CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	84.41	84.48
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	83.79	83.85
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	77.24	76.41
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	63.91	74.14
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	73.27	73.04
CDY25095	Canola	cytosol	68.59	72.97
CDX67881	Canola	cytosol	68.12	72.77
CDY27510	Canola	cytosol	67.97	72.73
CDY48003	Canola	cytosol	67.26	72.4
CDX80072	Canola	cytosol	67.58	72.37
Os05t0137200-01	Rice	plasma membrane	22.14	72.26
AT1G02520.1	Thale cress	cytosol, peroxisome, plasma membrane	71.55	71.83
CDX89963	Canola	cytosol, nucleus, plasma membrane	70.69	71.76
CDY15249	Canola	cytosol, peroxisome, plasma membrane	70.69	71.42
GSMUA_Achr1P25070_001	Banana	plasma membrane	50.43	71.41
CDY51307	Canola	cytosol, peroxisome, plasma membrane	70.3	71.36
Bra004484.1-P	Field mustard	cytosol	71.4	71.34
CDY15432	Canola	cytosol	68.04	71.32
KRH02481	Soybean	plasma membrane	70.77	71.22
CDY37776	Canola	cytosol, peroxisome, plasma membrane	68.98	71.2
KRH19486	Soybean	cytosol, peroxisome, plasma membrane	70.62	71.11
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	71.4	71.06
AT4G01820.1	Thale cress	peroxisome, plasma membrane, vacuole	68.04	71.03
Bra040475.1-P	Field mustard	cytosol	71.24	71.02
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	70.62	71.0
AT2G47000.1	Thale cress	cytosol, peroxisome, plasma membrane	70.93	70.76
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	69.6	70.54
AT3G62150.2	Thale cress	cytosol, nucleus, plasma membrane	71.24	70.52
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	71.01	70.51
AT4G01830.1	Thale cress	golgi, plasma membrane, vacuole	67.5	70.41
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	66.41	70.3
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.02	68.81
CDY24379	Canola	plasma membrane	62.67	68.78
CDY20842	Canola	endoplasmic reticulum, golgi, plasma membrane	62.67	68.6
OQU77362	Sorghum	mitochondrion, plasma membrane	61.65	68.54
KXG32330	Sorghum	plastid	67.19	67.34
Bra003445.1-P	Field mustard	peroxisome	65.78	67.3
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	67.03	67.29
KRH02482	Soybean	cytosol, peroxisome, plasma membrane	68.28	67.23
CDY58790	Canola	peroxisome	64.38	67.1
Solyc06g009290.2.1	Tomato	nucleus	72.64	66.57
CDY51560	Canola	peroxisome	64.38	66.03
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	65.24	65.65
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	65.0	65.36
TraesCS1A01G081300.1	Wheat	unclear	65.0	65.36
KRH19480	Soybean	plasma membrane	61.42	65.34
HORVU1Hr1G017460.3	Barley	plasma membrane	65.0	65.0
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	66.95	64.34
KRH02484	Soybean	plasma membrane	63.29	64.14
KRH19479	Soybean	plasma membrane	63.91	63.13
KRH21125	Soybean	plasma membrane	61.65	62.73
KRH11119	Soybean	plasma membrane	60.41	62.15
GSMUA_Achr9P16700_001	Banana	plasma membrane	61.03	61.65
KRH45417	Soybean	plasma membrane	43.26	44.26
KRH18485	Soybean	endoplasmic reticulum, mitochondrion	42.71	43.88
KRH39563	Soybean	peroxisome	42.56	43.86
KRH74394	Soybean	plasma membrane	42.56	43.82
KRG93519	Soybean	cytosol, peroxisome, plasma membrane	42.63	43.76
KRH05968	Soybean	plasma membrane	40.84	41.92
KRH17450	Soybean	plasma membrane	40.61	41.68
KRH32507	Soybean	cytosol, nucleus, plasma membrane	42.4	40.51
KRG96023	Soybean	cytosol, peroxisome, plasma membrane	42.24	40.48
KRH67730	Soybean	cytosol, peroxisome, plasma membrane	42.32	40.46
KRH19897	Soybean	cytosol, peroxisome, plasma membrane	42.09	40.27
KRH53669	Soybean	plasma membrane	37.49	38.36
KRG92957	Soybean	nucleus	37.18	34.1
KRH70512	Soybean	extracellular	37.1	33.95
KRH01590	Soybean	mitochondrion	37.02	33.88
KRH36206	Soybean	cytosol, golgi, plastid	36.79	33.74
KRH06234	Soybean	peroxisome, plastid	38.35	32.48

