Factsheet for Bra002094.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24379	Canola	plasma membrane	90.17	94.95
Bra003445.1-P	Field mustard	peroxisome	92.04	90.35
AT4G01830.1	Thale cress	golgi, plasma membrane, vacuole	82.37	82.44
AT4G01820.1	Thale cress	peroxisome, plasma membrane, vacuole	81.97	82.1
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	77.82	75.08
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	77.17	75.04
Os05t0137200-01	Rice	plasma membrane	22.18	69.47
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	62.06	69.08
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.49	67.85
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	69.62	66.85
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	70.11	66.8
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	69.37	66.61
Bra004484.1-P	Field mustard	cytosol	69.46	66.59
Bra040475.1-P	Field mustard	cytosol	69.37	66.36
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	69.21	66.2
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	68.81	66.02
GSMUA_Achr1P25070_001	Banana	plasma membrane	47.77	64.9
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	67.51	64.47
OQU77362	Sorghum	mitochondrion, plasma membrane	59.06	63.0
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	61.98	62.95
KXG32330	Sorghum	plastid	64.74	62.27
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	64.58	62.21
Bra012621.1-P	Field mustard	plasma membrane	61.58	60.79
Solyc06g009290.2.1	Tomato	nucleus	68.89	60.57
TraesCS1A01G081300.1	Wheat	unclear	62.23	60.03
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	61.98	59.84
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	61.98	59.8
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	64.74	59.7
HORVU1Hr1G017460.3	Barley	plasma membrane	61.82	59.31
Bra032855.1-P	Field mustard	cytosol	5.61	58.47
GSMUA_Achr9P16700_001	Banana	plasma membrane	58.9	57.09
Bra017539.1-P	Field mustard	plasma membrane	45.0	53.73
Bra039042.1-P	Field mustard	plasma membrane	43.95	43.21
Bra019907.1-P	Field mustard	plasma membrane	42.65	42.86
Bra025359.1-P	Field mustard	plasma membrane	43.54	42.81
Bra013936.1-P	Field mustard	plasma membrane	42.57	42.46
Bra019135.1-P	Field mustard	plasma membrane	42.65	42.3
Bra032856.1-P	Field mustard	plasma membrane	41.75	41.49
Bra025326.1-P	Field mustard	plasma membrane	40.62	40.19
Bra025328.1-P	Field mustard	endoplasmic reticulum, golgi	34.36	39.57
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	42.89	39.46
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	42.49	39.06
Bra025331.1-P	Field mustard	plasma membrane	36.07	38.98
Bra025425.1-P	Field mustard	peroxisome, plasma membrane, vacuole	38.02	37.71
Bra005036.1-P	Field mustard	mitochondrion	37.86	33.1
Bra000136.1-P	Field mustard	cytosol, mitochondrion, peroxisome	37.45	32.86
Bra014756.1-P	Field mustard	cytosol, golgi, peroxisome	36.72	32.29

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra002094	EnsemblPlants:Bra002094.1	EnsemblPlants:Bra002094.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M4CD13
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929
PANTHER:PTHR24221	PANTHER:PTHR24221:SF292	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix
UniParc:UPI0002543D11	SEG:seg	:	:	:	:

Description

AT4G01830 (E=0.0) PGP5 | PGP5 (P-GLYCOPROTEIN 5); ATPase, coupled to transmembrane movement of substances

Coordinates

chrA10:+:11533144..11538864

Molecular Weight (calculated)

133903.0 Da

IEP (calculated)

7.677

GRAVY (calculated)

0.185

Length

1231 amino acids

Sequence
(BLAST)

