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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025326.1-P Field mustard plasma membrane 99.76 99.76
CDX85192 Canola plasma membrane 97.99 96.06
AT3G28345.1 Thale cress plasma membrane 91.64 91.94
CDY04018 Canola plasma membrane 91.16 91.38
CDX86437 Canola cytosol 10.05 83.89
CDX86442 Canola cytosol, mitochondrion, plastid 4.58 83.82
CDY21871 Canola endoplasmic reticulum, plasma membrane 4.5 77.78
VIT_14s0066g02320.t01 Wine grape peroxisome 71.46 76.84
Zm00001d053706_P002 Maize mitochondrion, plasma membrane 70.02 70.07
OQU84543 Sorghum endoplasmic reticulum, plasma membrane 69.13 69.58
Os02t0190300-01 Rice plasma membrane 69.37 69.32
VIT_19s0085g00060.t01 Wine grape endoplasmic reticulum, plasma membrane, plastid 66.88 67.92
TraesCS4A01G370600.1 Wheat plasma membrane 66.88 67.53
Os02t0190000-00 Rice plasma membrane 67.2 67.26
TraesCS7D01G068400.1 Wheat plasma membrane 66.24 66.88
Os02t0189800-00 Rice mitochondrion 39.95 66.44
EES05229 Sorghum plasma membrane 62.3 62.3
CDX84897 Canola cytosol 5.87 61.86
Zm00001d016794_P001 Maize plasma membrane 61.66 61.07
CDY64952 Canola peroxisome, plasma membrane, vacuole 38.34 48.43
CDY00109 Canola plasma membrane 45.58 45.54
CDY20012 Canola plasma membrane 45.58 45.25
CDY65012 Canola plasma membrane 45.5 45.17
CDX86408 Canola plasma membrane 44.86 45.11
CDY27639 Canola plasma membrane 43.25 44.17
CDX94395 Canola plasma membrane 42.52 42.87
CDY35168 Canola golgi, peroxisome, plasma membrane 37.38 42.62
CDX67881 Canola cytosol 40.92 42.38
CDY25095 Canola cytosol 41.08 42.37
CDY27510 Canola cytosol 40.59 42.12
CDX93393 Canola plasma membrane 41.4 42.04
CDY37953 Canola plasma membrane 41.4 42.04
CDY48003 Canola cytosol 39.95 41.69
CDY15432 Canola cytosol 41.0 41.67
CDY51307 Canola cytosol, peroxisome, plasma membrane 42.2 41.53
CDX80072 Canola cytosol 39.95 41.49
CDX89380 Canola plasma membrane 42.44 41.41
CDY24379 Canola plasma membrane 38.83 41.32
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 38.67 41.04
CDY46744 Canola cytosol, peroxisome, plasma membrane 44.13 41.03
CDX92739 Canola plasma membrane 40.84 40.93
CDY37776 Canola cytosol, peroxisome, plasma membrane 40.84 40.87
CDX79704 Canola plasma membrane 43.97 40.79
CDX89963 Canola cytosol, nucleus, plasma membrane 41.4 40.74
CDY15249 Canola cytosol, peroxisome, plasma membrane 41.32 40.47
CDY58790 Canola peroxisome 39.71 40.13
CDX84896 Canola plasma membrane 33.52 39.68
CDY51560 Canola peroxisome 39.55 39.33
CDY42770 Canola golgi, plasma membrane, vacuole 35.85 39.3
GSMUA_Achr1P18340_001 Banana plasma membrane 61.98 36.85
CDY20443 Canola cytosol, mitochondrion, plasma membrane 38.02 33.76
CDY65312 Canola cytosol 37.94 33.74
CDY24958 Canola mitochondrion, plasma membrane, plastid 37.78 33.69
CDY07647 Canola cytosol 37.94 33.69
CDY53591 Canola cytosol, mitochondrion, plasma membrane 38.02 33.59
CDX76106 Canola cytosol, golgi, peroxisome 37.7 33.5
Protein Annotations
MapMan:24.1.3.1.1Gene3D:3.40.50.300GO:A0A078DB20InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDX86445ProteinID:CDX86445ProteinID:CDX86445.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00144592001InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893
PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF381SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI0004EE7B32SEG:seg:::
Description
BnaA06g31620D
Coordinates
chrLK031845:+:1584836..1591299
Molecular Weight (calculated)
136039.0 Da
IEP (calculated)
8.313
GRAVY (calculated)
0.075
Length
1244 amino acids
Sequence
(BLAST)
0001: MGEVEGKETG KKTMKSFRSI RSIFMHADGV DWVLMGLGLI GAVGDGFTTP LVLLITSKLM NNLGGSSFKT ETFMQSISKN AVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASMFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISSK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSAALQ GSVKLGIRQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAVAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSNNPEGL KLEKVRGEVE FKHVKFVYPS RPETSIFEDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YNPVAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATS IKENILFGKE DATMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVITVVRN GHVVETGSHD ELMDNIDGQY ASLVRLQQIE
0601: KDDSSVNMSV NVQTSPTLDP TKDFRSCSRV STLSRSSSTN SVTGSSIVKN LSKDDKPPLP SFKRLLAMNL PEWKQALYGC ISATLFGAIQ PAYAYSLGSM
0701: VSVYFLTSHD EIKEKTRIYA LSFVGLAVLS FLINISQHYN FAYMGEYLTK RVRERMLSKV LTFEVGWFDR DENSSGAICS RLAKDANVVR SLVGDRMALL
0801: VQTISAVTIA CTMGLVIAWR LALVMIAVQP LIIVCFYTRR VLLKNMSKKA IKAQDESSKL AAEAVSNVRT ITAFSSQERI MKMLEKAQEN PRRESIRQSW
0901: FAGIGLAMSQ SLTTCTWALD FWYGGRLIED GYITAKALFE TFMILVSTGR VIADAGSMTT DLAKGSDAVG SVFAVLDRYT SIDPEDPEGY EPERLTGRVE
1001: FLNVDFSYPT RPDVMIFSDF SIDIDAAKST AIVGPSGSGK STVIGLIERF YDPVKGVVKI DGRDLRSYNL RSLRQHIALV SQEPTLFAGT IRENIVYGRA
1101: SDNIDESEII EAARAANAHD FITSLTDGYD TYCGDRGVQL SGGQKQRIAI ARAVLKNPSL LLLDEATSAL DSQSERVVQD ALERVMVGRT SVVIAHRLST
1201: IQNCDAIAVL DKGKLVERGT HSSLLAKGST GVYFSLVSLQ RTTC
Best Arabidopsis Sequence Match ( AT3G28345.1 )
(BLAST)
0001: MGKEEEKESG RNKMNCFGSV RSIFMHADGV DWLLMGLGLI GAVGDGFTTP LVLLITSKLM NNIGGSSFNT DTFMQSISKN SVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG
Arabidopsis Description
ABCB15ABC transporter B family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHD1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.