Factsheet for Bra025326.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86445	Canola	plasma membrane	99.76	99.76
AT3G28345.1	Thale cress	plasma membrane	91.4	91.69
VIT_14s0066g02320.t01	Wine grape	peroxisome	71.3	76.66
Bra025328.1-P	Field mustard	endoplasmic reticulum, golgi	64.39	74.93
Bra025331.1-P	Field mustard	plasma membrane	67.44	73.66
Zm00001d053706_P002	Maize	mitochondrion, plasma membrane	69.77	69.83
OQU84543	Sorghum	endoplasmic reticulum, plasma membrane	68.89	69.34
Os02t0190300-01	Rice	plasma membrane	69.13	69.08
VIT_19s0085g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	66.8	67.84
TraesCS4A01G370600.1	Wheat	plasma membrane	66.64	67.29
Os02t0190000-00	Rice	plasma membrane	66.96	67.02
TraesCS7D01G068400.1	Wheat	plasma membrane	66.0	66.64
Os02t0189800-00	Rice	mitochondrion	39.87	66.31
Bra032855.1-P	Field mustard	cytosol	5.95	62.71
EES05229	Sorghum	plasma membrane	62.14	62.14
Zm00001d016794_P001	Maize	plasma membrane	61.5	60.91
Bra025425.1-P	Field mustard	peroxisome, plasma membrane, vacuole	49.36	49.48
Bra039042.1-P	Field mustard	plasma membrane	45.5	45.21
Bra025359.1-P	Field mustard	plasma membrane	45.18	44.89
Bra032856.1-P	Field mustard	plasma membrane	43.89	44.07
Bra012621.1-P	Field mustard	plasma membrane	43.09	42.98
Bra013936.1-P	Field mustard	plasma membrane	42.28	42.63
Bra019907.1-P	Field mustard	plasma membrane	41.08	41.71
Bra019135.1-P	Field mustard	plasma membrane	41.56	41.66
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.2	41.14
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	42.6	41.02
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	44.05	40.93
Bra040475.1-P	Field mustard	cytosol	42.04	40.64
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.19	40.62
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	43.57	40.51
Bra003445.1-P	Field mustard	peroxisome	40.68	40.35
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	41.0	40.28
Bra004484.1-P	Field mustard	cytosol	41.56	40.26
Bra017539.1-P	Field mustard	plasma membrane	30.71	37.05
GSMUA_Achr1P18340_001	Banana	plasma membrane	61.82	36.76
Bra000136.1-P	Field mustard	cytosol, mitochondrion, peroxisome	37.86	33.57
Bra005036.1-P	Field mustard	mitochondrion	37.94	33.52
Bra014756.1-P	Field mustard	cytosol, golgi, peroxisome	37.7	33.5

Protein Annotations

MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra025326	EnsemblPlants:Bra025326.1	EnsemblPlants:Bra025326.1-P	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527
InterPro:IPR036640	UniProt:M4E970	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF381	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI000253FBC8	SEG:seg	:	:

Description

AT3G28345 (E=0.0) | ABC transporter family protein

Coordinates

chrA06:+:22154093..22159409

Molecular Weight (calculated)

135989.0 Da

IEP (calculated)

8.313

GRAVY (calculated)

0.070

Length

1244 amino acids

Sequence
(BLAST)

0001: MGEVEGKETG KKTMKSFRSI RSIFMHADGV DWVLMGLGLI GAVGDGFTTP LVLLITSKLM NNLGGSSFKT ETFMQSISKN AVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSPSDVI TSVSSDSFVI QDVLSEKLPN FLMSASMFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISSK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSAALQ GSVKLGIRQG LAKGITIGSN GIPFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAVAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSNNPEGL KLEKVRGEVE FKHVKFVYPS RPETSIFEDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YNPVAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATS IKENILFGKE DATMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVITVVRN GHVVETGSHD ELMDNIDGQY ASLVRLQQIE
0601: KDDSSVNMSV NVQTSPTLDP TKDFRSCSRV STLSRSSSTN SVTGSSIVKN LSKDDKPPLP SFKRLLAMNL PEWKQALYGC ISATLFGAIQ PAYAYSLGSM
0701: VSVYFLTSHD EIKEKTRIYA LSFVGLAVLS FLINISQHYN FAYMGEYLTK RVRERMLSKV LTFEVGWFDR DENSSGAICS RLAKDANVVR SLVGDRMALL
0801: VQTISAVTIA CTMGLVIAWR LALVMIAVQP LIIVCFYTRR VLLKNMSKKA IKAQDESSKL AAEAVSNVRT ITAFSSQERI MKMLEKAQEN PRRESIRQSW
0901: FAGIGLAMSQ SLTTCTWALD FWYGGRLIED GYITAKALFE TFMILVSTGR VIADAGSMTT DLAKGSDAVG SVFAVLDRYT SIDPEDPEGY EPERLTGRVE
1001: FLNVDFSYPT RPDVMIFSDF SIDIDAAKST AIVGPSGSGK STVIGLIERF YDPVKGVVKI DGRDLRSYNL RSLRQHIALV SQEPTLFAGT IRENIVYGRA
1101: SDNIDESEII EAARAANAHD FITSLTDGYD TYCGDRGGQL SGGQKQRIAI ARAVLKNPSL LLLDEATSAL DSQSERVVQD ALERVMVGRT SVVIAHRLST
1201: IQNCDAIAVL DKGKLVERGT HSSLLAKGST GVYFSLVSLQ RTTC

Best Arabidopsis Sequence Match ( AT3G28345.1 )
(BLAST)

0001: MGKEEEKESG RNKMNCFGSV RSIFMHADGV DWLLMGLGLI GAVGDGFTTP LVLLITSKLM NNIGGSSFNT DTFMQSISKN SVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG

Arabidopsis Description

ABCB15ABC transporter B family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.