0001: MVDVSRFETS HVHSRSPTQL EMKKGIIEEK AKTVPFYKLF SFSDSTDVLL MIVGSIGAIG NGLGFPLMTL LFGDLIDTVG RRNLFTNDIV ELISKICLKF
0101: VYLGLGTFVA AFLQVSCWVI TGERQAARIR SLYLKTILRQ DIVFFDVETN TGEVVGRMSG DTVLILDAMG EKVGKFIQLF VTFLGGYALA FVKGWLLTLV
0201: MLTSIPLLAM AGAAMSLIFT KASSQQQAAY AKASTIVEQT CGSIRTVASF TGEKQATSSY KELINSAYKS SVKQGLSNGL GFGVMFLVFF CSYALAIWFG
0301: GEMILRKGYT GQAAPCLTSF AAGQAAAYKM FETIKRKPVI DSLDLNGKVL EDIQGEIELR DVCFSYPARP REEVFGGFSL MIPSGKTTAL VGESGSGKST
0401: VISLIERFYD PSSGQVLIDG VDLKEFQLKW IRGKIGLVGQ EPVLFSSSIM ENIGYGKEGA RVQEIEAAAK LANAAKFIDK LPRGLDTMVG EHGTQLSGGQ
0501: KQRIAIARAI LKDPRILLLD EATSALDAES ERVVQQALDR VMVNRTTLIV AHRLSTVRNA DMIAVLHRGK IVEEGSHLEL LKDHEGAYSQ LIRLQEINTE
0601: SRRLEISNGS IRNESSRGNG VSRMHNDDES VSVAGQENTE KPKEMPQDVS ITRIAALNKP EAPILILGTL VCALDGAIFP IFGLLFAKVI IAFFQPPHEL
0701: RSDSRFWSII FVLLGVLSLV VYPIHMSLFA VAGGRLIRRI RSMCFEKVVH MEVGWFDEPE NSSGAMGARL SADAALIRTL VGDSLALTVK NVASAVAGII
0801: IAFAISWELA VIILVMIPLT GINNYVQVKF MKGFSADAKT KYEEASQVAN DAVGSIRTVA SFCAEEKVIE MYKKRCEDSI KSGTKQGVVA GLGFGLSFFV
0901: LYSVYAACFY AGARLVKDGR TTYNGVFQVF LALTMTTIGI SAASSFAPDS SKAKSAAASV FGIIDRKSKI DSRDESGMVL ENVKGDIDFC HIEFAYQTRP
1001: DIQIFRDLCF SIRAGKTVAL VGESGSGKST VISLLQRFYD PDSGHITLDG VELKKLQLKW LRKQMGLVGQ EPVLFNDTIR ANIAYGKGGE EATEAEIVAA
1101: SELCNAHKFI SSIQQGYDTV VGERGIQLSG GQKQRVAIAR AIVKEPKILL LDEATSALDA ESERVVQDAL DQVMVNRTTI VVAHRLSTIK NADVIAVVKN
1201: GVIAEKGTHE TLMNIEGGVY ASLVQLHMSA F

Best Arabidopsis Sequence Match ( AT4G01830.1 )
(BLAST)

0001: MKKGNLEANT KTVPFYKLFF FSDSTDVLLM IVGSIGAIAN GVCSPLMTLL FGELIDAMGP NQNNEEIVER VSKVCLSLVY LGLGALGAAF LQVACWMITG
0101: ERQAARIRSL YLKTILRQDI GFFDVEMTTG EVVGRMSGDT VLILDAMGEK VGKFIQLIST FVGGFVIAFL RGWLLTLVML TSIPLLAMSG AAIAIIVTRA
0201: SSQEQAAYAK ASNVVEQTLG SIRTVASFTG EKQAMSSYKE LINLAYKSNV KQGFVTGLGL GVMFLVFFST YALGTWFGGE MILRKGYTGG AVINVMVTVV
0301: SSSIALGQAS PCLTAFTAGK AAAYKMFETI EREPLIDTFD LNGKVLEDIR GEIELRDVCF SYPARPKEEV FGGFSLLIPS GTTTALVGES GSGKSTVISL
0401: IERFYDPNSG QVLIDGVDLK EFQLKWIRGK IGLVSQEPVL FSSSIMENIG YGKEGATVEE IQAASKLANA AKFIDKLPLG LETLVGEHGT QLSGGQKQRI
0501: AIARAILKDP RILLLDEATS ALDAESERVV QEALDRIMVN RTTVIVAHRL STVRNADIIA VIHRGKIVEE GSHSELLKDH EGAYSQLLRL QEINKESKRL
0601: EISDGSISSG SSRGNNSTRQ DDDSFSVLGL LAGQDSTKMS QELSQKVSFT RIAALNKPEI PILILGTLVG AVNGTIFPIF GILFAKVIEA FFKAPHELKR
0701: DSRFWSMIFV LLGVAAVIVY PTTNYLFAIA GGRLIRRIRS MCFEKVVHME VGWFDEPGNS SGAMGARLSA DAALIRTLVG DSLCLSVKNV ASLVTGLIIA
0801: FTASWEVAII ILVIIPFIGI NGYIQIKFMK GFSADAKAKY EEASQVANDA VGSIRTVASF CAEEKVMEMY KKRCEDTIKS GIKQGLISGV GFGISFFVLY
0901: SVYASCFYVG ARLVKAGRTN FNDVFQVFLA LTLTAVGISQ ASSFAPDSSK GKGAAVSIFR IIDRISKIDS RDESGMVLEN VKGDIELCHI SFTYQTRPDV
1001: QVFRDLCLSI RAGQTVALVG ESGSGKSTVI SLLQRFYDPD SGHITLDGVE LKKLRLKWLR QQMGLVGQEP VLFNDTIRAN IAYGKGGEEA TEAEIIAASE
1101: LANAHRFISS IQKGYDTVVG ERGIQLSGGQ KQRVAIARAI VKEPKILLLD EATSALDAES ERVVQDALDR VMVNRTTIVV AHRLSTIKNA DVIAVVKNGV
1201: IAEKGTHETL INIEGGVYAS LVQLHINASN

Arabidopsis Description

ABCB5ABC transporter B family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYI3]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.