Protein Annotations

Gene3D:1.20.1560.10	EntrezGene:100802547	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:ACUP02002107	EnsemblPlantsGene:GLYMA_03G224100	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	UniProt:I1JQW9	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640
EnsemblPlants:KRH68334	ProteinID:KRH68334	ProteinID:KRH68334.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF290	SMART:SM00382
SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI000296CE6A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:42642943..42648881

Molecular Weight (calculated)

139488.0 Da

IEP (calculated)

8.243

GRAVY (calculated)

0.103

Length

1283 amino acids

Sequence
(BLAST)

0001: MMSDMMRHEN GLQDEELKHD ERTEQESSTK VEKREKRQQK EKVETVPYHK LFLFADSTDI ILVVVGTIGA IGNGLGMPLM TLLFGELIDS FGNNQFGSDV
0101: VKQVSKVCLK FVYLGIGTGL AAFLQVTCWT VTGERQAARI RGLYLKTILR QDIAFFDKET NTGEVIGRMS GDTLLIQDAM GEKVGRFLQL VATFFGGFVI
0201: AFIKGWLLTV VMLSVVPLVA AAGATMAFII GMMATRGQSA YAKASHVVEE TIGSIRTVAS FTGEKQAVSS YKKFLADAYQ SGVHEGFVGG MGLGVVMLVM
0301: FCGYALSVWF GAKMIMEKGY SAGAVVNVFV AVLNASMSLG QASPSISAFA AGQAAAYKMF QTIERKPEID AYDPNGKILE DIHGEIHLRD VYFSYPARPE
0401: ELIFNGFSLH IPSGTTAALV GQSGSGKSTV ISLIERFYDP QAGEVLIDGT NVKEFQLRWI RGKIGLVSQE PVLFASSIKD NIAYGKEGAM VEEIRAAAEL
0501: ANAAKFIDKL PQGLDTMVGE HGTQLSGGQK QRIAIARAIL KDPRILLLDE ATSALDAESE RIVQEALDRI MVNRTTVIVA HRLSTVRNAD MIAVIHRGKM
0601: VEKGTHVELT KDPEGAYSQL IHLQEGNKES EETRDNQNKR ELSSESFTKL SQRRSLRRSG SSMGNSSRHS FSVSFGLPIG VNIPDPELEY SQPQEKSPEV
0701: PLRRLASLNK PEIPVLLIGC VAAIANGTIF PIFGVLLSSV IKTFFKPFPE MKKDSKFWAL MFVTLGFGSL LAIPARSYFF AMAGSKLIRR IRLICFEKVI
0801: NMEVGWFDEP EHSSGAIGAR LSADAASVRA LVGDALGLLV QNIATALAGL IIAFVASWQL AFILLVLVPL IGINGYIQMK FMKGSNADAK MMYEEASQVA
0901: NDAVGSIRTV ASFCAEEKVM ELYRKKCEGP MQAGIRQGLI SGTGFGVSFF LLFSVYATNF YAGARFVEAG KASFTDVFRV FFALTMASIG ISQSSSLAPD
1001: SNKAKIATAS IFSIIDGKSK IDPSDEFGDT VDSVKGEIQI RHVSFKYPSR PDIQIFRDLS LTIHSGKTVA LVGESGSGKS TVIALLQRFY DPDSGQITLD
1101: GIEIQNLKLK WLRQQMGLVS QEPVLFNATI RANIAYGKKG NETEAEIITA AKLANAHGFI SGLQQGYDTV VGERGIQLSG GQKQRVAIAR AIIKSPKILL
1201: LDEATSALDA ESERVVQDAL DKVMVSRTTV VVAHRLSTIK NADVIAVVKN GVIVEKGRHE TLINIKDGFY ASLVQLHTSA TTA

Best Arabidopsis Sequence Match ( AT1G02520.3 )
(BLAST)

0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN

Arabidopsis Description

ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.