.0	0.0
CDX84897	Canola	cytosol	0.0	0.0
Os01t0976000-01	Rice	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.20.1560.10	MapMan:35.1	GO:A0A078G915	UniProt:A0A078G915	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
EnsemblPlants:CDY21871	ProteinID:CDY21871	ProteinID:CDY21871.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00018176001
InterPro:IPR011527	InterPro:IPR036640	PFAM:PF00664	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF381
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0004EE2900	:	:	:

Description

BnaC01g35770DBnaC01g35770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G915]

Coordinates

chrLK032125:-:420228..420446

Molecular Weight (calculated)

8019.1 Da

IEP (calculated)

10.354

GRAVY (calculated)

0.646

Length

72 amino acids

Sequence
(BLAST)

1: MLWRLAIVGF PFIVLLLIPG LMYGRSLISI TRKIREEYKE AGSIGEQAIS LVRTVYAFGS ETKLIAKFSA AL

Best Arabidopsis Sequence Match ( AT3G28415.1 )
(BLAST)

0001: MKSFGSVRSI FMHANSVDLV LMGLGLIGAV GDGFITPIIF FITGLLLNDI GDSSFGDKTF MHAIMKNAVA LLYVAGASLV ICFVGERQAS RMREKYLRAV
0101: LRQDVGYFDL HVTSTSDVIT SVSSDTLVIQ DVLSEKLPNF LMSASAFVAS YIVGFIMLWR LTIVGFPFFI LLLIPGLMCG RALINISRKI REEYNEAGSI
0201: AEQAISLVRT VYAFGSERKM ISKFSAALEG SVKLGLRQGI AKGIAIGSNG VTYAIWGFMT WYGSRMVMYH GAKGGTIFAV IICITYGGTS LGRGLSNLKY
0301: FSEAVVAGER IIEVIKRVPD IDSDNPRGQV LENIKGEVQF KHVKFMYSSR PETPIFDDLC LRIPSGKSVA LVGGSGSGKS TVISLLQRFY DPIVGEILID
0401: GVSIKKLQVK WLRSQMGLVS QEPALFATSI EENILFGKED ASFDEVVEAA KSSNAHDFIS QFPLGYKTQV GERGVQMSGG QKQRISIARA IIKSPTLLLL
0501: DEATSALDSE SERVVQEALD NATIGRTTIV IAHRLSTIRN VDVICVFKNG QIVETGSHEE LMENVDGQYT SLVRLQIMEN EESNDNVSVS MREGQFSNFN
0601: KDVKYSSRLS IQSRSSLFAT SSIDTNLAGS IPKDKKPSFK RLMAMNKPEW KHALYGCLSA VLYGALHPIY AYASGSMVSV YFLTSHDEMK EKTRIYVLLF
0701: VGLAVLCFLI SIIQQYSFAY MGEYLTKRIR ENILSKLLTF EVSWFDEDEN SSGSICSRLA KDANVVRSLV GERVSLLVQT ISAVSVACTL GLAISWKLSI
0801: VMIAIQPVVV GCFYTQRIVL KSISKKAIKA QDESSKLAAE AVSNIRTITA FSSQERILKL LKMVQEGPQR ENIRQSWLAG IVLATSRSLM TCTSALNYWY
0901: GARLIIDGKI TSKAFFELFI LFVSTGRVIA DAGAMTMDLA KGSDAVGSVF AVLDRYTNIE PEKPDGFVPQ NIKGQIKFVN VDFAYPTRPD VIIFKNFSID
1001: IDEGKSTAIV GPSGSGKSTI IGLIERFYDP LKGIVKIDGR DIRSYHLRSL RQHIGLVSQE PILFAGTIRE NIMYGGASDK IDESEIIEAA KAANAHDFIV
1101: TLSDGYDTYC GDRGVQLSGG QKQRIAIARA VLKNPSVLLL DEATSALDNQ SERMVQDALG RLMVGRTSVV IAHRLSTIQN CDTITVLDKG KVVECGTHSS
1201: LLAKGPTGVY FSLVSLQRTR Y

Arabidopsis Description

ABCB22ABC transporter B family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.